Rv0668 - c.1179G>A
Drug resistance types
79 Sensitive
22 RR-TB
75 HR-TB
25 MDR-TB
15 Pre-XDR-TB
0 XDR-TB
77 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.8 | 7 |
| 64 | |
| lineage4.3.4.1;La1.7 | 1 |
| lineage4 | 58 |
| La1.8.1 | 3 |
| lineage4.9 | 42 |
| lineage3 | 12 |
| lineage5.1.2 | 1 |
| lineage4.1.2.1 | 8 |
| La1.2 | 2 |
| lineage4.9;La1.3 | 1 |
| La1.3 | 3 |
| lineage3.1.2.1 | 2 |
| lineage4.5;lineage2.2.1 | 1 |
| lineage2.2.1 | 26 |
| lineage1.2.1.2 | 1 |
| lineage4.3.4 | 1 |
| lineage1.1.1.1 | 2 |
| lineage4.6.2.2 | 3 |
| lineage4.5 | 1 |
| lineage4.8;lineage4.1 | 2 |
| lineage4.3.4.2.1 | 6 |
| lineage4.4.1.1;lineage4.1.2.1 | 1 |
| lineage4.3.2.1 | 4 |
| La1.6 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage4.3.3 | 5 |
| lineage2.2.1.1 | 4 |
| lineage2.2 | 1 |
| lineage3.1 | 2 |
| lineage2 | 2 |
| La2 | 1 |
| lineage2.1 | 2 |
| La1.7.1 | 1 |
| lineage1.1.1 | 2 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage3.1.3 | 1 |
| lineage6.3;lineage2.2.1 | 1 |
| lineage4.1.1 | 1 |
| lineage4.1.3;lineage4.1.2.1;lineage1.1.2 | 1 |
| lineage4;lineage2 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.1 | 1 |
| lineage1.1.3.1 | 1 |
| lineage4.2.1 | 1 |
| lineage1.1.2 | 1 |
| lineage4.1.2.1.1 | 1 |
| lineage4.7 | 1 |
| lineage4.1.1.3 | 3 |
| lineage4.6.1.1 | 1 |
| lineage4.3.4.2.1;lineage4.1.2.1 | 1 |
| lineage4.3.4.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 293 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR12015084 | Other | lineage4.8 | None | ERR3283025 | HR-TB | None | ERR11465802 | Other | lineage4.3.4.1;La1.7 | None | ERR3283055 | HR-TB | None | ERR3445503 | HR-TB | None | ERR3445504 | HR-TB | None | ERR349265 | Sensitive | lineage4 | None | ERR3468488 | RR-TB | La1.8.1 | None | ERR349264 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349298 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363421 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR363506 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369158 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369163 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR400529 | Other | lineage3 | None | ERR400345 | Other | lineage4 | None | ERR3797046 | HR-TB | None | ERR3797086 | Other | lineage4.9 | None | ERR400538 | RR-TB | lineage5.1.2 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769419 | Other | lineage4.9 | None | ERR4769418 | Other | La1.2 | None | ERR4769433 | Pre-XDR-TB | lineage4.9 | None | ERR4769472 | Other | lineage4.9 | None | ERR4188213 | HR-TB | La1.8.1 | None | ERR4596902 | HR-TB | lineage3 | None | ERR4769550 | Other | lineage4.9;La1.3 | None | ERR4769506 | Sensitive | La1.3 | None | ERR4769554 | RR-TB | lineage4.9 | None | ERR4769552 | Other | La1.3 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4769555 | Other | La1.3 | None | ERR4798431 | HR-TB | None | ERR4811105 | HR-TB | None | ERR4798898 | MDR-TB | lineage3.1.2.1 | None | ERR4810741 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4811035 | Pre-XDR-TB | lineage4.5;lineage2.2.1 | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4811493 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR5865993 | MDR-TB | lineage2.2.1 | None | ERR6336804 | HR-TB | lineage1.2.1.2 | None | ERR6865502 | Sensitive | lineage4 | None | ERR736875 | HR-TB | lineage4 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR6866547 | Sensitive | lineage4 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR752012 | HR-TB | lineage1.1.1.1 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR752229 | Other | lineage4.5 | None | ERR9119669 | HR-TB | None | ERR9786526 | Other | lineage4.8;lineage4.1 | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR9786528 | Sensitive | lineage4.6.2.2 | None | ERR990545 | Other | lineage3 | None | ERR9786843 | Other | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049560 | MDR-TB | lineage4.3.4.2.1 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR1049672 | Other | lineage3 | None | SRR1049726 | MDR-TB | lineage4.4.1.1;lineage4.1.2.1 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1062871 | MDR-TB | lineage4.3.4.2.1 | None | SRR1062918 | Pre-XDR-TB | lineage3 | None | SRR1062928 | RR-TB | lineage4 | None | SRR11349147 | RR-TB | lineage4.3.2.1 | None | SRR10993951 | RR-TB | La1.6 | None | SRR1172951 | Other | None | SRR11349145 | Pre-XDR-TB | lineage4.4.1.1.1 | None | SRR1140736 | RR-TB | None | SRR1172728 | MDR-TB | None | SRR1172817 | HR-TB | None | SRR1140716 | Pre-XDR-TB | lineage3 | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR1172857 | MDR-TB | None | SRR1173170 | Other | lineage4.9 | None | SRR1173153 | HR-TB | None | SRR1173166 | Other | lineage4.9 | None | SRR1173118 | Other | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173484 | Other | lineage4 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1173400 | Other | None | SRR1173363 | HR-TB | None | SRR1173384 | Other | lineage4 | None | SRR1173740 | Other | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173629 | Other | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173706 | Other | lineage4.9 | None | SRR1173778 | Other | None | SRR1173770 | Other | lineage4.9 | None | SRR1173788 | Other | None | SRR1175049 | RR-TB | None | SRR1175074 | MDR-TB | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1183049 | Other | lineage2.2 | None | SRR1181328 | Other | lineage2.2.1 | None | SRR1180270 | Other | lineage2.2.1 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1183145 | Other | lineage2.2.1 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184294 | HR-TB | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR1196546 | HR-TB | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184381 | MDR-TB | None | SRR1184388 | Other | None | SRR1184372 | MDR-TB | None | SRR1184380 | HR-TB | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1196494 | MDR-TB | None | SRR1196677 | HR-TB | lineage2 | None | SRR1196566 | HR-TB | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR12142341 | HR-TB | None | SRR1196768 | MDR-TB | None | SRR11972367 | Sensitive | lineage2.2.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR13888750 | Other | La2 | None | SRR20969677 | HR-TB | lineage2 | None | SRR15368973 | Other | None | SRR1710057 | Other | lineage2.1 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR18003019 | Other | lineage2.2.1 | None | SRR19304036 | HR-TB | None | SRR20632814 | Sensitive | lineage4 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR5709926 | MDR-TB | lineage2.2.1 | None | SRR20969857 | MDR-TB | lineage2.2.1 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR22249687 | Sensitive | lineage4.8 | None | SRR21732980 | Other | lineage4.3.3 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR176779 | HR-TB | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | ERR176778 | HR-TB | None | SRR3675488 | HR-TB | None | SAMN02585910 | Other | lineage2.2.1 | None | SRR3675222 | Other | None | SRR3416776 | Other | lineage2.1 | None | SRR3675209 | Sensitive | lineage4.9 | None | ERR4814639 | HR-TB | lineage4 | None | SRR3675501 | HR-TB | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | ERR181824 | HR-TB | lineage4 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4813263 | MDR-TB | lineage4.8 | None | SRR3675292 | Sensitive | lineage4 | None | SRR3675387 | Sensitive | None | SRR3675510 | Other | None | SRR3675527 | RR-TB | lineage4.9 | None | ERR4816113 | Sensitive | lineage4.1.1 | None | ERR4816470 | Other | lineage3 | None | SRR3675265 | Other | lineage4 | None | ERR176651 | HR-TB | None | ERR181887 | HR-TB | None | ERR4815022 | Other | lineage3.1.2.1 | None | SRR3675540 | Sensitive | lineage4.9 | None | ERR4816100 | Sensitive | lineage4.1.3;lineage4.1.2.1;lineage1.1.2 | None | ERR212125 | HR-TB | lineage4 | None | ERR212138 | HR-TB | lineage4 | None | ERR4816466 | HR-TB | None | SRR3742665 | HR-TB | None | ERR4816729 | Sensitive | lineage4.9 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR4815815 | Sensitive | lineage4 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2 | None | ERR2513438 | Sensitive | lineage4.1.2.1 | None | ERR4818811 | Pre-XDR-TB | lineage2.2.1 | None | ERR2446566 | Other | lineage4.1 | None | ERR2513259 | Other | lineage3 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR3275709 | HR-TB | lineage3 | nl | ERR4818561 | HR-TB | lineage4 | None | ERR2512849 | RR-TB | lineage1.1.3.1 | None | ERR4819305 | RR-TB | lineage4.9 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | ERR4819546 | HR-TB | lineage3 | None | ERR4819314 | Other | lineage1.1.1 | None | SRR5341456 | Other | None | ERR4819383 | RR-TB | lineage4.9 | None | ERR4820503 | Other | lineage2.2.1 | None | ERR4819863 | RR-TB | lineage4.9 | None | ERR2693238 | HR-TB | lineage4.9 | None | ERR4820030 | Other | lineage4.9 | None | SRR5341330 | HR-TB | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6045503 | HR-TB | None | SRR6046141 | Other | lineage4.9 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | SRR6045191 | Sensitive | lineage4.9 | None | ERR4821143 | RR-TB | lineage4.9 | None | ERR2660498 | Sensitive | lineage4.3.4.2.1 | None | ERR4821272 | RR-TB | lineage4.1.2.1 | None | SRR6045706 | Sensitive | lineage4 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6046253 | HR-TB | lineage4.9 | None | ERR4828292 | Sensitive | lineage1.1.1.1 | None | SRR6046299 | HR-TB | None | ERR2851356 | Sensitive | lineage4.9 | None | ERR4830353 | Other | None | SRR6046897 | Sensitive | lineage4 | None | SRR6046492 | Other | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046863 | Sensitive | lineage1.1.2 | None | SRR6046802 | Other | lineage4 | None | ERR323037 | HR-TB | lineage4 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR6397389 | Sensitive | lineage4.1.2.1 | None | ERR502473 | Pre-XDR-TB | lineage4.9 | None | ERR4831117 | HR-TB | None | ERR502474 | Pre-XDR-TB | lineage4.9 | None | ERR4972483 | Pre-XDR-TB | lineage4.1.2.1.1 | None | ERR502478 | RR-TB | lineage4.9 | None | ERR502481 | Pre-XDR-TB | lineage4.9 | None | ERR4831529 | Pre-XDR-TB | lineage2.2.1 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR502479 | RR-TB | lineage4.9 | None | ERR11466174 | Other | lineage4.8 | None | ERR4817628 | Sensitive | lineage4.8 | gb | ERR502908 | HR-TB | lineage2.2.1 | None | SRR7496471 | Sensitive | None | ERR5311077 | RR-TB | La1.8.1 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR7496523 | Other | lineage4.7 | None | SRR9971333 | MDR-TB | lineage4.1.1.3 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | SRR9971114 | Other | lineage2.2.1 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | ERR323108 | HR-TB | lineage4 | None | ERR323045 | HR-TB | None | SRR9971122 | MDR-TB | lineage4.8 | None | SRR9971168 | Other | lineage4.3.2.1 | None | ERR11465234 | Sensitive | lineage4.3.4.2.1;lineage4.1.2.1 | None | ERR11465025 | Other | lineage4.1.1.3 | None | ERR11465232 | Sensitive | lineage4.1.2.1 | None | ERR11465024 | Other | lineage4.1.1.3 | None | ERR067712 | HR-TB | lineage4 | None | ERR1023525 | HR-TB | lineage4 | None | ERR11465279 | Sensitive | lineage4.3.4.1 | None | ERR1034634 | HR-TB | None | ERR1063855 | Other | lineage4 | None | ERR1063862 | HR-TB | None | ERR1063858 | HR-TB | None | ERR1063859 | HR-TB | None |
|---|
