Rv0006 - c.1362C>T

Note: the variant has been searched for in a non-representative convenience dataset of samples from the ENA. This sampleset may contain overrepresentation in certain categories such as geographic source, drug resistance type and lineage. Interpretation of variant frequencies should be performed cautiously with this in mind.
Drug resistance types
40 Sensitive 1 RR-TB 12 HR-TB 4 MDR-TB 0 Pre-XDR-TB 0 XDR-TB 10 Other
lineage Counts
lineage Count
lineage4.3.4.2 24
lineage4.9 21
lineage2.2.1 2
lineage4 2
lineage1.1.3.1 1
lineage4.1.2 2
lineage4.8 1
lineage3 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
La1.7;lineage4.9 3
M.canetti;lineage1 1
lineage4.3.2.1 1
lineage4.5 1
lineage4.2;lineage4.9 1
La1.7;lineage4.9;lineage6 1
M.canetti;lineage4.2;lineage4.9 1
M.canetti;lineage4.9;lineage9 1
1
spoligotype Counts
spoligotype Count
None 67
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR3957949 Sensitive lineage4.3.4.2 None
ERR10219876 Other lineage4.3.4.2 None
ERR1063883 HR-TB lineage4.9 None
ERR3957941 Sensitive lineage4.3.4.2 None
ERR4797184 Sensitive lineage4.9 None
ERR11641185 Sensitive lineage4.3.4.2 None
SRR10315567 Other lineage2.2.1 None
SRR6511621 Sensitive lineage4.9 None
ERR3273109 HR-TB lineage4 None
ERR10219863 Sensitive lineage4.3.4.2 None
ERR3283021 HR-TB lineage4.9 None
ERR3957934 Sensitive lineage4.3.4.2 None
SRR12416842 HR-TB lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
SRR9970978 Sensitive lineage4.1.2 None
SRR9970979 Sensitive lineage4.8 None
ERR275193 Sensitive lineage4.3.4.2 pt
ERR736834 Sensitive lineage4.9 None
SRR6045892 Sensitive lineage4.9 None
SRR5341469 HR-TB lineage4.9 None
ERR3957943 Sensitive lineage4.3.4.2 None
ERR4797264 Sensitive lineage4.9 None
ERR12745254 Sensitive lineage4.3.4.2 None
ERR1193772 Sensitive lineage4.3.4.2 pt
ERR323062 Sensitive lineage4.9 None
ERR3957947 Sensitive lineage4.3.4.2 None
ERR3957929 Sensitive lineage4.3.4.2 None
SRR28351347 Other lineage3 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR3957921 Sensitive lineage4.3.4.2 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR323115 Sensitive lineage4.9 None
ERR4798099 Other lineage4.9 None
ERR736856 Sensitive lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
SRR3675235 Sensitive lineage4.9 None
ERR4810624 HR-TB lineage2.2.1 None
ERR3957950 Sensitive lineage4.3.4.2 None
ERR216938 HR-TB La1.7;lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
ERR1023525 HR-TB La1.7;lineage4.9 None
SRR13591366 Sensitive lineage4.3.4.2 None
ERR4799378 Sensitive lineage4.9 None
SRR5341453 Other lineage4.9 None
ERR3957946 Sensitive lineage4.3.4.2 None
ERR7764402 Sensitive lineage4.3.4.2 None
ERR3957940 Sensitive lineage4.3.4.2 None
ERR3797047 MDR-TB lineage4.9 None
SRR3675246 Other lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR9970980 Other lineage4.1.2 None
SRR3675585 Sensitive lineage4.9 None
SRR28351339 MDR-TB lineage4 None
ERR7764331 Sensitive lineage4.3.4.2 None
ERR11641183 Sensitive lineage4.3.4.2 None
SRR28859763 Sensitive lineage4.5 None
ERR3957926 Sensitive lineage4.3.4.2 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
SRR13591353 Sensitive lineage4.3.4.2 None
ERR3957942 Sensitive lineage4.3.4.2 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
ERR10219862 Sensitive lineage4.3.4.2 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR1063896 Sensitive None
ERR6358979 Other lineage4.9 None