Rv1908c - c.384G>C


Drug resistance types
10 Sensitive 5 RR-TB 158 HR-TB 32 MDR-TB 21 Pre-XDR-TB 3 XDR-TB 87 Other
lineage Counts
lineage Count
lineage2.2.1 34
lineage2.1;lineage6.3 2
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.9;lineage7 3
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
lineage2;lineage4.9 2
lineage4.3.4.2.1 2
lineage2.2.2 18
lineage4.9 86
lineage2.1;lineage4.9 15
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
La1.7;lineage4.9;lineage7 1
lineage4.3.4.1 1
La3;lineage2.1;lineage4.9;lineage6.3 4
lineage4.5 2
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
lineage4.9;lineage9 1
lineage2.2;lineage4.9 1
lineage4 4
lineage4.4.1.1 1
lineage2.1;lineage4.9;lineage6.3 8
lineage3.1 2
lineage3.1.1 1
La1.7;lineage4.9 3
lineage2.2.1;lineage4 1
lineage3 7
M.canetti;lineage4.9 2
La3;lineage2 1
La1;lineage4.1.2 1
lineage4.1.2 2
lineage2.1 5
lineage4.4.1.2 1
lineage4.8;lineage4.9 2
lineage4.2;lineage4.6.3;lineage4.9.1 1
M.canetti;lineage4.9;lineage9 1
lineage2.2.1.1 3
lineage4.9;lineage6.3 6
18
La3;lineage2.1;lineage6.3 1
lineage2.1;lineage4.9;lineage7 1
La3;lineage4.8 1
La3;lineage2.1;lineage4.9 2
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La1.7.X-unk4;lineage4.9 1
M.canetti;lineage2.1;lineage4.9 2
La3;lineage4.9 1
lineage4.7 1
La3;lineage1.1.2 1
La1.7.1 1
La1.2.BCG;La1.8.1 1
lineage3.1.2.1;lineage3.1.2.2 1
lineage4.4.2 2
lineage2.2.1;lineage6.3 1
lineage1.1.2 4
lineage4.2.2.2 1
lineage2.2.1;lineage2.2.2 4
lineage2 1
lineage2.1;lineage4.3.2;lineage4.9 1
lineage2.1;lineage4.1.4;lineage4.9 1
lineage4.6.2.2 2
lineage2.2.2;lineage4 5
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
La1.7.1;La1.7.X-unk4;lineage7 1
lineage1.2.2.2 1
M.canetti;lineage2.1;lineage6.3 1
La3 2
lineage2.2.1.1;lineage4 1
La1.7;lineage4.2 1
M.canetti;lineage2.2 2
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
La1.7;lineage4.9;lineage6 1
lineage4.3.4 1
La3;M.canetti;lineage2.2.1 1
lineage2.2 1
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
lineage4.6.1.1 1
lineage2.2.1;lineage3 1
La1.7;lineage3.1;lineage4 1
lineage2.2;lineage4 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage4.1.1.1 1
lineage2.2.2;lineage4.9 1
La2;lineage4.9 1
lineage4.3.3 1
lineage4.2;lineage4.8.1;lineage4.9 1
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage1.1.3.1 1
La1.2.BCG 1
La1.7;M.canetti;lineage4.9 1
spoligotype Counts
spoligotype Count
None 316
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR1013589 HR-TB lineage2.2.1 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR4831616 MDR-TB lineage2.2.1 None
SRR3675539 MDR-TB lineage4.9;lineage7 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
SRR1048991 HR-TB lineage2;lineage4.9 None
ERR161034 HR-TB lineage4.3.4.2.1 None
SRR1013577 HR-TB lineage2.2.2 None
ERR4816964 HR-TB lineage4.9 None
SRR1184388 Other lineage2.1;lineage4.9 None
SRR1013601 HR-TB lineage2.2.1 None
SRR1173629 Other lineage2.1;lineage4.9 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR6866639 HR-TB lineage4.9 None
SRR1048994 HR-TB lineage4.9 None
SRR1172310 MDR-TB lineage4.9 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
ERR3275996 HR-TB lineage4.3.4.1 nl
SRR1048985 HR-TB lineage2.2.1 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR1048995 HR-TB lineage4.5 None
SRR3675495 RR-TB lineage2.1;lineage4.9 None
SRR3675234 HR-TB La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
SRR1049026 HR-TB lineage2.2;lineage4.9 None
SRR3675216 Other lineage2.1;lineage4.9 None
ERR2027263 Other lineage4 None
ERR4798823 HR-TB lineage4 None
ERR4821655 HR-TB lineage4.9 None
SAMN02360590 MDR-TB lineage2.2.2 None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR1184346 HR-TB lineage3.1 None
SRR1048988 HR-TB lineage2.2.1 None
SAMN02360595 Pre-XDR-TB lineage2.2.2 None
SRR1048993 HR-TB lineage4.9 None
SRR1048998 HR-TB lineage2.2.1 None
SAMN02360574 HR-TB lineage2.2.1 None
ERR4815441 HR-TB lineage4.9 None
SRR1196474 Other lineage3.1.1 None
ERR1035122 HR-TB lineage4.9 None
ERR323062 HR-TB lineage4.9 None
SAMN02360580 HR-TB lineage2.2.1 None
SRR3675235 HR-TB lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR3445502 HR-TB lineage4.9;lineage7 None
SRR1049041 HR-TB lineage2.2.1;lineage4 None
ERR4769474 HR-TB lineage4.9 None
SRR1184294 Other lineage4.9 None
SRR1048986 HR-TB lineage2.2.1 None
SRR1013629 Pre-XDR-TB lineage2.2.2 None
ERR1063858 HR-TB lineage4.9 None
ERR176751 HR-TB lineage4.9 None
SAMN02360577 HR-TB lineage3 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
SRR10809074 HR-TB lineage4.9 None
SRR8217918 HR-TB lineage4.9 None
SRR1013569 Pre-XDR-TB lineage2.2.1 None
ERR4819546 HR-TB lineage3 None
SRR20969677 HR-TB La3;lineage2 None
SRR9970978 Other La1;lineage4.1.2 None
ERR4818347 Other lineage4.1.2 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR4797588 MDR-TB lineage3 None
SRR5341425 Other lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR502510 HR-TB lineage4.9 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6045892 Sensitive lineage4.9 None
ERR216938 HR-TB La1.7;lineage4.9 None
ERR5987263 MDR-TB lineage2.2.1 None
ERR6866022 HR-TB lineage4.8;lineage4.9 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR1034634 HR-TB lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
SRR6045233 Other M.canetti;lineage4.9 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR5341469 HR-TB lineage4.9 None
SRR1049023 HR-TB lineage4.9 None
ERR736856 HR-TB lineage4.9 None
ERR502511 HR-TB lineage4.9 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
SAMN02360579 HR-TB lineage2.2.1.1 None
SRR28119756 Other lineage4.9;lineage6.3 None
SRR1184381 MDR-TB None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR4815604 Other None
ERR4817060 Other None
ERR6358979 HR-TB lineage4.9 None
SRR1196583 Other lineage4.9 None
ERR3797029 Other lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR4797264 HR-TB lineage4.9 None
ERR736872 HR-TB lineage4.9 None
SRR3675555 MDR-TB lineage2.1;lineage4.9;lineage7 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR4817893 Other La3;lineage4.8 None
ERR4024991 HR-TB lineage4.8;lineage4.9 None
SAMN02360583 HR-TB lineage2.2.2 None
ERR6359070 Sensitive lineage4.9 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR1048965 HR-TB lineage2.2.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
ERR702405 HR-TB lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1048980 HR-TB lineage3 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR1159378 Other lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4818929 HR-TB lineage4.9 None
SRR26399973 Other La3;lineage4.9 None
ERR4819932 Other lineage4.7 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR9117721 HR-TB La3;lineage1.1.2 None
ERR4188247 HR-TB lineage4.9 None
SRR1792478 HR-TB La1.7.1 None
SRR9970980 HR-TB lineage4.1.2 None
SRR1047993 HR-TB lineage2.2.1 None
ERR4816466 HR-TB lineage4.9 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR926156 Other lineage4.9 None
SRR1144809 HR-TB lineage2.2.1 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR926162 Sensitive lineage4.9 None
ERR4831617 MDR-TB lineage2.2.1 None
SAMN02360581 HR-TB lineage2.2.1 None
SRR1013621 Pre-XDR-TB lineage2.2.2 None
SAMN02360556 Pre-XDR-TB lineage2.2.2 None
SRR1180226 HR-TB lineage4.9 None
SRR5341300 HR-TB lineage4.9 None
ERR323115 Sensitive lineage4.9 None
SRR3675465 Other lineage4.9;lineage6.3 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
SRR12142341 HR-TB lineage2.1 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR987729 MDR-TB lineage3.1.2.1;lineage3.1.2.2 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
SRR1048983 HR-TB lineage2.2.1.1 None
SRR1048866 Pre-XDR-TB lineage4.4.2 None
SRR1013603 HR-TB lineage2.2.1 None
SRR1048987 HR-TB lineage2.2.1 None
SAMN02360586 HR-TB lineage2.2.1 None
SRR6046133 HR-TB lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
ERR3797014 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
SRR5341310 Other lineage1.1.2 None
ERR2513470 Other lineage4.2.2.2 None
ERR323066 HR-TB lineage4.9 None
ERR124636 HR-TB lineage4.9 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR6359066 HR-TB lineage4.9 None
SRR1048869 HR-TB lineage2.2.1;lineage2.2.2 None
SRR1049040 HR-TB lineage2 None
SRR5341308 HR-TB lineage4.9 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
SRR1048982 HR-TB lineage2.2.1.1 None
SAMN02360562 Pre-XDR-TB lineage4.4.2 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
ERR502524 MDR-TB lineage4.9;lineage6.3 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR3273109 HR-TB lineage4 None
SRR3675585 HR-TB lineage4.9 None
SRR1013554 MDR-TB lineage2.2.2;lineage4 None
SRR1048870 HR-TB lineage2.2.1;lineage2.2.2 None
ERR4815471 HR-TB lineage4.9 None
ERR926159 Sensitive lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR1196566 Other lineage4.9 None
SRR1183111 HR-TB lineage4.9 None
SRR1048886 HR-TB lineage2.2.2;lineage4 None
ERR4814352 Other lineage2.2.1 None
SRR12416842 HR-TB lineage4.9 None
SRR1013590 HR-TB lineage2.2.1 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
SRR1048997 HR-TB lineage2.2.1 None
ERR736867 Other lineage2.1;lineage4.9 None
SRR5341455 Sensitive lineage4.9 None
ERR4797184 HR-TB lineage4.9 None
SAMN02360564 Pre-XDR-TB lineage2.2.1 None
SRR1013570 Pre-XDR-TB lineage2.2.1 None
ERR4797201 Other lineage1.2.2.2 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
SRR1180137 RR-TB lineage2.2.1 None
SRR3416776 Other lineage2.1 None
SRR5341467 Other lineage4.9 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR1172817 Other La3 None
SRR1013599 HR-TB lineage2.2.1.1;lineage4 None
SRR23961559 Other La1.7;lineage4.2 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR736834 HR-TB lineage4.9 None
SRR1144744 HR-TB lineage2.2.1 None
ERR4796929 Sensitive lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
SRR1013622 Pre-XDR-TB lineage2.2.2 None
ERR473334 HR-TB lineage4.9 None
ERR161037 HR-TB lineage4.9 None
SRR1013568 Pre-XDR-TB lineage2.2.2 None
SRR6045359 HR-TB lineage4.9 None
SRR28351442 HR-TB lineage3.1 None
SRR1184372 MDR-TB None
ERR9117709 Other None
SRR6789626 Other None
ERR234659 HR-TB None
ERR3468577 Sensitive None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR212001 HR-TB None
ERR137286 Other lineage4.9 None
SRR1013607 HR-TB lineage2.2.2 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR4797474 Other lineage4.9 None
ERR4800341 HR-TB lineage3 None
ERR736817 HR-TB lineage4.3.4 None
SRR25827687 MDR-TB lineage1.1.2 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4798099 HR-TB lineage4.9 None
SRR5341298 Other lineage4.9 None
SRR1710057 Other lineage2.1 None
SRR1183049 RR-TB lineage2.2 None
ERR3797069 Other lineage4.9 None
ERR702406 Other lineage2.1 None
ERR4596902 MDR-TB lineage3 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
ERR736848 Other lineage4.9 None
SRR1049004 HR-TB lineage2.2.2 None
SRR6046644 MDR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR6358755 Other lineage4.6.1.1 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
SRR25827497 XDR-TB lineage2.2.1;lineage3 None
SRR1173778 Other lineage4.9 None
SAMN02360571 HR-TB lineage2.2.1;lineage2.2.2 None
ERR11466072 Sensitive lineage4.3.4.2.1 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
SRR1048885 HR-TB lineage2.2;lineage4 None
SRR6045219 HR-TB lineage4.9 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR9119733 MDR-TB lineage2.2.1 None
SRR1173384 Other lineage4.9 None
SRR10315567 HR-TB lineage2.2.1 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SAMN02360570 Pre-XDR-TB lineage2.2.1 None
SRR5341461 HR-TB lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR6511621 HR-TB lineage4.9 None
SRR1048867 Pre-XDR-TB lineage2.2.2 None
SAMN02360591 Pre-XDR-TB lineage2.2.2 None
ERR1063862 HR-TB lineage4.9 None
ERR736875 HR-TB lineage4.9 None
ERR176793 Other lineage4.1.1.1 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
SRR1049027 HR-TB lineage2.2.2;lineage4.9 None
ERR751326 Other lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
SRR3675221 Other lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR323107 HR-TB lineage4.9 None
ERR4797193 HR-TB lineage1.1.2 None
ERR323039 MDR-TB La2;lineage4.9 None
SRR1013578 HR-TB lineage2.2.2;lineage4 None
SRR1048975 HR-TB lineage2.2.1 None
SRR9971112 HR-TB lineage2.2.1 None
ERR323108 HR-TB La1.7;lineage4.9 None
SRR5341453 Other lineage4.9 None
SRR1172728 RR-TB La3 None
ERR6359069 HR-TB lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR1049007 HR-TB lineage2.2.2 None
SRR1013567 Pre-XDR-TB lineage2.2.2 None
ERR4819781 Other lineage2.2.1 None
SRR1049005 MDR-TB lineage2.2.2 None
SAMN02360563 Pre-XDR-TB lineage2.2.2 None
SRR1048853 HR-TB lineage2;lineage4.9 None
SRR1196571 Pre-XDR-TB lineage4.3.3 None
SRR6044790 Other lineage2.1;lineage4.9 None
SRR1196546 Other lineage4.9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
SRR1048981 HR-TB lineage3 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
SRR1048968 HR-TB lineage2.2.1;lineage2.2.2 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
SRR1049006 HR-TB lineage2.2.2;lineage4 None
SAMN02360585 HR-TB lineage4.5 None
SRR1048966 MDR-TB lineage2.2.1 None
ERR181824 MDR-TB lineage4.9 None
SRR1013630 Pre-XDR-TB lineage2.2.2;lineage4 None
ERR8479578 HR-TB lineage1.1.3.1 None
SRR1047996 MDR-TB lineage2.2.2 None
SRR3675572 Other None
SRR28044591 Sensitive lineage1.1.2 None
ERR1063896 HR-TB None
SRR18213713 HR-TB None
ERR987722 MDR-TB None
SRR25827682 Other None
SRR28351339 MDR-TB lineage4 None
SRR1172857 Other None
SRR3675236 Other None
SRR28119805 Other lineage4.9 None
ERR4816999 Other None
SRR1196768 MDR-TB None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR3675275 Other lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None