EBG00000313339 - n.1875A>G


Drug resistance types
15 Sensitive 9 RR-TB 41 HR-TB 24 MDR-TB 5 Pre-XDR-TB 0 XDR-TB 26 Other
lineage Counts
lineage Count
lineage4.9 45
M.canetti;lineage4.9 1
lineage4.6.1.1 1
lineage4.3.4.2 7
lineage2.2.1 2
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage4.3.4.1 2
La1.7;M.canetti;lineage4.9 1
lineage4.2.2.2 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
lineage4.4.2 1
La2 1
lineage1;lineage4.9 1
M.canetti;lineage1 1
lineage4.5 3
lineage4.9;lineage7 3
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
lineage4.6.2.2 2
lineage1.1.1 1
La1.7.1;La1.7.X-unk4;lineage7 1
La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 1
lineage4.8 1
lineage4.1.1.3 1
M.canetti;lineage4.9;lineage9 1
lineage3 1
lineage2.2 1
lineage1.2.1.1 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La2;lineage2.2 1
La1.7.1 1
La1.6;La3;lineage4.9 2
La1.6;La3;lineage4.6.4;lineage4.9 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
La2;lineage4.9 1
lineage2.1;lineage4.9 2
lineage1.1.2 1
La3;lineage4.3.4 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage4.9;lineage6.3 1
La1.7;lineage4.9 3
La3;lineage4.9 1
lineage2.2.2 1
La1.7.1;lineage4.9 1
lineage4.1.2.1 2
lineage2.2.1;lineage4.1.2.1 1
lineage6.1.3 1
lineage6.1.2 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
La1.2.BCG 1
lineage4.3.4 1
lineage4.3.4.2.1 1
La1.7.X-unk4;lineage4.9 1
lineage4.1.1.1 1
La1.8.1 1
La1.7.1;La1.7.X-unk4 1
spoligotype Counts
spoligotype Count
None 120
Geographic prevalence
Country level data for this variant is available for 5 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR323037 Other lineage4.9 None
ERR176751 HR-TB lineage4.9 None
ERR736831 Other lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
SRR7535047 RR-TB lineage4.6.1.1 None
SRR10808730 Other lineage4.9 None
ERR9786346 Sensitive lineage4.3.4.2 None
SRR11972367 Sensitive lineage2.2.1 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR11465152 Sensitive lineage4.3.4.1 None
ERR3283018 HR-TB lineage4.9 None
ERR161037 HR-TB lineage4.9 None
SRR28393785 MDR-TB lineage4.3.4.2 None
SRR28393790 MDR-TB lineage4.3.4.2 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
ERR176651 Other lineage4.9 None
SRR11342687 RR-TB lineage4.2.2.2 None
ERR387051 RR-TB lineage4.9 None
ERR3283024 HR-TB La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
ERR4818536 Other lineage4.9 None
ERR3283030 HR-TB lineage4.9 None
ERR1063855 Other lineage4.9 None
SRR20969542 Other lineage4.4.2 None
SRR13888750 Other La2 None
ERR323045 HR-TB lineage1;lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
SRR1723916 MDR-TB lineage4.5 cn
ERR3445502 HR-TB lineage4.9;lineage7 None
ERR12117986 MDR-TB lineage4.3.4.2 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
SRR1184308 RR-TB lineage4.9 None
ERR3801503 Other lineage4.6.2.2 None
ERR4819462 Sensitive lineage4.9 None
ERR3283042 HR-TB lineage4.9 None
SRR14066533 RR-TB lineage1.1.1 None
ERR2851356 Sensitive lineage4.9 None
ERR3797047 MDR-TB lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR2693257 HR-TB La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 None
ERR473332 Other lineage4.9 None
ERR4820484 Sensitive lineage4.8 None
ERR9786711 Other lineage4.6.2.2 None
ERR1034647 MDR-TB lineage4.1.1.3 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
SRR28044873 Pre-XDR-TB lineage3 None
ERR4810624 MDR-TB lineage2.2 None
ERR2027209 MDR-TB lineage1.2.1.1 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR1792478 HR-TB La1.7.1 None
SRR6045832 Other lineage4.9 None
SRR6046141 Other lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
ERR3797061 Other La1.6;La3;lineage4.9 None
ERR2693231 HR-TB La1.6;La3;lineage4.6.4;lineage4.9 None
SRR6046644 MDR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR9119669 MDR-TB lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR3675495 RR-TB lineage2.1;lineage4.9 None
ERR736837 Pre-XDR-TB lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
ERR3797014 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR2693254 Other La1.6;La3;lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR6359066 HR-TB lineage4.9 None
SRR7898221 MDR-TB lineage1.1.2 None
ERR4821811 Sensitive lineage4.9 None
ERR161039 HR-TB La3;lineage4.3.4 None
SRR3675582 Other lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
ERR485006 HR-TB lineage4.9 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR181744 HR-TB La3;lineage4.9 None
SRR11342664 MDR-TB lineage2.2.2 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR4818646 Sensitive lineage4.1.2.1 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR11465232 Sensitive lineage4.1.2.1 None
SRR21677886 Sensitive lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR11488822 Pre-XDR-TB lineage2.2.1;lineage4.1.2.1 None
ERR4819383 RR-TB lineage4.9 None
ERR1023236 Other lineage6.1.3 None
ERR212125 HR-TB lineage4.9 None
ERR9787030 RR-TB lineage6.1.2 None
ERR2179643 MDR-TB lineage4.5 cn
ERR216938 HR-TB La1.7;lineage4.9 None
ERR3283021 MDR-TB lineage4.9 None
ERR181824 MDR-TB lineage4.9 None
ERR3797080 Sensitive lineage4.9 None
ERR4811777 MDR-TB lineage4.3.4.2 pe
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR4819051 Sensitive lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
ERR736817 HR-TB lineage4.3.4 None
SRR3675539 MDR-TB lineage4.9;lineage7 None
ERR11465235 Sensitive lineage4.3.4.2.1 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR1173385 Sensitive lineage4.9 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
ERR176741 Other lineage4.9 None
SRR11342642 MDR-TB lineage4.1.1.1 None
ERR181887 Other lineage4.9 None
SRR6824354 MDR-TB lineage4.5 cn
ERR3797019 Other La1.8.1 None
ERR4812875 MDR-TB lineage4.3.4.2 None
ERR176778 HR-TB lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR3283032 Other lineage4.9 None
ERR11465151 Sensitive lineage4.3.4.1 None
ERR1063862 HR-TB lineage4.9 None
ERR736875 HR-TB lineage4.9 None
ERR176779 HR-TB lineage4.9 None
ERR4813156 Pre-XDR-TB lineage4.3.4.2 pe