Rv3596c - c.1863G>C
Drug resistance types
28 Sensitive
5 RR-TB
78 HR-TB
12 MDR-TB
2 Pre-XDR-TB
0 XDR-TB
58 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8;lineage4.9 | 2 |
| lineage4.9 | 115 |
| lineage1.1.1;lineage4 | 1 |
| lineage3 | 2 |
| La1.2.BCG | 1 |
| lineage2.2.1 | 11 |
| lineage1.1.3.1 | 1 |
| La1.8.1 | 2 |
| lineage1.2.1.1 | 1 |
| lineage4.3.4.2.1 | 5 |
| lineage4.9;lineage6.1.3 | 1 |
| lineage1;lineage4.9 | 1 |
| La1;lineage4.9 | 1 |
| La1.7.1;lineage4.9 | 1 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage4.3.4.1 | 1 |
| La1.7;lineage4.9 | 2 |
| lineage4.1.1.2 | 1 |
| lineage4.3.4 | 1 |
| La1.7.1 | 1 |
| lineage4.1.2 | 1 |
| lineage4.3.3 | 2 |
| lineage2.2.1.1 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4 | 1 |
| lineage1.2.1.2 | 1 |
| La1.3 | 1 |
| lineage4.9;lineage7 | 1 |
| lineage1.1.2 | 2 |
| lineage4.1.2.1 | 1 |
| lineage4.2.1 | 1 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| La1;lineage4.1.2 | 1 |
| lineage6.1.3 | 4 |
| lineage2.2.1;lineage4.9 | 1 |
| 1 | |
| lineage3.1.3 | 1 |
| lineage2.2.2 | 1 |
| lineage2.2.1;lineage4 | 1 |
| lineage2.2;lineage4.9 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.4.1.1 | 1 |
| lineage4.6.2.2 | 1 |
| lineage4.4.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 183 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR6866022 | HR-TB | lineage4.8;lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR4831638 | Sensitive | lineage1.1.1;lineage4 | None | SRR5341299 | HR-TB | lineage4.9 | None | ERR3283021 | MDR-TB | lineage4.9 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR1915487 | Other | La1.2.BCG | None | ERR736856 | HR-TB | lineage4.9 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR502511 | HR-TB | lineage4.9 | None | ERR4769442 | Sensitive | lineage4.9 | None | ERR8479578 | HR-TB | lineage1.1.3.1 | None | ERR4816852 | Other | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR702405 | HR-TB | lineage4.9 | None | SRR1159378 | Other | lineage4.9 | None | SRR1791747 | Other | La1.8.1 | None | ERR926165 | Other | lineage4.9 | None | SRR7535082 | Other | lineage4.9 | None | ERR926156 | Other | lineage4.9 | None | ERR4816322 | Other | lineage4.9 | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR176741 | Other | lineage4.9 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR736848 | Other | lineage4.9 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | ERR323115 | Sensitive | lineage4.9 | None | SRR5341384 | HR-TB | lineage4.9 | None | ERR1063883 | HR-TB | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | ERR4821655 | HR-TB | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR124636 | HR-TB | lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | SRR5341308 | HR-TB | lineage4.9 | None | ERR926160 | Other | lineage4.9 | None | SRR10315567 | HR-TB | lineage2.2.1 | None | ERR400336 | Sensitive | lineage4.9 | None | SRR6511621 | HR-TB | lineage4.9 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR4815471 | HR-TB | lineage4.9 | None | ERR4796254 | Other | lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR10809074 | HR-TB | lineage4.9 | None | ERR6359069 | HR-TB | lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | ERR473332 | Other | lineage4.9 | None | ERR212125 | HR-TB | lineage4.9 | None | ERR502510 | HR-TB | lineage4.9 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR11465152 | Sensitive | lineage4.3.4.1 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | ERR926155 | Other | lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | ERR161037 | HR-TB | lineage4.9 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR4797264 | HR-TB | lineage4.9 | None | ERR779852 | HR-TB | lineage4.9 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4818252 | HR-TB | lineage4.1.1.2 | None | ERR4819357 | Sensitive | lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR4769493 | Other | lineage4.9 | None | ERR4816964 | HR-TB | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | ERR4188247 | HR-TB | lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR9970980 | HR-TB | lineage4.1.2 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | SRR6046141 | Other | lineage4.9 | None | ERR6866410 | HR-TB | lineage4.9 | None | SRR18909918 | Other | lineage2.2.1.1 | None | ERR4769433 | RR-TB | lineage4.9 | None | ERR926162 | Sensitive | lineage4.9 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR5341300 | HR-TB | lineage4.9 | None | ERR369161 | Sensitive | lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | ERR4769439 | HR-TB | lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | SRR7236177 | Other | La1.8.1 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR926158 | Sensitive | lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR3675580 | Sensitive | lineage4.9 | None | SRR5341461 | HR-TB | lineage4.9 | None | SRR6789624 | HR-TB | lineage4.1.1.3 | None | ERR2514552 | Sensitive | lineage3 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR3675585 | HR-TB | lineage4.9 | None | ERR926163 | Other | lineage4.9 | None | SRR5341387 | Other | lineage4.9 | None | SRR3675235 | HR-TB | lineage4.9 | None | ERR4769495 | Other | La1.3 | None | ERR3445502 | HR-TB | lineage4.9;lineage7 | None | ERR323107 | HR-TB | lineage4.9 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | SRR9613550 | HR-TB | lineage4.1.2.1 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR9971112 | HR-TB | lineage2.2.1 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | ERR6358951 | Sensitive | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR19295647 | HR-TB | lineage4.9 | None | SRR9970978 | Other | La1;lineage4.1.2 | None | SRR1158918 | Other | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | SRR5341467 | Other | lineage4.9 | None | ERR1023236 | Other | lineage6.1.3 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | SRR6045892 | Sensitive | lineage4.9 | None | ERR736834 | HR-TB | lineage4.9 | None | ERR473334 | HR-TB | lineage4.9 | None | SRR5341469 | HR-TB | lineage4.9 | None | ERR11465510 | Sensitive | lineage4.3.4.2.1 | None | ERR108125 | RR-TB | lineage4.9 | None | ERR971389 | Other | lineage4.9 | None | ERR181824 | MDR-TB | lineage4.9 | None | ERR1063896 | HR-TB | None | SRR6045795 | Other | lineage2.2.1 | None | ERR137286 | Other | lineage4.9 | None | ERR6358979 | HR-TB | lineage4.9 | None | ERR3797029 | Other | lineage4.9 | None | ERR4797474 | Other | lineage4.9 | None | ERR4818710 | Sensitive | lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR736872 | HR-TB | lineage4.9 | None | ERR176651 | Other | lineage4.9 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | ERR4024991 | HR-TB | lineage4.8;lineage4.9 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR6359070 | Sensitive | lineage4.9 | None | ERR4798099 | HR-TB | lineage4.9 | None | ERR9787336 | RR-TB | lineage6.1.3 | None | ERR369151 | Other | lineage4.9 | None | ERR2693252 | HR-TB | lineage4.9 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | ERR6866639 | HR-TB | lineage4.9 | None | SRR6045832 | Other | lineage4.9 | None | ERR926154 | Sensitive | lineage4.9 | None | ERR11465628 | Sensitive | lineage4.3.4.2.1 | None | ERR926157 | Other | lineage4.9 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR11466072 | Sensitive | lineage4.3.4.2.1 | None | SRR5341310 | Other | lineage1.1.2 | None | ERR323066 | HR-TB | lineage4.9 | None | SRR11662694 | Other | lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | ERR1035122 | HR-TB | lineage4.9 | None | ERR323062 | HR-TB | lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None | ERR751326 | Other | lineage4.9 | None | ERR176779 | HR-TB | lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None | ERR323037 | Other | lineage4.9 | None | ERR736831 | Other | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR5341453 | Other | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR3797047 | MDR-TB | lineage4.9 | None | SRR3675246 | Other | lineage4.9 | None | ERR4797184 | HR-TB | lineage4.9 | None | SRR10808730 | Other | lineage4.9 | None | ERR9787153 | Other | lineage6.1.3 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None |
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