Rv3596c - c.1863G>C
Drug resistance types
63 Sensitive
8 RR-TB
50 HR-TB
19 MDR-TB
12 Pre-XDR-TB
0 XDR-TB
59 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4 | 53 |
| 37 | |
| lineage4.9 | 47 |
| lineage4;lineage3.1 | 1 |
| La1.3 | 6 |
| lineage4.9;La1.3 | 2 |
| lineage2.2.2 | 1 |
| lineage1.1.2 | 2 |
| lineage2.2.1 | 18 |
| lineage4.4.1.1 | 1 |
| lineage4.3.4 | 1 |
| lineage1.1.3.1 | 1 |
| lineage6.1.3 | 2 |
| lineage6 | 1 |
| lineage4.6.1.2 | 2 |
| lineage4.2.1 | 2 |
| La1.7.1 | 1 |
| La1.8.1 | 1 |
| lineage2.2.1.1 | 3 |
| lineage1.2.1.2 | 1 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage1.2.1.1 | 1 |
| lineage4.3.4.2.1 | 5 |
| lineage2.1 | 2 |
| lineage4.6.2.2 | 2 |
| lineage4.1.1.2 | 1 |
| lineage3.1.3 | 1 |
| lineage4.3.3 | 2 |
| lineage3 | 2 |
| lineage3.1.1 | 1 |
| lineage4.9;lineage2.1 | 1 |
| lineage4.1 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.1.2 | 2 |
| lineage4.1.2.1 | 1 |
| lineage4.7 | 1 |
| lineage4.8 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.4.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 211 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3273109 | MDR-TB | lineage4 | None | ERR3445504 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3283046 | MDR-TB | lineage4.9 | None | ERR3445503 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3797081 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR3797047 | HR-TB | lineage4 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR400336 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR4024991 | Other | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4188247 | HR-TB | None | ERR473334 | HR-TB | lineage4.9 | None | ERR473303 | Sensitive | lineage4.9 | None | ERR473332 | Other | lineage4 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4769408 | Other | La1.3 | None | ERR473367 | Sensitive | lineage4.9 | None | ERR4769419 | Other | lineage4.9 | None | ERR4769518 | Sensitive | lineage4.9 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769514 | Other | La1.3 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769495 | Other | La1.3 | None | ERR4769516 | Other | La1.3 | None | ERR4769552 | Other | La1.3 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4769555 | Other | La1.3 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4809333 | Pre-XDR-TB | lineage2.2.2 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4797264 | Sensitive | None | ERR4797474 | Other | None | ERR4798099 | Other | None | ERR4799378 | Sensitive | lineage4 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | ERR6358951 | HR-TB | lineage4 | None | ERR5865379 | Pre-XDR-TB | lineage2.2.1 | None | ERR6866022 | Other | None | ERR6358979 | Other | None | ERR6359070 | Other | lineage4.9 | None | ERR6359069 | Other | lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR6866410 | Sensitive | None | ERR6866547 | Sensitive | lineage4 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR6866639 | Other | None | ERR736875 | HR-TB | lineage4 | None | ERR736856 | HR-TB | lineage4 | None | ERR736872 | Sensitive | lineage4 | None | ERR736834 | Sensitive | lineage4 | None | ERR736848 | HR-TB | None | ERR751326 | Sensitive | lineage4 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR9634265 | Sensitive | None | SRR1013599 | HR-TB | None | ERR9787153 | Other | lineage6.1.3 | None | ERR9787256 | Other | lineage6.1.3 | None | ERR9787336 | Other | lineage6 | None | SRR1049582 | MDR-TB | lineage4.6.1.2 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR10808805 | Sensitive | None | SRR1158918 | Sensitive | lineage4 | None | SRR10809074 | Sensitive | lineage4 | None | SRR1175473 | Other | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1173777 | Other | lineage4 | None | SRR1173568 | Other | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1175491 | MDR-TB | lineage4 | None | SRR1175472 | MDR-TB | lineage4 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR11972425 | Pre-XDR-TB | lineage2.2.1 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR14801749 | Sensitive | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR16157123 | Other | lineage4.9 | None | SRR1791747 | Other | La1.8.1 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR18909918 | Other | lineage2.2.1.1 | None | SRR19295647 | Sensitive | lineage4.9 | None | ERR4815310 | Other | None | SRR20969475 | Other | lineage1.2.1.2 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR3675472 | Sensitive | lineage4.9 | None | ERR176778 | HR-TB | None | ERR176779 | HR-TB | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | ERR4814734 | Other | lineage1.2.1.1 | None | ERR4815471 | Other | lineage4.9 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | ERR702405 | Sensitive | lineage2.1 | None | SRR3675246 | Sensitive | lineage4 | None | ERR1750916 | Other | lineage2.2.1.1 | None | ERR181824 | HR-TB | lineage4 | None | ERR4815550 | Other | lineage4 | None | SRR3675283 | Sensitive | lineage4.9 | None | ERR212123 | Other | None | ERR176651 | HR-TB | None | ERR4816964 | Other | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | ERR4816322 | Other | lineage4.9 | None | ERR181887 | HR-TB | None | SRR3675542 | Other | lineage4.9 | None | ERR212125 | HR-TB | lineage4 | None | ERR4817204 | RR-TB | lineage4.9 | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR4816702 | RR-TB | lineage4.6.2.2 | None | ERR4816852 | Other | lineage4.9 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR4818710 | Sensitive | lineage4.9 | None | ERR2513121 | Sensitive | lineage3.1.3 | None | SRR5341461 | Sensitive | lineage4 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | SRR5341366 | Sensitive | lineage4 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SRR5341425 | Other | lineage4 | None | ERR4819357 | Other | lineage4.9 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5341387 | Other | lineage4 | None | SRR5341396 | Other | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | ERR2514552 | Sensitive | lineage3 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | SRR5341455 | Sensitive | lineage4 | None | ERR4821214 | RR-TB | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | SRR5341303 | RR-TB | lineage4 | None | ERR4819933 | Other | lineage4.9 | None | SRR5341456 | Other | None | SRR5341300 | Other | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341310 | Other | lineage1.1.2 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341467 | Other | lineage4 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341469 | Other | lineage4 | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | ERR4821655 | Sensitive | lineage4 | None | SRR6511621 | HR-TB | None | SRR6045892 | Sensitive | None | SRR6045158 | Other | lineage4.9 | None | SRR6046299 | HR-TB | None | SRR6045664 | Other | lineage4.2.1 | None | SRR6046141 | Other | lineage4.9 | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6045832 | HR-TB | lineage4.9 | None | ERR11466072 | Sensitive | lineage4.3.4.2.1 | None | ERR323037 | HR-TB | lineage4 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR4831529 | Pre-XDR-TB | lineage2.2.1 | None | ERR4831618 | MDR-TB | lineage2.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR502510 | Sensitive | lineage4 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR4831638 | Sensitive | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR11465510 | Sensitive | lineage4.3.4.2.1 | None | SRR6981961 | Sensitive | lineage2.2.1 | None | ERR11465152 | Sensitive | lineage4.3.4.1 | None | ERR502943 | HR-TB | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9613550 | HR-TB | lineage4.1.2.1 | None | SRR7645928 | RR-TB | lineage4.7 | None | SRR7535082 | Sensitive | lineage4 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR9971113 | Other | lineage2.2.1 | None | SRR9971112 | Other | lineage2.2.1 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR1035122 | Sensitive | None | ERR323045 | HR-TB | None | ERR323107 | Other | lineage4 | None | ERR323066 | Sensitive | lineage4 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323085 | Sensitive | lineage4 | None | ERR323108 | HR-TB | lineage4 | None | ERR036207 | Other | lineage4.9 | None | ERR1063858 | HR-TB | None | ERR1063862 | HR-TB | None | ERR1063883 | Sensitive | lineage4 | None | ERR1063859 | HR-TB | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR1063896 | Sensitive | None | ERR137286 | Sensitive | lineage4 | None | ERR11465628 | Sensitive | lineage4.3.4.2.1 | None | ERR323115 | Sensitive | lineage4 | None |
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