lineage | Count |
---|---|
28 | |
lineage2.2.1 | 4 |
lineage4.3.4.2.1 | 1 |
lineage4 | 25 |
lineage4.3 | 1 |
lineage4.9 | 7 |
lineage2.1 | 1 |
lineage4.1.1.3 | 2 |
lineage2.2 | 6 |
lineage4.4.1.2 | 1 |
lineage4;lineage3.1 | 1 |
lineage1.2.2.1 | 1 |
lineage4.3.4 | 1 |
lineage3 | 2 |
La3 | 1 |
spoligotype | Count |
---|---|
None | 82 |
ID | Drug resistance | Lineage | Country iso2 | ERR176778 | HR-TB | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675510 | Other | None | ERR161034 | Other | lineage4.3.4.2.1 | None | ERR181887 | HR-TB | None | ERR176651 | HR-TB | None | SRR3675312 | HR-TB | lineage4 | None | ERR176779 | HR-TB | None | ERR181824 | HR-TB | lineage4 | None | ERR176568 | Other | lineage4.3 | None | ERR176643 | HR-TB | None | ERR176740 | HR-TB | None | ERR176751 | HR-TB | None | SRR3675541 | Sensitive | lineage4.9 | None | ERR4816656 | HR-TB | None | ERR212001 | HR-TB | None | ERR212033 | HR-TB | None | ERR212125 | HR-TB | lineage4 | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR212138 | HR-TB | lineage4 | None | ERR4818929 | HR-TB | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341373 | HR-TB | lineage4 | None | ERR2515312 | Sensitive | lineage4.1.1.3 | None | SRR5341313 | HR-TB | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341315 | Sensitive | None | ERR4821486 | Other | lineage2.2 | None | ERR2693227 | Other | lineage4.9 | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046259 | Sensitive | lineage4.9 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR502943 | HR-TB | None | SRR6896256 | Sensitive | lineage4.1.1.3 | None | SRR8217918 | HR-TB | None | ERR323039 | HR-TB | None | ERR323045 | HR-TB | None | ERR1034634 | HR-TB | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323108 | HR-TB | lineage4 | None | ERR067699 | HR-TB | lineage4 | None | ERR323053 | HR-TB | None | ERR1023525 | HR-TB | lineage4 | None | ERR1063862 | HR-TB | None | ERR1063859 | HR-TB | None | ERR1063858 | HR-TB | None | ERR133825 | Sensitive | lineage4 | None | ERR3445501 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363445 | Sensitive | lineage4 | None | ERR3445503 | HR-TB | None | ERR363446 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369162 | Sensitive | lineage4 | None | ERR405209 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR4811030 | Sensitive | None | ERR473332 | Other | lineage4 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4769474 | HR-TB | lineage4 | None | ERR7821210 | Sensitive | lineage1.2.2.1 | None | ERR736865 | HR-TB | None | ERR736875 | HR-TB | lineage4 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR9896144 | Other | lineage3 | None | SRR1169249 | Other | La3 | None | SRR1167384 | Other | lineage4 | None | ERR990545 | Other | lineage3 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1174897 | HR-TB | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1183049 | Other | lineage2.2 | None |
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