lineage | Count |
---|---|
La1.7.1 | 1 |
lineage4 | 1 |
lineage4.3.1;lineage4.9;lineage6 | 1 |
lineage2.2 | 3 |
La3;lineage4.9 | 6 |
lineage2.2.1 | 4 |
lineage4.8 | 1 |
lineage4.8.1 | 1 |
lineage4.9 | 33 |
lineage4.1.2.1 | 2 |
lineage4.9;lineage7 | 1 |
La1.7;lineage3;lineage4.9;lineage7 | 1 |
lineage4.9;lineage6.1.3 | 1 |
La1.7;lineage4.9;lineage6 | 1 |
La1.7;lineage4.9;lineage7 | 2 |
La2;lineage4.9 | 1 |
La1.2;La1.8.1 | 1 |
lineage4.5 | 1 |
La1.7;lineage4.9 | 3 |
lineage2.2.1.2;lineage7 | 1 |
spoligotype | Count |
---|---|
None | 66 |
ID | Drug resistance | Lineage | Country iso2 | SRR1792478 | HR-TB | La1.7.1 | None | SRR6045053 | Other | lineage4 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR20969708 | HR-TB | lineage2.2 | None | ERR3797048 | Other | La3;lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR4799025 | Other | lineage4.8 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | SRR5341330 | Other | lineage4.9 | None | SRR6046593 | Other | lineage4.9 | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | ERR4769450 | Other | lineage4.9 | None | ERR3283011 | Other | La3;lineage4.9 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR2041726 | MDR-TB | lineage4.1.2.1 | None | SRR14782405 | HR-TB | lineage4.9 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | ERR2041725 | MDR-TB | lineage4.1.2.1 | None | SRR11662690 | HR-TB | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | SRR20970016 | Other | lineage2.2 | None | ERR3283055 | HR-TB | lineage4.9 | None | ERR3445504 | Other | lineage4.9;lineage6.1.3 | None | ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | ERR4769439 | HR-TB | lineage4.9 | None | SRR5341313 | Sensitive | La1.7;lineage4.9;lineage7 | None | SRR5535933 | Other | lineage4.9 | None | SRR6045548 | Sensitive | lineage4.9 | None | SRR6046492 | Other | lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | SRR29096879 | Sensitive | lineage4.9 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | SRR14801749 | HR-TB | lineage4.9 | None | ERR4816548 | HR-TB | lineage4.5 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | SRR10808399 | Sensitive | lineage4.9 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR4769452 | Other | lineage4.9 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | SRR5341456 | Other | lineage4.9 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR6046046 | Other | lineage4.9 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | ERR6359066 | HR-TB | lineage4.9 | None | ERR3283031 | Sensitive | La3;lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | ERR1063855 | Other | lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR3283021 | HR-TB | lineage4.9 | None | ERR3797047 | MDR-TB | lineage4.9 | None | ERR3797046 | HR-TB | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | SRR11972367 | Sensitive | lineage2.2.1 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | ERR6359082 | Other | lineage4.9 | None | SRR29096178 | Sensitive | lineage4.9 | None | SRR6046878 | Other | lineage4.9 | None | SRR6045217 | Sensitive | lineage4.9 | None | ERR2693252 | Sensitive | lineage4.9 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | SRR3675270 | Other | lineage4.9 | None | SRR29096784 | Sensitive | lineage4.9 | None |
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