Rv1908c - c.384G>C


Drug resistance types
43 Sensitive 3 RR-TB 129 HR-TB 25 MDR-TB 22 Pre-XDR-TB 3 XDR-TB 105 Other
lineage Counts
lineage Count
lineage1.1.2 4
18
lineage4.3.4.1 1
lineage2.2.1 35
lineage4.9;lineage6.3 8
M.canetti;lineage2.2 2
lineage4.9 95
lineage2.2.2 18
lineage2.2.2;lineage4 5
lineage4.8;lineage4.9 2
lineage2.1;lineage4.9 15
lineage3 7
lineage4.1.2 2
lineage4 4
La1.2.BCG;La1.8.1 1
La3;lineage2.1;lineage4.9;lineage6.3 4
La1.7;lineage4.9;lineage6 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
La3;lineage2.1;lineage6.3 1
lineage4.3.4.2.1 2
La3;lineage2 1
La3;lineage2.1;lineage4.9 2
La3;lineage4.9 2
lineage2.1;lineage6.3 2
La3;lineage1.1.2 1
La1.7.1 1
La1.7;lineage4.9 3
M.canetti;lineage4.9 2
lineage4.9;lineage7 3
lineage4.9;lineage9 1
lineage2.2.1;lineage2.2.2 4
lineage4.6.2.2 2
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage2.1;lineage4.3.2;lineage4.9 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
La3 2
lineage2.1 5
lineage2.2.2;lineage4.9 1
La1.7.1;La1.7.X-unk4;lineage7 1
lineage4.4.1.2 1
lineage2.2;lineage4.9 1
lineage4.3.3 1
lineage4.4.1.1 1
lineage2.1;lineage4.9;lineage6.3 8
La1.2.BCG 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
La1.7;M.canetti;lineage4.9 1
lineage2.1;lineage4.9;lineage7 1
lineage3.1.2.1;lineage3.1.2.2 1
lineage4.6.1.1 1
La3;lineage4.8 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage2.2.1 1
lineage4.7 1
lineage2.2.1;lineage3 1
lineage4.5 2
lineage2.2.1.1 3
lineage2.1;lineage4.1.4;lineage4.9 1
La1;lineage4.1.2 1
M.canetti;lineage2.1;lineage6.3 1
lineage4.2;lineage4.8.1;lineage4.9 1
La1.7;lineage4.9;lineage7 1
La1.7;lineage4.2 1
lineage4.4.2 2
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.3.4 1
M.canetti;lineage4.9;lineage9 1
lineage2;lineage4.9 2
lineage4.2;lineage4.6.3;lineage4.9.1 1
La3;lineage2.2.1 1
La1.7.X-unk4;lineage4.9 1
lineage2.2 1
M.canetti;lineage2.1;lineage4.9 2
La2;lineage4.9 1
lineage2.2;lineage4 1
lineage2.2.1;lineage6.3 1
La1.7;lineage3.1;lineage4 1
lineage4.2.2.2 1
lineage2 1
lineage3.1.1 1
lineage4.1.1.1 1
lineage2.2.1;lineage4 1
lineage1.2.2.2 1
lineage1.1.3.1 1
lineage3.1 2
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage2.2.1.1;lineage4 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
spoligotype Counts
spoligotype Count
None 330
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR28044591 Sensitive lineage1.1.2 None
ERR987722 MDR-TB None
SRR1172857 Other None
ERR234659 Other None
ERR3275996 HR-TB lineage4.3.4.1 nl
ERR4814352 Other lineage2.2.1 None
SRR1048987 HR-TB lineage2.2.1 None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR926156 Sensitive lineage4.9 None
SAMN02360563 Pre-XDR-TB lineage2.2.2 None
SRR1048886 HR-TB lineage2.2.2;lineage4 None
SRR1049007 HR-TB lineage2.2.2 None
SRR1180226 HR-TB lineage4.9 None
ERR4797474 Sensitive lineage4.9 None
ERR4819781 Other lineage2.2.1 None
ERR6866022 Other lineage4.8;lineage4.9 None
SRR1013621 Pre-XDR-TB lineage2.2.2 None
SRR1144809 HR-TB lineage2.2.1 None
SRR1048965 HR-TB lineage2.2.1 None
SRR6045380 Other lineage2.1;lineage4.9 None
SRR1048980 HR-TB lineage3 None
SRR1049004 HR-TB lineage2.2.2 None
ERR4818347 Other lineage4.1.2 None
SRR1196566 Other lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
ERR323062 Sensitive lineage4.9 None
ERR4798823 HR-TB lineage4 None
SRR1048867 Pre-XDR-TB lineage2.2.2 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR3675275 Other lineage4.9 None
SRR1013589 HR-TB lineage2.2.1 None
ERR161034 HR-TB lineage4.3.4.2.1 None
SRR20969677 HR-TB La3;lineage2 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
SRR1013622 Pre-XDR-TB lineage2.2.2 None
SRR25827687 MDR-TB lineage1.1.2 None
ERR9119733 MDR-TB lineage2.2.1 None
SRR26399973 Other La3;lineage4.9 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR9117721 HR-TB La3;lineage1.1.2 None
SRR1792478 HR-TB La1.7.1 None
SRR9970980 HR-TB lineage4.1.2 None
SRR5341455 Sensitive lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR6358979 Other lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR702405 Sensitive lineage4.9 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR736848 Other lineage4.9 None
ERR4816964 Sensitive lineage4.9 None
SRR1013568 Pre-XDR-TB lineage2.2.2 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
SRR1173384 Other lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR2027263 Other lineage4 None
SAMN02360571 HR-TB lineage2.2.1;lineage2.2.2 None
SRR6789626 Other None
SRR29096194 Sensitive lineage4.9 None
ERR4821655 HR-TB lineage4.9 None
SAMN02360590 MDR-TB lineage2.2.2 None
ERR4816999 Other None
SRR6045219 HR-TB lineage4.9 None
ERR9119525 MDR-TB lineage4.6.2.2 None
SRR1048869 HR-TB lineage2.2.1;lineage2.2.2 None
SRR1013607 HR-TB lineage2.2.2 None
ERR4769474 HR-TB lineage4.9 None
ERR4797184 Sensitive lineage4.9 None
ERR4797588 MDR-TB lineage3 None
ERR216938 HR-TB La1.7;lineage4.9 None
ERR6359069 Sensitive lineage4.9 None
SAMN02360595 Pre-XDR-TB lineage2.2.2 None
SRR1013570 Pre-XDR-TB lineage2.2.1 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR1184380 Other lineage2.1;lineage4.9 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
SAMN02360574 HR-TB lineage2.2.1 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR4815441 HR-TB lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR3273109 HR-TB lineage4 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR926159 Sensitive lineage4.9 None
ERR5987263 MDR-TB lineage2.2.1 None
ERR4596902 MDR-TB lineage3 None
SAMN02360591 Pre-XDR-TB lineage2.2.2 None
SRR1013629 Pre-XDR-TB lineage2.2.2 None
SRR1172728 RR-TB La3 None
SRR8217918 HR-TB lineage4.9 None
ERR6866639 Other lineage4.9 None
ERR702406 Other lineage2.1 None
ERR4819546 HR-TB lineage3 None
ERR1063849 HR-TB lineage4.9 None
SRR1048988 HR-TB lineage2.2.1 None
SRR1049027 HR-TB lineage2.2.2;lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR323056 HR-TB lineage4.4.1.2 None
SRR1047993 HR-TB lineage2.2.1 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR1049026 HR-TB lineage2.2;lineage4.9 None
ERR4797193 HR-TB lineage1.1.2 None
SRR5341308 Sensitive lineage4.9 None
SRR1196571 Pre-XDR-TB lineage4.3.3 None
SAMN02360564 Pre-XDR-TB lineage2.2.1 None
ERR1034634 HR-TB lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR1183111 HR-TB lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR1048968 HR-TB lineage2.2.1;lineage2.2.2 None
ERR736834 Sensitive lineage4.9 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1013567 Pre-XDR-TB lineage2.2.2 None
SRR9971112 Other lineage2.2.1 None
SRR1049006 HR-TB lineage2.2.2;lineage4 None
SRR5341299 HR-TB lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR5341469 HR-TB lineage4.9 None
SRR1049023 HR-TB lineage4.9 None
SRR29096225 Sensitive lineage4.9 None
ERR212001 HR-TB None
SRR28119752 Other lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR181824 HR-TB lineage4.9 None
SRR12142341 HR-TB lineage2.1 None
SRR3675539 HR-TB lineage4.9;lineage7 None
ERR3445502 Sensitive lineage4.9;lineage7 None
ERR736875 HR-TB lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SAMN02360570 Pre-XDR-TB lineage2.2.1 None
SRR1184372 MDR-TB None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR4815471 Sensitive lineage4.9 None
ERR13265528 Other lineage4.9;lineage6.3 None
SRR1048997 HR-TB lineage2.2.1 None
SRR1144744 HR-TB lineage2.2.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1196768 MDR-TB None
ERR4818929 HR-TB lineage4.9 None
SRR6045359 Sensitive lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR987729 HR-TB lineage3.1.2.1;lineage3.1.2.2 None
SRR1172310 HR-TB lineage4.9 None
ERR6358755 Other lineage4.6.1.1 None
SRR18213713 HR-TB None
ERR4817893 Other La3;lineage4.8 None
SRR28119717 Other lineage4.9;lineage6.3 None
SRR1013590 HR-TB lineage2.2.1 None
SAMN02360583 HR-TB lineage2.2.2 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
ERR3283019 Other lineage2.1;lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
SRR1710057 Other lineage2.1 None
SRR1013577 HR-TB lineage2.2.2 None
SRR1184388 Other lineage2.1;lineage4.9 None
ERR502511 Sensitive lineage4.9 None
SRR1048993 HR-TB lineage4.9 None
SRR1159378 Other lineage4.9 None
ERR4819932 Other lineage4.7 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR3416776 Other lineage2.1 None
SRR1048994 HR-TB lineage4.9 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR11466072 Sensitive lineage4.3.4.2.1 None
SRR5341310 Other lineage1.1.2 None
SAMN02360580 HR-TB lineage2.2.1 None
ERR4831617 MDR-TB lineage2.2.1 None
SAMN02360556 Pre-XDR-TB lineage2.2.2 None
SAMN02360586 HR-TB lineage2.2.1 None
ERR323107 Sensitive lineage4.9 None
SRR5341425 Other lineage4.9 None
ERR4798099 Other lineage4.9 None
ERR6359066 HR-TB lineage4.9 None
SRR3675235 Sensitive lineage4.9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
SRR1048995 HR-TB lineage4.5 None
ERR161037 Other lineage4.9 None
SRR10315567 HR-TB lineage2.2.1 None
SRR1048982 HR-TB lineage2.2.1.1 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
SRR5341461 HR-TB lineage4.9 None
SAMN02360585 HR-TB lineage4.5 None
SRR1013554 MDR-TB lineage2.2.2;lineage4 None
ERR751326 Other lineage4.9 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR1048986 HR-TB lineage2.2.1 None
SRR1013578 HR-TB lineage2.2.2;lineage4 None
SRR1048975 HR-TB lineage2.2.1 None
ERR4816466 HR-TB lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
SRR1172817 Other La3 None
SRR9970978 Sensitive La1;lineage4.1.2 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR176751 Other lineage4.9 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
ERR323043 Other lineage2.1;lineage4.9 None
SRR5341467 Other lineage4.9 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
SRR3675585 Sensitive lineage4.9 None
SRR5341298 Sensitive lineage4.9 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR23961559 Other La1.7;lineage4.2 None
SAMN02360562 Pre-XDR-TB lineage4.4.2 None
SRR1184294 Other lineage4.9 None
ERR4797264 Sensitive lineage4.9 None
SRR6045233 Other M.canetti;lineage4.9 None
ERR473334 HR-TB lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR1048966 MDR-TB lineage2.2.1 None
SRR1013630 Pre-XDR-TB lineage2.2.2;lineage4 None
SRR1184381 MDR-TB None
ERR13265833 Other lineage4.9 None
SRR25827682 Other None
SRR28351339 MDR-TB lineage4 None
SRR28119805 Other lineage4.9 None
ERR4817060 Other None
SRR1048981 HR-TB lineage3 None
SRR3675572 Other None
SRR5341333 Other lineage2.1;lineage4.9 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
SRR3675465 Other lineage4.9;lineage6.3 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SAMN02360577 HR-TB lineage3 None
SRR1180137 Other lineage2.2.1 None
SRR1173778 Other lineage4.9 None
ERR137286 Other lineage4.9 None
ERR323066 Sensitive lineage4.9 None
ERR3468577 Sensitive None
SRR1196583 Other lineage4.9 None
ERR3797029 Other lineage4.9 None
ERR736872 HR-TB lineage4.9 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR29096795 Sensitive lineage4.9 None
ERR736817 HR-TB lineage4.3.4 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
SRR1048991 HR-TB lineage2;lineage4.9 None
ERR1063896 Sensitive None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR29055629 MDR-TB La3;lineage2.2.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1013601 HR-TB lineage2.2.1 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
SRR1183049 RR-TB lineage2.2 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3797069 Other lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
ERR323039 HR-TB La2;lineage4.9 None
ERR13267017 Pre-XDR-TB lineage2.2.1 None
SRR3675495 Other lineage2.1;lineage4.9 None
SRR1049005 MDR-TB lineage2.2.2 None
ERR926162 Sensitive lineage4.9 None
SAMN02360581 HR-TB lineage2.2.1 None
SRR5341300 HR-TB lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
ERR323115 Sensitive lineage4.9 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR4815604 Other None
ERR736856 Sensitive lineage4.9 None
SRR10809074 Sensitive lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
ERR502510 Sensitive lineage4.9 None
SRR1048983 HR-TB lineage2.2.1.1 None
SRR1048866 Pre-XDR-TB lineage4.4.2 None
SRR6046133 HR-TB lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
SRR1047996 MDR-TB lineage2.2.2 None
SRR1048885 HR-TB lineage2.2;lineage4 None
SRR29016901 Other La3;lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR2513470 Other lineage4.2.2.2 None
SRR29051077 Other lineage4.9 None
SRR1049040 HR-TB lineage2 None
ERR124636 Sensitive lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
SRR1196474 Other lineage3.1.1 None
SRR1013569 Pre-XDR-TB lineage2.2.1 None
SRR1196546 Other lineage4.9 None
SRR1048998 HR-TB lineage2.2.1 None
SRR6511621 Sensitive lineage4.9 None
SRR29096527 Sensitive lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
SRR3675236 Other None
SRR29096195 Sensitive lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
SRR1048870 HR-TB lineage2.2.1;lineage2.2.2 None
SRR1049041 HR-TB lineage2.2.1;lineage4 None
SRR1013603 HR-TB lineage2.2.1 None
ERR4797201 Other lineage1.2.2.2 None
ERR4800341 Other lineage3 None
SRR5341453 Other lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR9117709 Other None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR1048853 HR-TB lineage2;lineage4.9 None
ERR13265748 Other lineage4.9;lineage6.3 None
SRR28351442 HR-TB lineage3.1 None
SRR29050859 Other lineage4.9 None
SRR1184346 HR-TB lineage3.1 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
SRR1013599 HR-TB lineage2.2.1.1;lineage4 None
SRR3675234 Other La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR6045892 Sensitive lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
ERR4024991 Other lineage4.8;lineage4.9 None
ERR6359070 Sensitive lineage4.9 None
SAMN02360579 HR-TB lineage2.2.1.1 None
SRR1048985 HR-TB lineage2.2.1 None
SRR3675221 Other lineage4.9 None