Rv0676c - c.2625T>C


Drug resistance types
51 Sensitive 6 RR-TB 77 HR-TB 28 MDR-TB 2 Pre-XDR-TB 0 XDR-TB 55 Other
lineage Counts
lineage Count
lineage4.9 83
La2;lineage4.9 1
lineage6.1.3 1
La3;lineage4.9 9
lineage2.2.1 13
lineage4.6.2.2 2
La1;lineage4.9 3
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 3
lineage4.3.4.2.1 1
lineage1.1.3.1 1
M.canetti;lineage2.1;lineage4.9;lineage6.3 5
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
La1.7;lineage3;lineage4.9;lineage7 1
La1.2 1
lineage4.8;lineage4.9 2
lineage2.1;lineage4.1.1.1;lineage6.3 2
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 3
La1.6;lineage4 1
La1.8.1 3
M.canetti;lineage2.1;lineage4.9 11
La3;M.canetti;lineage2.1;lineage4.9 7
lineage4.3.3 3
lineage2.1;lineage4.9 3
M.canetti;lineage2.2.2;lineage6.2 2
La1.7;lineage4.9;lineage7 1
La2;lineage2.2 1
lineage4.1.2 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 4
La1.7;lineage4.9 5
La1;lineage2;lineage4.9 1
lineage4.3.4.2 1
lineage4 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
La1.7.1;La1.7.X-unk4;lineage7 1
La1;lineage4.1.2 1
lineage4.9;lineage7 1
La1.7;M.canetti;lineage4.9 1
lineage2.2.1.1 1
M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9 1
lineage2.2.1.2;lineage7 1
lineage2.2 4
M.canetti;lineage4.9;lineage9 1
La3;lineage4 1
2
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage4.6.3;lineage4.9 1
M.canetti;lineage4.9 1
lineage1.2.1.1 1
lineage4.3.2.1 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
lineage4.9;lineage6.3 1
lineage2.1;lineage4.9;lineage6.3;lineage8 1
M.canetti;lineage2.1;lineage6.3 1
La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 2
lineage1.1.2 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
lineage2.1;lineage2.2;lineage6.3 1
M.canetti;lineage2.1;lineage4.3.1;lineage4.9 1
La1.2.BCG 1
M.canetti;lineage4.1.1.3;lineage6.3;lineage8 1
La1.7;lineage4.9;lineage6 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
La1.6;La3;lineage4.6.4;lineage4.9 1
spoligotype Counts
spoligotype Count
None 219
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR323115 Sensitive lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR9787256 Other lineage6.1.3 None
ERR3283031 Sensitive La3;lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
ERR3283014 Sensitive La3;lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
SRR3675235 Sensitive lineage4.9 None
SRR6045219 HR-TB lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR9119525 MDR-TB lineage4.6.2.2 None
SRR10315567 HR-TB lineage2.2.1 None
SRR10808805 Other La1;lineage4.9 None
SRR6280222 Other lineage2.2.1 cn
SRR23961542 Other La1;lineage4.9 None
ERR926159 Sensitive lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR108471 HR-TB lineage4.9 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR971389 Sensitive lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR6866639 Other lineage4.9 None
ERR926164 Other lineage4.9 None
SRR6046594 Sensitive lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR5311096 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR5341467 Other lineage4.9 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR736834 Sensitive lineage4.9 None
ERR5311094 HR-TB lineage4.9 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
SRR23961549 Other La1.2 None
SRR9971112 Other lineage2.2.1 None
SRR5341299 HR-TB lineage4.9 None
ERR4024991 Other lineage4.8;lineage4.9 None
SRR5341456 Other lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
ERR4797264 Sensitive lineage4.9 None
ERR11252612 Other La3;lineage4.9 None
SRR3675554 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR5341387 Other lineage4.9 None
SRR6325442 HR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
ERR126600 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR3797087 Sensitive lineage4.9 None
ERR4797474 Sensitive lineage4.9 None
SRR28351554 Sensitive La1.6;lineage4 None
SRR7236177 Other La1.8.1 None
ERR176658 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323063 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR9971041 MDR-TB lineage4.3.3 None
ERR323058 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR3797067 Other La1.8.1 None
ERR294248 MDR-TB lineage2.1;lineage4.9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR3675506 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR1159378 Other lineage4.9 None
ERR8665994 Other lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
ERR6358979 Other lineage4.9 None
ERR6866410 Sensitive lineage4.9 None
SRR20969731 Other lineage2.2.1 None
SRR6325445 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR736848 Other lineage4.9 None
SRR6046492 Other lineage4.9 None
SRR3675486 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR736856 Sensitive lineage4.9 None
SRR10809074 Sensitive lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
ERR3283030 HR-TB lineage4.9 None
ERR323064 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR124636 Sensitive lineage4.9 None
ERR216938 HR-TB La1.7;lineage4.9 None
ERR067699 Sensitive La1;lineage2;lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
ERR9634265 Sensitive lineage4.3.4.2 None
ERR3273109 HR-TB lineage4 None
SRR3675561 Other M.canetti;lineage2.1;lineage4.9 None
ERR751326 Other lineage4.9 None
ERR278594 HR-TB lineage2.1;lineage4.9 None
ERR3283032 Other lineage4.9 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675518 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR133825 HR-TB La1;lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
ERR3797047 MDR-TB lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
SRR5341308 Sensitive lineage4.9 None
ERR473332 Other lineage4.9 None
SRR9970978 Sensitive La1;lineage4.1.2 None
ERR4831117 HR-TB lineage4.9;lineage7 None
ERR3797065 RR-TB lineage4.9 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
SRR29096174 Sensitive La1.7;lineage4.9 None
ERR1873393 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR386953 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4831621 MDR-TB lineage2.2.1.1 None
SRR1183965 Sensitive lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR6325448 HR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR323047 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR3675545 Other La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR3675568 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3;lineage8 None
ERR2693252 Sensitive lineage4.9 None
SRR6045795 Sensitive lineage2.2.1 None
SRR3675322 HR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9 None
SRR18549032 HR-TB lineage2.2.1.2;lineage7 None
ERR4188342 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
SRR10808668 Sensitive lineage2.2.1 None
ERR3797029 Other lineage4.9 None
ERR736872 HR-TB lineage4.9 None
SRR3675507 Other lineage4.9 None
ERR4810624 MDR-TB lineage2.2 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR3283028 Other La3;lineage4 None
SRR6046514 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR1063896 Sensitive None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR1791747 Other La1.8.1 None
SRR20969708 HR-TB lineage2.2 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR702405 Sensitive lineage4.9 None
ERR323107 Sensitive lineage4.9 None
SRR14801759 HR-TB La1.7;lineage4.9 None
ERR4814734 Other lineage1.2.1.1 None
ERR502510 Sensitive lineage4.9 None
ERR3468544 Other lineage2.1;lineage4.9 None
ERR4821655 HR-TB lineage4.9 None
ERR5311078 MDR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
SRR14801749 HR-TB lineage4.9 None
ERR3797063 Sensitive La3;lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
ERR4797184 Sensitive lineage4.9 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR926161 Sensitive lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR6325447 MDR-TB lineage2.1;lineage4.1.1.1;lineage6.3 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
SRR6511621 Sensitive lineage4.9 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
SRR6280242 Other lineage2.2.1 cn
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR3283021 HR-TB lineage4.9 None
SRR3675464 HR-TB lineage2.1;lineage4.9;lineage6.3;lineage8 None
SRR6045948 MDR-TB M.canetti;lineage2.1;lineage4.9 None
SRR6280165 Other lineage2.2.1 cn
SRR6325444 MDR-TB M.canetti;lineage2.1;lineage6.3 None
SRR5341453 Other lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
SRR3675246 Other lineage4.9 None
SRR3675450 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR4797193 HR-TB lineage1.1.2 None
SRR29096873 Sensitive lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
SRR6044835 Other lineage4.9 None
ERR779852 Sensitive lineage4.9 None
SRR3675585 Sensitive lineage4.9 None
SRR3675234 Other La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR8976043 HR-TB lineage2.1;lineage2.2;lineage6.3 None
SRR6045892 Sensitive lineage4.9 None
ERR5908228 RR-TB lineage4.3.3 None
SRR6280328 Other lineage2.2.1 cn
ERR3283057 Sensitive La3;lineage4.9 None
SRR3675320 MDR-TB M.canetti;lineage2.1;lineage4.3.1;lineage4.9 None
ERR323033 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
SRR11662690 HR-TB lineage4.9 None
SRR5341469 HR-TB lineage4.9 None
ERR9119096 RR-TB lineage4.3.3 None
SRR20970016 Other lineage2.2 None
ERR9786843 Other None
ERR124652 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
SRR19295647 Sensitive lineage4.9 None
ERR6866022 Other lineage4.8;lineage4.9 None
SRR6045555 Other lineage4.9 None
ERR926165 Sensitive lineage4.9 None
SRR3675558 HR-TB M.canetti;lineage4.1.1.3;lineage6.3;lineage8 None
ERR4796254 Sensitive lineage4.9 None
ERR5311098 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR6358837 HR-TB La3;M.canetti;lineage2.1;lineage4.3.1;lineage4.9;lineage6.3 None
ERR6866807 Other lineage4.9 None
ERR3797016 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR323062 Sensitive lineage4.9 None
SRR6045952 HR-TB M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR137286 Other lineage4.9 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR323066 Sensitive lineage4.9 None
ERR1035239 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR3283024 Other La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
ERR502511 Sensitive lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
ERR5311101 MDR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797048 Other La3;lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
SRR10315466 RR-TB lineage2.2.1 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR13285068 Sensitive lineage4.9 None
ERR126608 HR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR2693231 Other La1.6;La3;lineage4.6.4;lineage4.9 None
ERR926162 Sensitive lineage4.9 None
ERR4831617 MDR-TB lineage2.2.1 None
SRR5341300 HR-TB lineage4.9 None