Rv0006 - c.825G>C

Note: the variant has been searched for in a non-representative convenience dataset of samples from the ENA. This sampleset may contain overrepresentation in certain categories such as geographic source, drug resistance type and lineage. Interpretation of variant frequencies should be performed cautiously with this in mind.
Drug resistance types
21 Sensitive 1 RR-TB 19 HR-TB 5 MDR-TB 1 Pre-XDR-TB 2 XDR-TB 18 Other
lineage Counts
lineage Count
lineage4.9 20
lineage4.8 8
La1.2 1
3
M.canetti;lineage2.2 2
lineage4.3.2;lineage4.9 1
lineage4.9;lineage6.3 1
M.canetti;lineage4.9;lineage9 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
La1.7;lineage4.9 7
La1.7 1
lineage4.4.1.2 1
M.canetti;lineage2.2.2;lineage6.2 2
lineage2.1;lineage4.1.4;lineage4.9 1
La1;lineage4.9 1
lineage4.1.2.1 2
lineage4.6.3;lineage4.9 1
La1.7;M.canetti;lineage4.9 2
lineage4.2;lineage4.9 1
M.canetti;lineage4.2;lineage4.9 1
La1.8.1 1
lineage4.3.2.1 1
lineage4.3.4.2.1 1
M.canetti;lineage1 1
La1.7.1 1
lineage2.2.1 1
M.canetti;lineage4.9 1
lineage4.3.4.1 1
spoligotype Counts
spoligotype Count
None 67
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1183111 HR-TB lineage4.9 None
SRR6856041 Sensitive lineage4.8 None
SRR23961549 Other La1.2 None
ERR4809242 MDR-TB lineage4.8 za
ERR987722 MDR-TB None
ERR212001 HR-TB None
ERR8975367 Sensitive lineage4.8 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
ERR2515830 Sensitive lineage4.8 za
ERR926165 Sensitive lineage4.9 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR3675501 Other La1.7;lineage4.9 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR3675492 Other La1.7;lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR702405 Sensitive lineage4.9 None
ERR926162 Sensitive lineage4.9 None
SRR6856048 Sensitive lineage4.8 None
ERR4830353 Other La1.7 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR4769474 HR-TB lineage4.9 None
ERR216938 HR-TB La1.7;lineage4.9 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
SRR29231479 RR-TB lineage4.9 None
ERR926163 Other lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
ERR4809046 Sensitive lineage4.8 za
ERR4407552 Sensitive lineage4.1.2.1 None
SRR6046485 Other lineage4.9 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
ERR234659 Other None
ERR926156 Sensitive lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
ERR4821180 Sensitive lineage4.8 gb
ERR4831545 XDR-TB M.canetti;lineage2.2 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
ERR926155 Sensitive lineage4.9 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
ERR926157 Sensitive lineage4.9 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
SRR3675385 Other La1.7;lineage4.9 None
ERR2516048 Sensitive lineage4.8 za
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR1791747 Other La1.8.1 None
SRR12708407 HR-TB lineage4.3.2.1 None
SRR3675267 Other La1.7;lineage4.9 None
ERR9786749 Sensitive lineage4.1.2.1 None
ERR161034 Other lineage4.3.4.2.1 None
ERR926160 Sensitive lineage4.9 None
ERR926158 Sensitive lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
SRR6511621 Sensitive lineage4.9 None
SRR1792478 HR-TB La1.7.1 None
ERR4816466 HR-TB lineage4.9 None
ERR971389 Sensitive lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
SRR8217918 HR-TB lineage4.9 None
SRR5341465 Pre-XDR-TB lineage2.2.1 None
ERR926164 Other lineage4.9 None
SRR3675449 Other M.canetti;lineage4.9 None
SRR3675488 Other La1.7;lineage4.9 None
ERR11465360 MDR-TB lineage4.3.4.1 None