Rv0006 - c.825G>C
Drug resistance types
20 Sensitive
1 RR-TB
20 HR-TB
5 MDR-TB
0 Pre-XDR-TB
2 XDR-TB
17 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 7 |
| M.canetti;lineage2.2 | 2 |
| lineage4.2;lineage4.9 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| lineage4.3.4.2.1 | 1 |
| lineage4.9 | 20 |
| La1.7 | 1 |
| M.canetti;lineage2.2.2;lineage6.2 | 2 |
| lineage4.4.1.2 | 1 |
| 3 | |
| lineage4.9;lineage6.3 | 1 |
| La1.7;M.canetti;lineage4.9 | 2 |
| La1.8.1 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.1.2.1 | 2 |
| M.canetti;lineage1 | 1 |
| lineage2.1;lineage4.1.4;lineage4.9 | 1 |
| La1;lineage4.9 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage4.3.2;lineage4.9 | 1 |
| M.canetti;lineage4.2;lineage4.9 | 1 |
| La1.7;lineage4.9 | 7 |
| La1.7.1 | 1 |
| lineage4.3.4.1 | 1 |
| La1.2 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 65 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR2515830 | Sensitive | lineage4.8 | za | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR161034 | HR-TB | lineage4.3.4.2.1 | None | ERR702405 | Sensitive | lineage4.9 | None | ERR4830353 | Other | La1.7 | None | ERR1873492 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR6511621 | Sensitive | lineage4.9 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR212001 | HR-TB | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | ERR926155 | Sensitive | lineage4.9 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SRR1791747 | Other | La1.8.1 | None | SRR6856048 | Sensitive | lineage4.8 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | ERR9786749 | Sensitive | lineage4.1.2.1 | None | ERR8975367 | Sensitive | lineage4.8 | None | ERR4769474 | HR-TB | lineage4.9 | None | SRR15014655 | Other | M.canetti;lineage1 | None | ERR3797036 | HR-TB | lineage2.1;lineage4.1.4;lineage4.9 | None | ERR971389 | Sensitive | lineage4.9 | None | SRR8217918 | HR-TB | lineage4.9 | None | ERR133825 | HR-TB | La1;lineage4.9 | None | SRR3675449 | Other | M.canetti;lineage4.9 | None | SRR1183111 | HR-TB | lineage4.9 | None | SRR6856041 | Sensitive | lineage4.8 | None | SRR6046485 | Other | lineage4.9 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | ERR926156 | Sensitive | lineage4.9 | None | SRR29231479 | RR-TB | lineage4.9 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | ERR926157 | Sensitive | lineage4.9 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | ERR2516048 | Sensitive | lineage4.8 | za | ERR4831546 | HR-TB | M.canetti;lineage2.2.2;lineage6.2 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR3675492 | Other | La1.7;lineage4.9 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | ERR4809242 | MDR-TB | lineage4.8 | za | ERR926160 | Sensitive | lineage4.9 | None | ERR926158 | Sensitive | lineage4.9 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | ERR926163 | Other | lineage4.9 | None | ERR4809046 | Sensitive | lineage4.8 | za | ERR4816466 | HR-TB | lineage4.9 | None | ERR1035122 | Sensitive | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | ERR11465360 | MDR-TB | lineage4.3.4.1 | None | ERR4407552 | Sensitive | lineage4.1.2.1 | None | SRR23961549 | Other | La1.2 | None | ERR11252558 | Other | lineage4.6.3;lineage4.9 | None | ERR987722 | MDR-TB | None | ERR234659 | Other | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | SRR1180226 | HR-TB | lineage4.9 | None | ERR926165 | Sensitive | lineage4.9 | None |
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