Rv0006 - c.427_429delAGGinsCGT


Drug resistance types
68 Sensitive 3 RR-TB 78 HR-TB 7 MDR-TB 3 Pre-XDR-TB 0 XDR-TB 72 Other
lineage Counts
lineage Count
87
lineage4.1.1 2
lineage4.9 30
lineage2.2.1 5
lineage4.1.2.1 3
lineage4 68
lineage4.3 1
lineage2.2 3
La1.8.1 2
lineage4.1.1.2 1
lineage5.1.4 1
lineage4;lineage1.1 1
lineage4.7 1
lineage4.2.1 1
lineage4.4.1.1 1
lineage5.2 2
lineage4.3.4.1 2
lineage4.1.2 1
lineage4.1.1.3 1
lineage4.6.1.1 2
lineage4.1.3 2
lineage4;lineage3.1 1
lineage2 1
lineage3 1
lineage4.5 2
lineage1.1.2 2
lineage4.3.2 1
La3 1
lineage3.1 1
lineage4.3.3 1
La1.7.1 1
lineage4;lineage2.2 1
lineage4.9;La3 1
spoligotype Counts
spoligotype Count
None 231
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR3675465 HR-TB None
ERR176793 Other lineage4.1.1 None
ERR4815604 HR-TB None
SRR3675234 Other None
SRR3675209 Sensitive lineage4.9 None
SRR3675221 HR-TB None
ERR4814352 HR-TB lineage2.2.1 None
SRR3675236 HR-TB None
SRR3675232 Other lineage4.1.2.1 None
ERR4815489 Sensitive lineage4.9 None
SRR3675311 Other None
SRR3675265 Other lineage4 None
SRR3675284 HR-TB lineage4.9 None
ERR176643 HR-TB None
ERR176568 Other lineage4.3 None
SRR3675292 Sensitive lineage4 None
SRR3675527 RR-TB lineage4.9 None
SRR3675456 HR-TB None
SRR7496472 Other None
ERR4816999 Other None
ERR2027263 Other lineage4 None
ERR212033 HR-TB None
ERR212034 HR-TB None
ERR4816585 Other lineage2.2 None
SRR3675555 HR-TB None
ERR4817060 RR-TB None
SRR3675572 Other None
SRR5007188 Other lineage4 None
ERR4818021 Other La1.8.1 None
ERR4818110 Sensitive lineage4.9 None
ERR234659 HR-TB None
ERR4818252 Other lineage4.1.1.2 None
ERR4819051 Other lineage4 None
ERR2513283 Other lineage5.1.4 None
ERR4818615 Other None
SRR5341373 HR-TB lineage4 None
SRR5341313 HR-TB None
ERR4819322 Other lineage4;lineage1.1 None
SRR5341432 HR-TB lineage4 None
ERR4819781 Other lineage2.2.1 None
SRR5341400 HR-TB lineage4 None
SRR5341293 HR-TB lineage4 None
SRR5341302 HR-TB None
ERR4820854 Other lineage4.1.2.1 None
ERR6359082 Other lineage4.9 None
ERR4819932 Other lineage4.7 None
SRR5341315 Sensitive None
SRR5341333 HR-TB None
SRR6045555 HR-TB None
ERR2693231 Other None
ERR2693230 Other None
ERR2693257 Other None
SRR6045503 HR-TB None
ERR4821655 Sensitive lineage4 None
SRR6044876 Sensitive lineage4 None
SRR6044780 Other lineage4.9 None
SRR6044875 HR-TB lineage4.9 None
SRR6045706 Sensitive lineage4 None
SRR6046133 HR-TB None
SRR6044790 HR-TB None
SRR6044855 Other lineage4.9 None
SRR6044890 Other lineage4.9 None
SRR6045002 MDR-TB lineage4.9 None
SRR6045010 Other lineage4 None
SRR6046259 Sensitive lineage4.9 None
SRR6045217 Other lineage4 None
SRR6045191 Sensitive lineage4.9 None
SRR6046066 HR-TB None
SRR6045371 Sensitive lineage4.2.1 None
SRR6046253 HR-TB lineage4.9 None
SRR6046245 Other lineage4.9 None
SRR6046382 HR-TB lineage2.2.1 None
SRR6046305 Other lineage4.9 None
SRR6046385 Other lineage4.9 None
SRR6046362 HR-TB None
SRR6046460 HR-TB None
SRR6046397 Other None
SRR6046482 HR-TB None
SRR6046540 HR-TB None
SRR6046521 Other lineage4.4.1.1 None
SRR6046594 HR-TB lineage4 None
ERR4872094 MDR-TB lineage5.2 None
SRR6046604 Sensitive lineage2.2.1 None
SRR6046897 Sensitive lineage4 None
ERR4831117 HR-TB None
SRR6046611 HR-TB lineage4.9 None
SRR6046802 Other lineage4 None
SRR7131023 Other lineage4.1.2.1 None
SRR6789626 Other None
ERR11465353 Sensitive lineage4.3.4.1 None
SRR7496509 Other None
SRR7496517 Other None
SRR9970978 Sensitive lineage4.1.2 None
ERR323108 HR-TB lineage4 None
SRR7535086 Other None
ERR323107 Other lineage4 None
ERR11466044 Other lineage4.1.1.3 None
ERR1023525 HR-TB lineage4 None
ERR3283051 Other lineage4.9 None
ERR11465352 Sensitive lineage4.3.4.1 None
ERR1063839 HR-TB lineage2.2 None
ERR323115 Sensitive lineage4 None
ERR3283024 Other None
ERR3283031 HR-TB None
ERR1063883 Sensitive lineage4 None
ERR1199132 Sensitive lineage4.6.1.1 None
ERR3283014 HR-TB None
ERR3283028 Other None
ERR3283027 HR-TB None
ERR3283043 Other lineage4.9 None
ERR3283036 HR-TB None
ERR3283047 HR-TB None
ERR349264 Sensitive lineage4 None
ERR3283057 HR-TB lineage4 None
ERR349266 Sensitive lineage4.9 None
ERR349265 Sensitive lineage4 None
ERR349300 Sensitive lineage4.9 None
ERR349298 Sensitive lineage4 None
ERR349299 Sensitive lineage4 None
ERR5336148 Other None
ERR363421 Sensitive lineage4 None
ERR363426 Sensitive lineage4 None
ERR363437 Sensitive lineage4 None
ERR363446 Sensitive lineage4 None
ERR363445 Sensitive lineage4 None
ERR349330 Sensitive lineage4 None
ERR363479 Sensitive lineage4 None
ERR363447 Sensitive lineage4 None
ERR363474 Sensitive lineage4 None
ERR363449 Sensitive lineage4 None
ERR363453 Sensitive lineage4 None
ERR363456 Sensitive lineage4 None
ERR363490 Sensitive lineage4 None
ERR363499 Sensitive lineage4 None
ERR363498 Sensitive lineage4 None
ERR363500 Sensitive lineage4 None
ERR373946 Sensitive lineage4 None
ERR369159 Sensitive lineage4 None
ERR369163 Sensitive lineage4 None
ERR363502 Sensitive lineage4 None
ERR363509 Sensitive lineage4 None
ERR369158 Sensitive lineage4 None
ERR369160 Sensitive lineage4.9 None
ERR369162 Sensitive lineage4 None
ERR373945 HR-TB lineage4 None
ERR373947 Sensitive lineage4 None
ERR3797014 Other None
ERR3797065 MDR-TB lineage4 None
ERR3797036 HR-TB None
ERR3797044 Other None
ERR3797017 Other None
ERR3797048 HR-TB None
ERR3797079 Sensitive lineage4 None
ERR3797061 Other None
ERR3797069 Other None
ERR3797063 HR-TB None
ERR3797073 HR-TB La1.8.1 None
ERR3797064 Sensitive None
ERR387051 HR-TB None
ERR3797087 Sensitive lineage4 None
ERR3804169 HR-TB lineage4.1.3 None
ERR405209 Sensitive lineage4 None
ERR400326 Sensitive lineage4 None
ERR400345 Other lineage4 None
ERR4178226 Sensitive lineage4 None
ERR405219 HR-TB lineage4;lineage3.1 None
ERR473323 HR-TB lineage4.9 None
ERR4188247 HR-TB None
ERR4407463 HR-TB None
ERR473332 Other lineage4 None
ERR4811030 Sensitive None
ERR4797054 Pre-XDR-TB lineage2 None
ERR4798431 HR-TB None
ERR4800341 Other lineage3 None
ERR4811031 Sensitive lineage4.5 None
ERR4796929 Sensitive lineage4 None
ERR4797193 HR-TB lineage1.1.2 None
ERR4797313 HR-TB None
ERR4799025 Pre-XDR-TB None
ERR4799513 HR-TB lineage2.2 None
ERR4799547 Sensitive lineage2.2.1 None
ERR6866547 Sensitive lineage4 None
ERR6358979 Other None
ERR6865502 Sensitive lineage4 None
ERR6359045 HR-TB None
ERR6866807 HR-TB lineage4 None
ERR736856 HR-TB lineage4 None
ERR702404 HR-TB None
ERR736848 HR-TB None
ERR7910877 MDR-TB lineage4.1.1 None
ERR736874 HR-TB None
ERR9786611 HR-TB lineage4.1.3 None
ERR9117709 HR-TB None
ERR9117721 HR-TB lineage1.1.2 None
ERR9117805 Other lineage4.3.2 None
ERR9634265 Sensitive None
ERR9119500 MDR-TB lineage5.2 None
ERR987765 Sensitive lineage4.6.1.1 None
SRR10808805 Sensitive None
SRR10809074 Sensitive lineage4 None
SRR1167384 Other lineage4 None
SRR1169249 Other La3 None
SRR1169194 Other None
SRR1172234 Other None
SRR1169306 Other None
SRR1173400 Other None
SRR1172951 Other None
SRR1184294 HR-TB None
SRR1184346 HR-TB lineage3.1 None
SRR16157123 Other lineage4.9 None
SRR1184381 MDR-TB None
SRR1184388 Other None
SRR1196566 HR-TB None
SRR1196571 Pre-XDR-TB lineage4.3.3 None
SRR1196768 MDR-TB None
SRR1184380 HR-TB None
SRR1196546 HR-TB None
SRR14782405 HR-TB None
SRR1792478 HR-TB La1.7.1 None
SRR19295647 Sensitive lineage4.9 None
SRR18213713 HR-TB lineage4.5 None
SRR8692905 HR-TB None
SRR19303884 HR-TB None
SRR8692790 RR-TB lineage4 None
SRR8692822 Other lineage4.9 None
SRR8692879 HR-TB lineage4.9 None
SRR8692893 Other lineage4.9 None
SRR8692887 Other None
SRR8692863 Other lineage4;lineage2.2 None
SRR26159035 Sensitive lineage4.9 None
SRR26399973 Other lineage4.9;La3 None