Rv3244c - c.-888G>C


Drug resistance types
7 Sensitive 5 RR-TB 26 HR-TB 14 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 25 Other
lineage Counts
lineage Count
lineage4.6.2.2 2
lineage4.9 22
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
lineage4.9;lineage7 4
lineage4.6.3;lineage4.9 1
La1.7;lineage4.9 4
lineage4.6.4;lineage4.9 1
lineage1.2.1.2 1
lineage2.1;lineage4.9;lineage7 1
lineage4.3.4.2.1 1
M.canetti;lineage2.2.2;lineage6.2 2
La2;lineage4.9 1
lineage1;lineage4.9 1
lineage4.1;lineage4.8 2
lineage3 1
La1.7.1;lineage4.9 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
La1.7.1;La1.7.X-unk4;lineage7 1
lineage6.1.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
lineage2.2.1 3
2
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
M.canetti;lineage4.6.4;lineage4.9 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
La2;lineage2.2 1
La1.6;La3;M.canetti;lineage4.2.2 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
M.canetti;lineage4.2;lineage4.9 1
lineage2.1;lineage4.9 1
La1.7.1;La1.7.X-unk4 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La1;lineage4.9 1
lineage4.9;lineage6.3 1
La1.2 1
lineage2.2.1.1 1
M.canetti;lineage4.2 1
La1.2.BCG 1
lineage4.3.4 1
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
spoligotype Counts
spoligotype Count
None 78
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR4596910 Sensitive lineage4.9 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR3675456 RR-TB lineage4.9;lineage7 None
ERR3283018 HR-TB lineage4.9 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR20632814 Sensitive lineage4.9 None
ERR4188322 Other lineage4.6.4;lineage4.9 None
SRR12006550 Sensitive lineage1.2.1.2 None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR161034 HR-TB lineage4.3.4.2.1 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR9119669 HR-TB lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
SRR14801759 HR-TB La1.7;lineage4.9 None
SRR3675446 RR-TB lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR181887 Other lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR9786526 Other lineage4.1;lineage4.8 None
ERR4816470 HR-TB lineage3 None
ERR3797043 Sensitive lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR1063849 HR-TB lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR9787153 Other lineage6.1.3 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
ERR7821163 Other lineage2.2.1 None
SRR3675390 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR212001 HR-TB None
ERR181824 HR-TB lineage4.9 None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR176778 HR-TB lineage4.9 None
ERR3445502 Sensitive lineage4.9;lineage7 None
ERR736875 HR-TB lineage4.9 None
ERR9786525 Other lineage4.1;lineage4.8 None
SRR6046382 Sensitive lineage2.2.1 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR6866807 Other lineage4.9 None
SRR3675586 Other M.canetti;lineage4.6.4;lineage4.9 None
ERR3283042 Other lineage4.9 None
ERR176651 Other lineage4.9 None
ERR387051 Other lineage4.9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
SRR3675495 Other lineage2.1;lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR216938 HR-TB La1.7;lineage4.9 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR176779 HR-TB lineage4.9 None
SRR23961542 Other La1;lineage4.9 None
ERR323037 Other lineage4.9 None
ERR212125 HR-TB lineage4.9 None
SRR6046225 Other lineage4.9;lineage6.3 None
SRR23961549 Other La1.2 None
SRR6079962 HR-TB lineage2.2.1.1 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR4798262 HR-TB La1.2.BCG None
ERR9786843 Other None
SRR3675539 HR-TB lineage4.9;lineage7 None
ERR1063858 HR-TB lineage4.9 None
ERR736817 HR-TB lineage4.3.4 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
SRR29096879 Sensitive lineage4.9 None