Rv0667 - c.2469C>G
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
34 Sensitive
7 RR-TB
45 HR-TB
7 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
22 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 61 |
| lineage4.3.2.1 | 2 |
| lineage1.1.1 | 1 |
| lineage4.3.4 | 1 |
| lineage2.2.2 | 1 |
| lineage4.1.1.3 | 1 |
| La1.7;lineage4.9;lineage7 | 3 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| lineage2.2.1 | 9 |
| La1.7;lineage4.9 | 6 |
| La2;lineage4.9 | 1 |
| La1.3 | 1 |
| lineage1.2.2.2 | 1 |
| lineage4.1.2.1 | 1 |
| lineage3 | 3 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage4.9;lineage7 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| 1 | |
| La2;lineage2.2 | 1 |
| lineage4.6.5 | 2 |
| lineage1;lineage4.9 | 1 |
| lineage4.3.4.2.1 | 3 |
| La1.7.1;La1.7.X-unk4 | 1 |
| M.canetti;lineage1 | 1 |
| lineage6 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| La1.8.1 | 1 |
| lineage4.3.3 | 1 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| lineage3.1.3 | 1 |
| lineage4.8 | 1 |
| lineage4.4.1.2 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
| La1.7.1;lineage4.9 | 1 |
| La1.7.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 119 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4818536 | Other | lineage4.9 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR4819462 | Sensitive | lineage4.9 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | ERR4769530 | RR-TB | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | ERR926155 | Sensitive | lineage4.9 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR926157 | Sensitive | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR9119669 | HR-TB | lineage4.9 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | ERR4188247 | HR-TB | lineage4.9 | None | SRR5341432 | Sensitive | La1.7;lineage4.9;lineage7 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR926162 | Sensitive | lineage4.9 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | ERR067712 | Sensitive | lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | ERR4769508 | RR-TB | lineage4.9 | None | ERR6359066 | HR-TB | lineage4.9 | None | ERR926160 | Sensitive | lineage4.9 | None | SRR29096879 | Sensitive | lineage4.9 | None | ERR4769436 | Other | La1.3 | None | ERR4810624 | HR-TB | lineage2.2.1 | None | SRR22424787 | Sensitive | lineage4.9 | None | SRR29096174 | Sensitive | La1.7;lineage4.9 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | SRR12708392 | Other | lineage2.2.1 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR926163 | Other | lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR176779 | HR-TB | lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None | ERR926154 | Sensitive | lineage4.9 | None | ERR6358951 | Sensitive | lineage4.9 | None | ERR11465232 | Sensitive | lineage4.1.2.1 | None | ERR4819546 | HR-TB | lineage3 | None | ERR1023509 | Other | lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR9971112 | Other | lineage2.2.1 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR6359070 | Sensitive | lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | SRR6045832 | Other | lineage4.9 | None | ERR3797029 | Other | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR5341373 | Other | lineage4.9 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR4798823 | HR-TB | None | ERR473323 | HR-TB | lineage4.9 | None | SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | ERR7801175 | HR-TB | lineage4.6.5 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | ERR108125 | RR-TB | lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR323044 | HR-TB | lineage4.3.4.2.1 | None | ERR926158 | Sensitive | lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | SRR15014655 | Other | M.canetti;lineage1 | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | ERR9787030 | Sensitive | lineage6 | None | ERR9786346 | Sensitive | lineage4.3.4.2 | None | ERR9786076 | Sensitive | lineage3 | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | ERR212138 | HR-TB | lineage4.9 | None | ERR3797073 | Other | La1.8.1 | None | ERR971389 | Sensitive | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | ERR3797086 | Sensitive | lineage4.9 | None | ERR212125 | HR-TB | lineage4.9 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | ERR181824 | HR-TB | lineage4.9 | None | ERR926156 | Sensitive | lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | ERR926165 | Sensitive | lineage4.9 | None | ERR6866807 | Other | lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR176651 | Other | lineage4.9 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR176741 | Other | lineage4.9 | None | ERR736848 | Other | lineage4.9 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | ERR4596902 | MDR-TB | lineage3 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR6359074 | HR-TB | lineage4.9 | None | SRR10315558 | Sensitive | lineage2.2.1 | None | ERR4814639 | HR-TB | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR11466014 | Sensitive | lineage4.3.4.2.1 | None | SRR1196545 | Sensitive | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None |
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