lineage | Count |
---|---|
lineage4 | 23 |
21 | |
lineage4.9 | 26 |
lineage4.3.4.2.1 | 3 |
lineage4.3.2.1 | 1 |
lineage2.2.1 | 7 |
lineage4.4.1.2 | 1 |
lineage4.1.2.1 | 1 |
lineage2.2 | 2 |
La1.8.1 | 2 |
lineage4;lineage3.1 | 1 |
lineage3 | 3 |
La1.3 | 1 |
lineage2.2.2 | 1 |
lineage4.4.1.1.1 | 1 |
lineage4.3.4 | 1 |
lineage4.6.5 | 2 |
lineage4.3.4.2 | 1 |
lineage6 | 1 |
lineage3.1.3 | 1 |
La1.7.1 | 1 |
lineage2.1 | 1 |
lineage4;lineage2 | 1 |
lineage4.8 | 1 |
lineage4.3.3 | 1 |
lineage1.1.1 | 1 |
lineage4.2.1 | 1 |
spoligotype | Count |
---|---|
None | 107 |
ID | Drug resistance | Lineage | Country iso2 | SRR6982246 | Sensitive | lineage4 | None | SRR6046460 | HR-TB | None | ERR323035 | Sensitive | lineage4.9 | None | ERR11466014 | Sensitive | lineage4.3.4.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323045 | HR-TB | None | ERR067712 | HR-TB | lineage4 | None | ERR323108 | HR-TB | lineage4 | None | ERR11465232 | Sensitive | lineage4.1.2.1 | None | ERR1023525 | HR-TB | lineage4 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063857 | HR-TB | None | ERR1063862 | HR-TB | None | ERR1063858 | HR-TB | None | ERR1063859 | HR-TB | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR3283025 | HR-TB | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3445501 | HR-TB | None | ERR405209 | Sensitive | lineage4 | None | ERR3445502 | HR-TB | lineage4 | None | ERR3445503 | HR-TB | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3797086 | Other | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4188247 | HR-TB | None | ERR4596902 | HR-TB | lineage3 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769436 | Other | La1.3 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR4769530 | RR-TB | lineage4.9 | None | ERR4796351 | MDR-TB | lineage4.9 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4769521 | HR-TB | None | ERR6866807 | HR-TB | lineage4 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR6358951 | HR-TB | lineage4 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6359070 | Other | lineage4.9 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR6359074 | HR-TB | lineage4.9 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | ERR736848 | HR-TB | None | ERR9119669 | HR-TB | None | ERR9786076 | Sensitive | lineage3 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736875 | HR-TB | lineage4 | None | ERR7801175 | RR-TB | lineage4.6.5 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR9786346 | Sensitive | lineage4.3.4.2 | None | ERR9787030 | Sensitive | lineage6 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR11462861 | Other | La1.8.1 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR16157123 | Other | lineage4.9 | None | SRR1196545 | HR-TB | lineage4.9 | None | ERR176779 | HR-TB | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | ERR176778 | HR-TB | None | ERR4814639 | HR-TB | lineage4 | None | ERR176651 | HR-TB | None | ERR181824 | HR-TB | lineage4 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | ERR212125 | HR-TB | lineage4 | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR181887 | HR-TB | None | ERR212138 | HR-TB | lineage4 | None | ERR4818536 | Other | lineage4.9 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4818561 | HR-TB | lineage4 | None | SRR5341373 | HR-TB | lineage4 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR4819314 | Other | lineage1.1.1 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341432 | HR-TB | lineage4 | None | ERR4819462 | Other | lineage4 | None | ERR4819546 | HR-TB | lineage3 | None | SRR5341315 | Sensitive | None | SRR5341293 | HR-TB | lineage4 | None | ERR1023509 | Other | None | SRR5341313 | HR-TB | None | SRR6046362 | HR-TB | None | SRR6046141 | Other | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR6045832 | HR-TB | lineage4.9 | None | ERR2851356 | Sensitive | lineage4.9 | None |
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