Rv0668 - c.3345G>C


Drug resistance types
35 Sensitive 6 RR-TB 27 HR-TB 16 MDR-TB 2 Pre-XDR-TB 0 XDR-TB 34 Other
lineage Counts
lineage Count
La1.7.1 1
lineage4.1.2 1
M.canetti;lineage4.2;lineage4.9 1
lineage2.2.1 6
La1.7;lineage4.9 6
lineage4.9 55
La2;lineage4.9 1
lineage2.1;lineage4.9 1
lineage1.2.1.1 1
lineage4.1.1.2 1
La3;lineage4.3.4 1
La1;lineage2;lineage4.9 1
M.canetti;lineage1 1
lineage4.9;lineage9 1
La1;lineage4.9 2
lineage1.1.3.1 1
lineage2.2.1.1 1
M.canetti;lineage4.6.4;lineage4.9 2
lineage2.2 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 3
M.canetti;lineage4.9;lineage9 1
La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 1
La1.2;La1.8.1 1
M.canetti;lineage2.2.2;lineage6.2 2
lineage4.3.2.1 1
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
lineage4 2
lineage4.2.1 1
lineage1.1.2 1
M.canetti;lineage4.2 1
lineage4.8 1
lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
La1.7;lineage4.9;lineage6 1
La2;lineage2.2 1
La1.6;La3;M.canetti;lineage4.2.2 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
lineage4.1.1.3 1
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
La1;lineage4.1.2 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
lineage4.8;lineage4.9 2
lineage3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La1.6;lineage4 1
La3;lineage4.9 1
1
La1.7.X-unk4;lineage4.9 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
spoligotype Counts
spoligotype Count
None 120
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1792478 HR-TB La1.7.1 None
SRR9970980 HR-TB lineage4.1.2 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
ERR4831617 MDR-TB lineage2.2.1 None
SRR14801759 HR-TB La1.7;lineage4.9 None
ERR4798099 Other lineage4.9 None
SRR3675446 RR-TB lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR4814734 Other lineage1.2.1.1 None
ERR1063883 HR-TB lineage4.9 None
ERR4818252 Sensitive lineage4.1.1.2 None
ERR124636 Sensitive lineage4.9 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR216938 HR-TB La1.7;lineage4.9 None
ERR067699 Sensitive La1;lineage2;lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR1035122 Sensitive lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR6866639 Other lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
ERR1023509 Other lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
SRR5341308 Sensitive lineage4.9 None
ERR1034634 HR-TB lineage4.9 None
SRR29050859 Other lineage4.9 None
ERR779852 Sensitive lineage4.9 None
SRR1180147 Other lineage2.2.1.1 None
SRR5341469 HR-TB lineage4.9 None
ERR4797264 Sensitive lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
SRR19295647 Sensitive lineage4.9 None
ERR2693252 Sensitive lineage4.9 None
ERR6866807 Other lineage4.9 None
SRR3675586 Other M.canetti;lineage4.6.4;lineage4.9 None
SRR1158918 Sensitive lineage4.9 None
ERR137286 Other lineage4.9 None
SRR10808668 Sensitive lineage2.2.1 None
ERR4810624 MDR-TB lineage2.2 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR502511 Sensitive lineage4.9 None
SRR1159378 Other lineage4.9 None
ERR6358979 Other lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR5311103 RR-TB La1.6;La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.2;lineage4.9 None
ERR323107 Sensitive lineage4.9 None
SRR5341300 HR-TB lineage4.9 None
ERR323115 Sensitive lineage4.9 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR502510 Sensitive lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
SRR3675235 Sensitive lineage4.9 None
SRR5341330 Other lineage4.9 None
SRR16156817 Other lineage4.9 None
SRR7240033 Other La1.2;La1.8.1 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR3273109 HR-TB lineage4 None
ERR751326 Other lineage4.9 None
SRR14802079 MDR-TB lineage4.2.1 None
SRR8217918 HR-TB lineage4.9 None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
ERR4797193 HR-TB lineage1.1.2 None
SRR3675585 Sensitive lineage4.9 None
SRR6045892 Sensitive lineage4.9 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
ERR4796929 Sensitive lineage4.9 None
ERR4816151 Sensitive lineage4.8 None
SRR28351488 MDR-TB lineage2.2.1 None
SRR5341387 Other lineage4.9 None
SRR29231479 RR-TB lineage4.9 None
ERR4188322 Other lineage4.6.4;lineage4.9 None
ERR4797474 Sensitive lineage4.9 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR3439432 Other M.canetti;lineage4.6.4;lineage4.9 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR736872 HR-TB lineage4.9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
ERR6866410 Sensitive lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR702405 Sensitive lineage4.9 None
ERR736856 Sensitive lineage4.9 None
SRR10809074 Sensitive lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
ERR4797184 Sensitive lineage4.9 None
ERR161037 Other lineage4.9 None
SRR10315567 HR-TB lineage2.2.1 None
SRR10808805 Other La1;lineage4.9 None
SRR6511621 Sensitive lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
ERR11466044 Other lineage4.1.1.3 None
SRR5341453 Other lineage4.9 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
SRR9970978 Sensitive La1;lineage4.1.2 None
SRR5341467 Other lineage4.9 None
ERR736834 Sensitive lineage4.9 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR5341299 HR-TB lineage4.9 None
ERR4024991 Other lineage4.8;lineage4.9 None
ERR176560 HR-TB La1.7;lineage4.9 None
SRR3675390 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR5341412 Pre-XDR-TB lineage3 None
SRR28351339 MDR-TB lineage4 None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR212034 HR-TB La1.7;lineage4.9 None
ERR6866022 Other lineage4.8;lineage4.9 None
SRR28351554 Sensitive La1.6;lineage4 None
ERR4796254 Sensitive lineage4.9 None
ERR323062 Sensitive lineage4.9 None
ERR181744 HR-TB La3;lineage4.9 None
ERR323066 Sensitive lineage4.9 None
ERR1063896 Sensitive None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR9119669 HR-TB lineage4.9 None