Rv0006 - c.427_429delAGGinsCGT


Drug resistance types
38 Sensitive 0 RR-TB 14 HR-TB 2 MDR-TB 0 Pre-XDR-TB 0 XDR-TB 63 Other
lineage Counts
lineage Count
lineage4.9 34
12
lineage1.1.2 1
La1;lineage4.1.2 1
lineage4.3.4.1 2
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 1
La3;lineage4.9 8
lineage4.1.2.1 1
lineage4.9;lineage6.3 6
lineage2.1;lineage4.9 10
La1.2.BCG;La1.8.1 1
La3;lineage4 1
La1.7;lineage4.9;lineage7 2
La1.7;lineage4.9 4
lineage2.1;lineage4.9;lineage6.3 3
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.1.1.2 1
lineage2.2 2
lineage5.2 2
lineage2.2.1 3
lineage4.9;lineage7 1
lineage2.1;lineage4.9;lineage7 1
lineage4.2;lineage4.6.3;lineage4.9 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage4.2;lineage4.6.3;lineage4.9.1 1
lineage4.6.1.1 1
La1.6;La3;lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage4.4.1.1 1
lineage4 1
lineage4.1.3 1
lineage2.1;lineage6.3 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.5 1
lineage4.8 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage4.3.4.2 1
lineage4.1.1.3 1
lineage3 1
spoligotype Counts
spoligotype Count
None 117
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR926154 Sensitive lineage4.9 None
ERR9117709 Other None
ERR4797193 HR-TB lineage1.1.2 None
SRR9970978 Sensitive La1;lineage4.1.2 None
ERR11465352 Sensitive lineage4.3.4.1 None
ERR11465353 Sensitive lineage4.3.4.1 None
SRR1184294 Other lineage4.9 None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR3797070 Other lineage4.9 None
SRR3675221 Other lineage4.9 None
ERR926156 Sensitive lineage4.9 None
SRR19295647 Sensitive lineage4.9 None
ERR926165 Sensitive lineage4.9 None
SRR1167384 Other La3;lineage4.9 None
SRR3675572 Other None
ERR6866807 Other lineage4.9 None
SRR3675232 Other lineage4.1.2.1 None
SRR3675465 Other lineage4.9;lineage6.3 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR4407463 HR-TB None
ERR926157 Sensitive lineage4.9 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
ERR4811030 Sensitive lineage4.9 None
SRR18213713 HR-TB None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR3283028 Other La3;lineage4 None
SRR3675214 Other lineage4.9 None
ERR6358979 Other lineage4.9 None
SRR5341432 Sensitive La1.7;lineage4.9;lineage7 None
ERR323108 HR-TB La1.7;lineage4.9 None
SRR3675495 Other lineage2.1;lineage4.9 None
SRR6044790 Other lineage2.1;lineage4.9 None
SRR1165628 Other La3;lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1169249 Other lineage4.9 None
SRR10809074 Sensitive lineage4.9 None
ERR3283014 Sensitive La3;lineage4.9 None
SRR8692887 Other None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR4819051 Sensitive lineage4.9 None
SRR6789626 Other None
ERR4818252 Sensitive lineage4.1.1.2 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR926161 Sensitive lineage4.9 None
SRR6044876 Sensitive lineage4.9 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
ERR363499 Sensitive lineage4.9 None
SRR7535086 Other None
ERR176643 Other La3;lineage4.9 None
SRR6046594 Sensitive lineage4.9 None
SRR28119827 Other La3;lineage4.9 None
SRR7496509 Other None
ERR4799513 HR-TB lineage2.2 None
SRR7496472 Other lineage4.9 None
ERR9119500 MDR-TB lineage5.2 None
ERR234659 Other None
ERR4814352 Other lineage2.2.1 None
SRR3675539 HR-TB lineage4.9;lineage7 None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
SRR5341333 Other lineage2.1;lineage4.9 None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
SRR6045503 Sensitive lineage4.9 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR7496517 Other None
ERR987765 Sensitive lineage4.6.1.1 None
ERR2693231 Other La1.6;La3;lineage4.6.4;lineage4.9 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR323107 Sensitive lineage4.9 None
ERR349300 Sensitive lineage4.9 None
ERR4815604 Other None
ERR926160 Sensitive lineage4.9 None
ERR736856 Sensitive lineage4.9 None
ERR13264981 Sensitive La1.7;lineage4.9 None
SRR6046521 Other lineage4.4.1.1 None
ERR3797063 Sensitive La3;lineage4.9 None
SRR3675236 Other None
SRR3675524 Other lineage4.9;lineage6.3 None
SRR29017461 Other La3;lineage4.9 None
ERR3283044 Other lineage4 None
ERR3804169 HR-TB lineage4.1.3 None
ERR13265748 Other lineage4.9;lineage6.3 None
ERR971389 Sensitive lineage4.9 None
ERR4872094 MDR-TB lineage5.2 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR6045706 Sensitive lineage4.9 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR212034 HR-TB La1.7;lineage4.9 None
ERR3797087 Sensitive lineage4.9 None
ERR4819781 Other lineage2.2.1 None
SRR6045555 Other lineage4.9 None
SRR6046397 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR6046382 Sensitive lineage2.2.1 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR13265528 Other lineage4.9;lineage6.3 None
ERR926155 Sensitive lineage4.9 None
ERR4811031 Sensitive lineage4.5 None
ERR387051 Other lineage4.9 None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR4816585 Other lineage2.2 None
ERR4799025 Other lineage4.8 None
SRR29050859 Other lineage4.9 None
ERR363449 Sensitive lineage4.9 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR216938 HR-TB La1.7;lineage4.9 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR9634265 Sensitive lineage4.3.4.2 None
ERR11466044 Other lineage4.1.1.3 None
ERR4800341 Other lineage3 None
SRR26159035 Sensitive lineage4.9 None