EBG00000313339 - n.1875A>G
Drug resistance types
19 Sensitive
5 RR-TB
53 HR-TB
13 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
49 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.1.2.1 | 4 |
| lineage4.5 | 3 |
| lineage1.1.2 | 1 |
| lineage3 | 9 |
| lineage4.9 | 29 |
| lineage4 | 17 |
| lineage4.3.4.2 | 5 |
| 39 | |
| lineage4.8 | 3 |
| lineage4.6.2.2 | 4 |
| lineage4.2.1 | 1 |
| lineage1.1.3.3 | 1 |
| lineage4.8;lineage3 | 1 |
| lineage4.4.1.1 | 1 |
| lineage3.1.1 | 1 |
| lineage4.6.5 | 1 |
| lineage4.6.1.1 | 1 |
| lineage2.2 | 2 |
| lineage4.1.1.3 | 1 |
| La1.8.1 | 1 |
| La1.3 | 1 |
| La1 | 1 |
| lineage2.2.1 | 3 |
| lineage4.3.4 | 2 |
| lineage4.3 | 1 |
| lineage1.2.2.2 | 1 |
| lineage6 | 1 |
| La2 | 1 |
| lineage1.1.1 | 1 |
| lineage2.2.1.1 | 1 |
| La1.7.1 | 1 |
| lineage4.4.2 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage1.2.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 142 |
Geographic prevalence
Country level data for this variant is available for 8 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4816782 | Other | lineage4.1.2.1 | None | SRR1723916 | MDR-TB | lineage4.5 | cn | SRR7898221 | MDR-TB | lineage1.1.2 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR2512994 | Other | lineage3 | gb | ERR4817915 | RR-TB | lineage4.9 | None | ERR4819462 | Other | lineage4 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4818536 | Other | lineage4.9 | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR4819051 | Other | lineage4 | None | SRR4114384 | Sensitive | lineage4.3.4.2 | None | ERR2693257 | Other | None | ERR1035138 | MDR-TB | None | ERR4820484 | Other | lineage4.8 | None | ERR2179643 | MDR-TB | lineage4.5 | cn | SRR6045485 | Other | lineage4.9 | None | ERR2693254 | Other | None | ERR4820030 | Other | lineage4.9 | None | ERR2693231 | Other | None | ERR4821811 | RR-TB | lineage4.9 | None | ERR2693230 | Other | None | SRR6046117 | RR-TB | lineage4.9 | None | SRR6044784 | MDR-TB | lineage3 | None | ERR4821318 | HR-TB | lineage4.6.2.2 | gb | SRR6046141 | Other | lineage4.9 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6045664 | Other | lineage4.2.1 | None | SRR6046020 | Other | lineage3 | None | SRR6045010 | Other | lineage4 | None | SRR6044817 | Other | lineage3 | None | SRR6045944 | Other | lineage4.1.2.1 | None | SRR6045957 | Other | lineage4.9 | None | SRR6046385 | Other | lineage4.9 | None | SRR6045312 | Other | lineage1.1.3.3 | None | SRR6046219 | Other | lineage4.8;lineage3 | gb | SRR6046521 | Other | lineage4.4.1.1 | None | ERR4828955 | HR-TB | lineage4.8 | None | ERR2851356 | Sensitive | lineage4.9 | None | SRR6046852 | MDR-TB | lineage3 | None | SRR6046644 | HR-TB | None | SRR6046766 | Other | lineage3.1.1 | None | SRR6046815 | Other | lineage3 | None | SRR6046848 | Other | lineage4.6.5 | None | ERR323037 | HR-TB | lineage4 | None | ERR485006 | HR-TB | lineage4.9 | None | SRR6982246 | Sensitive | lineage4 | None | SRR6824354 | MDR-TB | lineage4.5 | cn | ERR323048 | Pre-XDR-TB | lineage4.9 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | ERR323045 | HR-TB | None | ERR017781 | Other | lineage3 | None | ERR323108 | HR-TB | lineage4 | None | ERR019855 | Other | lineage3 | None | ERR1063855 | Other | lineage4 | None | ERR1023525 | HR-TB | lineage4 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR037234 | Sensitive | lineage4.9 | None | ERR1034647 | MDR-TB | lineage4.1.1.3 | None | ERR1063859 | HR-TB | None | ERR1063857 | HR-TB | None | ERR1063862 | HR-TB | None | ERR1063858 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3283024 | Other | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283032 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3797019 | Other | La1.8.1 | None | ERR3445503 | HR-TB | None | ERR3797015 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797014 | Other | None | ERR3797017 | Other | None | ERR3797043 | HR-TB | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797044 | Other | None | ERR3797061 | Other | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR387051 | HR-TB | None | ERR4769436 | Other | La1.3 | None | ERR473332 | Other | lineage4 | None | ERR6359066 | HR-TB | lineage4 | None | ERR4769521 | HR-TB | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4811777 | MDR-TB | lineage4.3.4.2 | pe | ERR4798262 | HR-TB | La1 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR6358991 | HR-TB | None | ERR736835 | HR-TB | None | ERR736831 | HR-TB | lineage4.9 | None | ERR6866807 | HR-TB | lineage4 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736837 | Other | lineage4.9 | None | ERR9117788 | Other | lineage3 | None | ERR9117760 | HR-TB | lineage4.3 | None | ERR736875 | HR-TB | lineage4 | None | ERR9119669 | HR-TB | None | ERR9117827 | Other | lineage1.2.2.2 | None | SRR1173385 | Sensitive | lineage4.9 | None | ERR9787030 | Sensitive | lineage6 | None | ERR9786346 | Sensitive | lineage4.3.4.2 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | SRR1180252 | Other | lineage4.9 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR1181250 | Other | lineage4.9 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR13888750 | Other | La2 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR1792478 | HR-TB | La1.7.1 | None | ERR4812875 | MDR-TB | lineage4.3.4.2 | None | SRR21677886 | Sensitive | lineage4.9 | None | ERR176778 | HR-TB | None | ERR181744 | HR-TB | None | SRR3675234 | Other | None | SRR20969542 | Other | lineage4.4.2 | None | SRR22424765 | MDR-TB | lineage4 | None | ERR176779 | HR-TB | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR181824 | HR-TB | lineage4 | None | ERR176580 | Sensitive | lineage4.3.4.2.1 | None | ERR4813156 | Pre-XDR-TB | lineage4.3.4.2 | pe | ERR176651 | HR-TB | None | ERR176751 | HR-TB | None | ERR181887 | HR-TB | None | SRR3675456 | HR-TB | None | SRR3675555 | HR-TB | None | ERR4816151 | Other | lineage4.8 | None | ERR2027209 | MDR-TB | lineage1.2.1.1 | None | ERR2027257 | Other | lineage4.1.2.1 | None | ERR212125 | HR-TB | lineage4 | None | ERR212123 | Other | None | ERR212121 | HR-TB | None | SRR3732644 | MDR-TB | lineage4.6.2.2 | None |
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