Rv0682 - c.357T>G
Drug resistance types
63 Sensitive
5 RR-TB
41 HR-TB
5 MDR-TB
4 Pre-XDR-TB
0 XDR-TB
41 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.7;lineage4.9 | 8 |
| lineage2.2.1;lineage4 | 1 |
| lineage4.9 | 82 |
| lineage2.2.1 | 10 |
| La3;lineage4.9 | 8 |
| lineage4.1.2.1 | 1 |
| La1.2.BCG;lineage4.9 | 1 |
| La1.7.1;lineage4.9 | 1 |
| lineage3 | 2 |
| La1.7.1;La1.7.X-unk4;lineage7 | 1 |
| lineage4.1.1.1 | 1 |
| La1.6;lineage4 | 1 |
| lineage4.3.4 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.6.5 | 2 |
| lineage2.2.1;lineage4.9 | 2 |
| La1.7 | 2 |
| lineage4.3.2.1 | 2 |
| lineage1;lineage4.9 | 1 |
| lineage4.8 | 2 |
| La1.8.1 | 3 |
| lineage4.9;lineage7 | 2 |
| lineage1.2.1.2.1 | 1 |
| lineage2.1 | 1 |
| La1.2.BCG | 2 |
| La1.7;M.canetti;lineage4.9 | 2 |
| lineage4 | 2 |
| lineage2.2.1.2;lineage7 | 1 |
| lineage4.5 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage2;lineage4.9 | 1 |
| La1.7.1 | 1 |
| La3;M.canetti;lineage4.9 | 1 |
| La1.2 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.8.1 | 1 |
| 1 | |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage2.2.1;lineage4.5 | 1 |
| lineage2;lineage4 | 1 |
| La1;lineage4.9 | 1 |
| lineage1.1.1 | 1 |
| La3;lineage4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 159 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675492 | Other | La1.7;lineage4.9 | None | SRR1181237 | Sensitive | lineage2.2.1;lineage4 | None | ERR926162 | Sensitive | lineage4.9 | None | ERR736848 | Other | lineage4.9 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | ERR323107 | Sensitive | lineage4.9 | None | ERR067712 | Sensitive | lineage4.9 | None | SRR6046492 | Other | lineage4.9 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | ERR926160 | Sensitive | lineage4.9 | None | ERR3283031 | Sensitive | La3;lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR26399490 | Sensitive | lineage4.9 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | ERR3283047 | Sensitive | La3;lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR1063846 | HR-TB | lineage4.9 | None | SRR12708392 | Other | lineage2.2.1 | None | ERR4814639 | HR-TB | lineage4.9 | None | SRR1915481 | Other | La1.2.BCG;lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | ERR4596902 | MDR-TB | lineage3 | None | ERR971389 | Sensitive | lineage4.9 | None | ERR4819546 | HR-TB | lineage3 | None | ERR3445501 | HR-TB | La1.7.1;La1.7.X-unk4;lineage7 | None | ERR3797046 | HR-TB | lineage4.9 | None | SRR8758877 | MDR-TB | lineage4.1.1.1 | None | ERR5311094 | HR-TB | lineage4.9 | None | ERR3283055 | HR-TB | lineage4.9 | None | ERR926156 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR28351554 | Sensitive | La1.6;lineage4 | None | SRR1180410 | Sensitive | lineage4.9 | None | ERR1063858 | HR-TB | lineage4.9 | None | ERR926155 | Sensitive | lineage4.9 | None | ERR4808964 | RR-TB | lineage2.2.1 | None | SRR6044875 | Sensitive | lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | ERR7801175 | HR-TB | lineage4.6.5 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | SRR1184114 | Sensitive | lineage2.2.1;lineage4.9 | None | SRR1184021 | Sensitive | lineage4.9 | None | ERR4830353 | Other | La1.7 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR3283014 | Sensitive | La3;lineage4.9 | None | SRR10315751 | MDR-TB | lineage4.8 | None | ERR3797019 | Other | La1.8.1 | None | ERR926161 | Sensitive | lineage4.9 | None | ERR926163 | Other | lineage4.9 | None | ERR926154 | Sensitive | lineage4.9 | None | SRR21677886 | Sensitive | lineage4.9 | None | ERR4831117 | HR-TB | lineage4.9;lineage7 | None | ERR1034634 | HR-TB | lineage4.9 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | ERR4817765 | Other | lineage1.2.1.2.1 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR22251329 | Other | lineage2.1 | None | ERR3283057 | Sensitive | La3;lineage4.9 | None | SRR1915487 | Other | La1.2.BCG | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | SRR11462861 | Other | La1.8.1 | None | SRR6045795 | Sensitive | lineage2.2.1 | None | ERR4817915 | Other | lineage4.9 | None | SRR3675505 | Other | La1.7;M.canetti;lineage4.9 | None | ERR4798823 | HR-TB | lineage4 | None | ERR926157 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR18549032 | HR-TB | lineage2.2.1.2;lineage7 | None | ERR752229 | Other | lineage4.5 | None | ERR3283040 | HR-TB | lineage4.9 | None | SRR3675222 | Other | La1.7 | None | SRR1180406 | Sensitive | lineage4.9 | None | ERR3797029 | Other | lineage4.9 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | SRR1181215 | Sensitive | lineage4.4.1.1.1 | None | ERR3797080 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR3619764 | Pre-XDR-TB | lineage2.2.1 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180946 | Sensitive | lineage2;lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None | ERR3797048 | Other | La3;lineage4.9 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR7801176 | RR-TB | lineage4.6.5 | None | ERR4769427 | Other | La1.2 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | SRR3601585 | Pre-XDR-TB | lineage2.2.1 | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR181887 | Other | lineage4.9 | None | ERR4818561 | Sensitive | lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | SRR8692887 | Other | None | ERR3797063 | Sensitive | La3;lineage4.9 | None | ERR926158 | Sensitive | lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR3283011 | Other | La3;lineage4.9 | None | ERR4811035 | Pre-XDR-TB | lineage2.2.1;lineage4.5 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | ERR176779 | HR-TB | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | ERR926159 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | ERR108471 | HR-TB | lineage4.9 | None | SRR1181349 | Sensitive | lineage4 | None | ERR3797073 | Other | La1.8.1 | None | ERR3797064 | Other | La3;lineage4.9 | None | ERR926164 | Other | lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR473332 | Other | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | ERR3797065 | RR-TB | lineage4.9 | None | SRR6044835 | Other | lineage4.9 | None | SRR1915485 | Other | La1.2.BCG | None | ERR212125 | HR-TB | lineage4.9 | None | ERR1023502 | MDR-TB | lineage2;lineage4 | None | SRR1181390 | Sensitive | lineage2.2.1;lineage4.9 | None | ERR4815815 | Sensitive | lineage4.9 | None | ERR4811493 | HR-TB | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | ERR181824 | HR-TB | lineage4.9 | None | ERR3797079 | Sensitive | lineage4.9 | None | ERR4769497 | Other | La1;lineage4.9 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR3797087 | Sensitive | lineage4.9 | None | ERR3445502 | Sensitive | lineage4.9;lineage7 | None | ERR736875 | HR-TB | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | ERR926165 | Sensitive | lineage4.9 | None | ERR4769530 | RR-TB | lineage4.9 | None | SRR1175513 | Sensitive | lineage4.9 | None | ERR4819314 | Other | lineage1.1.1 | None | SRR1180250 | Other | lineage4.9 | None | ERR4816762 | Sensitive | lineage4.9 | None | ERR176651 | Other | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR3675385 | Other | La1.7;lineage4.9 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | ERR3283028 | Other | La3;lineage4 | None | SRR3675501 | Other | La1.7;lineage4.9 | None | ERR4188247 | HR-TB | lineage4.9 | None |
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