Rv3596c - c.1938G>T


Drug resistance types
95 Sensitive 3 RR-TB 32 HR-TB 9 MDR-TB 3 Pre-XDR-TB 0 XDR-TB 36 Other
lineage Counts
lineage Count
lineage4.9 107
lineage1;lineage4.9 1
lineage4.8 2
lineage4.1.1.2 1
lineage2.2.1 14
lineage4.3.2.1 3
La1;lineage4.9 2
lineage3 3
lineage4 3
lineage4.2.1 1
lineage4.3.4.2.1 1
La1.7;lineage4.9;lineage7 3
lineage2.2.1;lineage4.9 3
lineage1.1.1;lineage4 1
lineage4.4.1.1.1 2
lineage2;lineage4.9 1
lineage2.2.1;lineage4 2
lineage4.1.2 1
La3;M.canetti;lineage4.9 1
lineage2.2;lineage4.9 1
La1.7;lineage3.1;lineage4 1
La1.7;lineage4.9 3
lineage4.1.2.1 4
La1.7.1;La1.7.X-unk4;lineage7 1
La1;lineage4.1.2 1
La1.7;lineage3;lineage4.9;lineage7 1
lineage4.8;lineage4.9 2
lineage4.6.2.2 1
lineage4.1.1.1 1
lineage4.1;lineage4.9 1
La1.8.1 2
lineage2.2.1;lineage4.1.2.1 1
lineage4.9;lineage7 1
lineage4.3.3 2
1
lineage4.1.1.3 1
lineage1.1.2 1
spoligotype Counts
spoligotype Count
None 178
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1175487 Sensitive lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR2229198 Sensitive lineage4.8 None
ERR502510 Sensitive lineage4.9 None
SRR16156817 Other lineage4.9 None
SRR10315751 MDR-TB lineage4.8 None
SRR11662694 Other lineage4.9 None
ERR4819051 Sensitive lineage4.9 None
ERR363474 Sensitive lineage4.9 None
ERR4818252 Sensitive lineage4.1.1.2 None
SRR10315567 HR-TB lineage2.2.1 None
SRR5341461 HR-TB lineage4.9 None
ERR349299 Other lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR12708392 Other lineage2.2.1 None
SRR10808805 Other La1;lineage4.9 None
ERR2514552 Sensitive lineage3 None
SRR6511621 Sensitive lineage4.9 None
ERR400336 Sensitive lineage4.9 None
ERR3273109 HR-TB lineage4 None
SRR1180319 Sensitive lineage4.9 None
ERR363509 Sensitive lineage4.9 None
ERR363499 Sensitive lineage4.9 None
SRR14802079 MDR-TB lineage4.2.1 None
ERR373947 Other lineage4.9 None
SRR5341467 Other lineage4.9 None
ERR11465511 Other lineage4.3.4.2.1 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR9971112 Other lineage2.2.1 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
ERR4818110 Sensitive lineage4.9 None
SRR1181402 Sensitive lineage4.9 None
ERR4769442 Sensitive lineage4.9 None
ERR4769497 Other La1;lineage4.9 None
ERR2513229 MDR-TB lineage2.2.1 None
SRR9971270 RR-TB lineage2.2.1 None
SRR1180312 Sensitive lineage4.9 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
ERR4796254 Sensitive lineage4.9 None
ERR4815310 Other lineage2.2.1;lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
ERR369162 Other lineage4.9 None
SRR3675580 Sensitive lineage4.9 None
SRR1180444 Sensitive lineage4.9 None
SRR3675265 Other lineage4 None
SRR1180946 Sensitive lineage2;lineage4.9 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
SRR9970980 HR-TB lineage4.1.2 None
SRR5341455 Sensitive lineage4.9 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
ERR2513259 Other lineage3 None
ERR4831617 MDR-TB lineage2.2.1 None
SRR12708418 HR-TB lineage2.2.1 None
ERR4815550 Other lineage2.2;lineage4.9 None
SRR3675235 Sensitive lineage4.9 None
ERR373945 Sensitive lineage4.9 None
ERR4769433 RR-TB lineage4.9 None
ERR363426 Sensitive lineage4.9 None
ERR400345 Other lineage4.9 None
ERR4821655 HR-TB lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
SRR1181283 Sensitive lineage4.9 None
SRR22424787 Sensitive lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
ERR124636 Sensitive lineage4.9 None
ERR216938 HR-TB La1.7;lineage4.9 None
ERR6865513 Other lineage4.1.2.1 None
SRR6044876 Sensitive lineage4.9 None
ERR751326 Other lineage4.9 None
ERR4816904 Sensitive lineage4.1.2.1 None
SRR5341453 Other lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
SRR9970978 Sensitive La1;lineage4.1.2 None
SRR1175512 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR6045706 Sensitive lineage4.9 None
SRR11972367 Sensitive lineage2.2.1 None
ERR349266 Sensitive lineage4.9 None
ERR373946 Sensitive lineage4.9 None
SRR3675585 Sensitive lineage4.9 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
SRR1181351 Sensitive lineage4.9 None
ERR4797264 Sensitive lineage4.9 None
ERR4024991 Other lineage4.8;lineage4.9 None
SRR20632814 Sensitive lineage4.9 None
ERR349264 Sensitive lineage4.9 None
ERR363446 Sensitive lineage4.9 None
ERR4797474 Sensitive lineage4.9 None
ERR6866022 Other lineage4.8;lineage4.9 None
SRR12708396 MDR-TB lineage4.3.2.1 None
SRR6045503 Sensitive lineage4.9 None
SRR1175513 Sensitive lineage4.9 None
ERR4819809 HR-TB lineage4.6.2.2 None
SRR1180410 Sensitive lineage4.9 None
SRR7535082 Sensitive lineage4.9 None
ERR323062 Sensitive lineage4.9 None
SRR1158918 Sensitive lineage4.9 None
SRR1181325 Sensitive lineage4.9 None
ERR137286 Other lineage4.9 None
ERR4816113 Sensitive lineage4.1.1.1 None
SRR6046611 Sensitive lineage4.9 None
ERR736872 HR-TB lineage4.9 None
ERR4798431 Sensitive lineage4.1;lineage4.9 None
SRR12708414 HR-TB lineage2.2.1 None
SRR6044875 Sensitive lineage4.9 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
SRR1180375 Sensitive lineage4.9 None
SRR1180300 Sensitive lineage4.9 None
ERR502511 Sensitive lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
ERR4831620 MDR-TB lineage2.2.1 None
SRR1172717 Sensitive lineage4.9 None
SRR6046210 Other lineage4.9 None
SRR5341432 Sensitive La1.7;lineage4.9;lineage7 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR4178309 Other lineage4.1.2.1 None
ERR736837 Pre-XDR-TB lineage4.9 None
ERR4799547 HR-TB lineage2.2.1 None
SRR5341300 HR-TB lineage4.9 None
ERR4798099 Other lineage4.9 None
ERR4831616 MDR-TB lineage2.2.1 None
SRR5341384 HR-TB lineage4.9 None
ERR349265 Other lineage4.9 None
SRR1180420 Sensitive lineage4.9 None
SRR6046897 Sensitive lineage4.9 None
SRR14801749 HR-TB lineage4.9 None
ERR4816470 HR-TB lineage3 None
ERR4797184 Sensitive lineage4.9 None
ERR6866125 Sensitive lineage4.1.2.1 None
SRR6045371 Other lineage4.9 None
SRR1183054 Sensitive lineage4.9 None
ERR108471 HR-TB lineage4.9 None
SRR1181349 Sensitive lineage4 None
ERR1035122 Sensitive lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR6866639 Other lineage4.9 None
SRR7236330 Other La1.8.1 None
SRR21677886 Sensitive lineage4.9 None
SRR5341308 Sensitive lineage4.9 None
ERR1034634 HR-TB lineage4.9 None
ERR11488822 Pre-XDR-TB lineage2.2.1;lineage4.1.2.1 None
SRR1180413 Sensitive lineage4.9 None
ERR736834 Sensitive lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
SRR2010299 MDR-TB lineage2.2.1 None
ERR349296 Sensitive lineage4.9 None
SRR5341469 HR-TB lineage4.9 None
ERR363456 Sensitive lineage4.9 None
ERR405209 Sensitive La1.7;lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR19295647 Sensitive lineage4.9 None
ERR3445502 Sensitive lineage4.9;lineage7 None
SRR7236177 Other La1.8.1 None
SRR6045010 Sensitive lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
SRR1180250 Other lineage4.9 None
ERR323066 Sensitive lineage4.9 None
SRR9971114 Other lineage2.2.1 None
ERR4769439 HR-TB lineage4.9 None
SRR9971041 MDR-TB lineage4.3.3 None
SRR1180345 Other lineage4.9 None
ERR1063896 Sensitive None
ERR369158 Other lineage4.9 None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
ERR9119669 HR-TB lineage4.9 None
SRR12708413 HR-TB lineage4.1.1.3 None
SRR5153091 HR-TB lineage4.3.3 None
SRR3675292 Sensitive lineage4.9 None
SRR5341310 Other lineage1.1.2 None
ERR702405 Sensitive lineage4.9 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
SRR1184114 Sensitive lineage2.2.1;lineage4.9 None
ERR323107 Sensitive lineage4.9 None
ERR349300 Sensitive lineage4.9 None
ERR363421 Sensitive lineage4.9 None
ERR369161 Sensitive lineage4.9 None
SRR12708407 HR-TB lineage4.3.2.1 None