Rv0006 - c.1362C>T


Drug resistance types
39 Sensitive 1 RR-TB 13 HR-TB 5 MDR-TB 0 Pre-XDR-TB 0 XDR-TB 8 Other
lineage Counts
lineage Count
lineage3 1
lineage4.3.4.2 25
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
lineage4.1.2 1
lineage4.9 20
lineage2.2.1 1
M.canetti;lineage1 1
lineage4 2
La1.7;lineage4.9 3
lineage1.1.3.1 1
La1;lineage4.1.2 1
lineage4.5 1
M.canetti;lineage4.2;lineage4.9 1
lineage2.2 1
lineage4.3.2.1 1
La1.7;lineage4.9;lineage6 1
M.canetti;lineage4.9;lineage9 1
1
lineage4.2;lineage4.9 1
spoligotype Counts
spoligotype Count
None 66
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR28351347 Other lineage3 None
ERR10219876 Other lineage4.3.4.2 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR1193772 Sensitive lineage4.3.4.2 pt
SRR9970980 HR-TB lineage4.1.2 None
ERR4798099 Other lineage4.9 None
ERR736856 Sensitive lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
SRR3675235 Sensitive lineage4.9 None
ERR3957941 Sensitive lineage4.3.4.2 None
ERR11641185 Sensitive lineage4.3.4.2 None
SRR10315567 HR-TB lineage2.2.1 None
SRR15014655 Other M.canetti;lineage1 None
ERR3273109 HR-TB lineage4 None
ERR10219863 Sensitive lineage4.3.4.2 None
ERR275193 Sensitive lineage4.3.4.2 pt
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR3283021 HR-TB lineage4.9 None
ERR7764402 Sensitive lineage4.3.4.2 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR3957940 Sensitive lineage4.3.4.2 None
SRR3675246 Other lineage4.9 None
SRR9970978 Sensitive La1;lineage4.1.2 None
SRR5341469 HR-TB lineage4.9 None
ERR3957943 Sensitive lineage4.3.4.2 None
ERR12745254 Sensitive lineage4.3.4.2 None
SRR28859763 Sensitive lineage4.5 None
ERR323062 Sensitive lineage4.9 None
SRR13591353 Sensitive lineage4.3.4.2 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
ERR4810624 MDR-TB lineage2.2 None
ERR6358979 Other lineage4.9 None
ERR323115 Sensitive lineage4.9 None
ERR3957949 Sensitive lineage4.3.4.2 None
ERR1063883 HR-TB lineage4.9 None
ERR3957950 Sensitive lineage4.3.4.2 None
ERR4797184 Sensitive lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
ERR3957934 Sensitive lineage4.3.4.2 None
SRR12416842 HR-TB lineage4.9 None
ERR736834 Sensitive lineage4.9 None
SRR6045892 Sensitive lineage4.9 None
ERR4797264 Sensitive lineage4.9 None
SRR28351339 MDR-TB lineage4 None
ERR3957942 Sensitive lineage4.3.4.2 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR3957947 Sensitive lineage4.3.4.2 None
ERR10219862 Sensitive lineage4.3.4.2 None
ERR3957929 Sensitive lineage4.3.4.2 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR1063896 Sensitive None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR3957921 Sensitive lineage4.3.4.2 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR1035209 Sensitive lineage4.3.4.2 pt
ERR216938 HR-TB La1.7;lineage4.9 None
SRR6511621 Sensitive lineage4.9 None
SRR13591366 Sensitive lineage4.3.4.2 None
SRR5341453 Other lineage4.9 None
ERR3957946 Sensitive lineage4.3.4.2 None
ERR3797047 MDR-TB lineage4.9 None
SRR3675585 Sensitive lineage4.9 None
ERR7764331 Sensitive lineage4.3.4.2 None
ERR11641183 Sensitive lineage4.3.4.2 None
ERR3957926 Sensitive lineage4.3.4.2 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None