Rv0006 - c.-212C>T


Drug resistance types
65 Sensitive 2 RR-TB 34 HR-TB 21 MDR-TB 2 Pre-XDR-TB 2 XDR-TB 108 Other
lineage Counts
lineage Count
lineage4.9 80
lineage4.6.2.2 3
14
lineage4 4
lineage2.2.1 12
M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 1
La3;lineage4.9 2
La2;lineage4.9;lineage9 1
lineage1.2.2.2 1
lineage4.1.2.1 11
lineage3 3
La3;M.canetti;lineage2;lineage4.2;lineage4.3 1
lineage4.1.3 2
lineage2.1;lineage4.9 11
La3;lineage2.1;lineage4.9;lineage6.3 4
lineage1.1.1;lineage4 1
M.canetti;lineage2.2 2
lineage4.3.2;lineage4.9 1
lineage4.1;lineage4.8 1
lineage4.1.1.3;lineage4.9 2
lineage1.2.1.2 1
lineage4.9;lineage6.3 7
M.canetti;lineage4.6.4;lineage4.9 1
lineage1;lineage4.9 1
lineage4.8 1
lineage4.1;lineage4.9 1
lineage4.5 1
lineage4.6.1.1 1
lineage3.1.2.1;lineage3.1.2.2 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
lineage6.3.1 1
lineage4.3.3 1
lineage2.1;lineage4.9;lineage6.3 10
lineage4.9;lineage9 2
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
La1.7;lineage4.9 2
lineage4.2;lineage4.6.3;lineage4.9.1 2
lineage2.1;lineage6.3 2
lineage4.3.2.1 2
lineage2.1 2
M.canetti;lineage2.1;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 1
lineage5.1.4 1
lineage4.2;lineage4.6.3;lineage4.9 1
La3;lineage2.1;lineage6.3 1
lineage4.1.1.1 1
La3;M.canetti;lineage2.2.1 1
lineage4.3.4.2.1 1
La1.6;La3;M.canetti;lineage4.2.2 1
La1.6;La3;M.canetti;lineage4.2;lineage4.9 1
lineage2.2.1;lineage4 1
lineage4.7 1
M.canetti;lineage4.2;lineage4.9 1
La2;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage3.1.2.2 1
La3;lineage2.2.1 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 2
La1;lineage4.1.2 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
lineage2.2 2
M.canetti;lineage4.2 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 1
lineage6.1.3 1
La1.2.BCG;La1.8.1 1
lineage4.2.1.1;lineage4.3.3 1
La3;lineage2 1
M.canetti;lineage2.1;lineage4.9 1
La3;lineage1.1.2 1
spoligotype Counts
spoligotype Count
None 234
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR363437 Sensitive lineage4.9 None
ERR349265 Other lineage4.9 None
ERR373945 Sensitive lineage4.9 None
ERR9119525 MDR-TB lineage4.6.2.2 None
SRR6789626 Other None
ERR4178226 Sensitive lineage4 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR124636 Sensitive lineage4.9 None
ERR349299 Other lineage4.9 None
SRR6046245 Other lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
ERR1035162 Other M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR400336 Sensitive lineage4.9 None
SRR6045371 Other lineage4.9 None
ERR4798406 MDR-TB La1.6;La3;M.canetti;lineage3;lineage4.2;lineage4.3.4;lineage4.9;lineage6.3 None
SRR29017461 Other La3;lineage4.9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR4797201 Other lineage1.2.2.2 None
ERR349298 Sensitive lineage4.9 None
ERR4816904 Sensitive lineage4.1.2.1 None
ERR4800341 Other lineage3 None
ERR363445 Other lineage4.9 None
ERR158583 MDR-TB La3;M.canetti;lineage2;lineage4.2;lineage4.3 None
ERR9786611 HR-TB lineage4.1.3 None
SRR7496509 Other None
ERR323043 Other lineage2.1;lineage4.9 None
SRR1183111 HR-TB lineage4.9 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR176740 Other lineage4.9 None
SRR3675311 Other lineage4.9 None
SRR1183145 Other lineage2.2.1 None
ERR4831638 Sensitive lineage1.1.1;lineage4 None
SRR1180270 Other lineage2.2.1 None
ERR349296 Sensitive lineage4.9 None
ERR9786843 Other None
SRR3675221 Other lineage4.9 None
ERR369159 Sensitive lineage4.9 None
ERR4797313 Sensitive lineage2.2.1 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
SRR1180226 HR-TB lineage4.9 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
ERR9786525 Other lineage4.1;lineage4.8 None
SRR1175500 Sensitive lineage4.1.1.3;lineage4.9 None
SRR12006550 Sensitive lineage1.2.1.2 None
ERR9786604 Other None
SRR3675572 Other None
SRR3675477 Sensitive lineage4.9 None
ERR13265528 Other lineage4.9;lineage6.3 None
ERR3439432 Other M.canetti;lineage4.6.4;lineage4.9 None
SRR3675232 Other lineage4.1.2.1 None
ERR4797350 Sensitive lineage1;lineage4.9 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR9786569 Other lineage4.8 None
ERR4811030 Sensitive lineage4.9 None
SRR3675275 Other lineage4.9 None
ERR4798431 Sensitive lineage4.1;lineage4.9 None
ERR4811031 Sensitive lineage4.5 None
ERR6358755 Other lineage4.6.1.1 None
ERR987729 HR-TB lineage3.1.2.1;lineage3.1.2.2 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR9787139 Other lineage6.3.1 None
SRR12708409 HR-TB lineage4.3.3 None
ERR363498 Sensitive lineage4.9 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR3675522 Other lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
SRR3675216 Other lineage2.1;lineage4.9 None
SRR3675577 Sensitive lineage4.9 None
ERR400345 Other lineage4.9 None
SRR6046482 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR11662694 Other lineage4.9 None
ERR363474 Sensitive lineage4.9 None
ERR5311091 Other La3;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR216938 HR-TB La1.7;lineage4.9 None
ERR6865513 Other lineage4.1.2.1 None
SRR3675209 Sensitive lineage4.9 None
ERR400326 Other lineage4.9 None
ERR2514552 Sensitive lineage3 None
SRR3675236 Other None
SRR3675524 Other lineage4.9;lineage6.3 None
SRR6046802 Other lineage4.9 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
ERR363509 Sensitive lineage4.9 None
ERR363499 Sensitive lineage4.9 None
SRR1165699 Other lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
ERR4816466 HR-TB lineage4.9 None
SRR3675541 Sensitive lineage4.9 None
SRR3675387 Other lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR3290633 Other lineage4.2;lineage4.6.3;lineage4.9.1 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR6045050 Sensitive lineage4.3.2.1 None
SRR6044819 Sensitive lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
SRR6832249 Sensitive lineage2.2.1 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
SRR5341418 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.8.2;lineage4.9;lineage7 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR12708416 Sensitive None
ERR2513283 Sensitive lineage5.1.4 None
SRR7131023 Other lineage4.1.2.1 None
ERR9787197 Other None
ERR234659 Other None
ERR349264 Sensitive lineage4.9 None
SRR12142341 HR-TB lineage2.1 None
SRR5341333 Other lineage2.1;lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR5311097 Sensitive lineage4.2;lineage4.6.3;lineage4.9 None
SRR6045503 Sensitive lineage4.9 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR3283040 HR-TB lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
ERR4816113 Sensitive lineage4.1.1.1 None
ERR363453 Sensitive lineage4.9 None
SRR1172310 HR-TB lineage4.9 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR369163 Sensitive lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
ERR3283026 HR-TB lineage4.2;lineage4.6.3;lineage4.9.1 None
SRR12708399 MDR-TB lineage4.3.4.2.1 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR369158 Other lineage4.9 None
SRR11662696 MDR-TB La1.6;La3;M.canetti;lineage4.2.2 None
SRR3675265 Other lineage4 None
ERR5311079 Other La1.6;La3;M.canetti;lineage4.2;lineage4.9 None
ERR3797069 Other lineage4.9 None
ERR502943 Sensitive lineage2.2.1;lineage4 None
SRR26399973 Other La3;lineage4.9 None
ERR4819932 Other lineage4.7 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR3675550 RR-TB M.canetti;lineage4.2;lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR323039 HR-TB La2;lineage4.9 None
SRR3675292 Sensitive lineage4.9 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR363506 Sensitive lineage4.9 None
SRR3675455 Sensitive lineage4.9 None
SRR3675279 Sensitive lineage4.9 None
ERR349300 Sensitive lineage4.9 None
ERR363479 Sensitive lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6046066 Other lineage4.9 None
ERR2027263 Other lineage4 None
ERR6865502 Sensitive lineage4 None
SRR6046897 Sensitive lineage4.9 None
ERR4816999 Other None
ERR363449 Sensitive lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR4797588 MDR-TB lineage3 None
SRR29055629 MDR-TB La3;lineage2.2.1 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR1063846 HR-TB lineage4.9 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR3675260 Sensitive lineage4.9 None
SRR6046564 Sensitive lineage4.9 None
ERR13265748 Other lineage4.9;lineage6.3 None
ERR4812155 Other lineage4.9 None
SRR3675229 Sensitive lineage4.9 None
ERR363502 Other lineage4.9 None
ERR9117709 Other None
SRR6046824 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR3675581 Other lineage2.1;lineage4.9 None
SRR9970978 Sensitive La1;lineage4.1.2 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR363447 Other lineage4.9 None
SRR6045706 Sensitive lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR373947 Other lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
ERR349266 Sensitive lineage4.9 None
ERR373946 Sensitive lineage4.9 None
ERR9786645 Other lineage4.6.2.2 None
SRR7496472 Other lineage4.9 None
ERR403298 MDR-TB M.canetti;lineage4.2 None
SRR3675585 Sensitive lineage4.9 None
SRR2010299 MDR-TB lineage2.2.1 None
ERR3797070 Other lineage4.9 None
ERR4814480 HR-TB lineage4.1.2.1 gb
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR363456 Sensitive lineage4.9 None
ERR9786642 Other lineage4.1.2.1 None
ERR987722 MDR-TB None
SRR6789621 Other lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4814352 Other lineage2.2.1 None
ERR502889 Other La3;M.canetti;lineage4.2;lineage4.3;lineage4.6.4;lineage4.9 None
ERR349330 Sensitive lineage4.9 None
ERR363446 Sensitive lineage4.9 None
ERR9786421 Other lineage4.1.2.1 None
ERR4819781 Other lineage2.2.1 None
SRR1175507 Sensitive lineage4.1.1.3;lineage4.9 None
SRR1165667 Other lineage4.9;lineage6.3 None
ERR4815752 Other lineage4.9 None
SRR6045380 Other lineage2.1;lineage4.9 None
ERR133986 Other La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage7 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
SRR3675465 Other lineage4.9;lineage6.3 None
SRR6785413 Other lineage2.2.1 None
SRR23961558 Other lineage2.1;lineage4.9;lineage6.3 None
ERR9786694 Other lineage4.1.2.1 None
ERR4407463 HR-TB None
ERR9787165 Other lineage6.1.3 None
ERR4818021 Other La1.2.BCG;La1.8.1 None
ERR2513724 Sensitive lineage4.3.2.1 None
SRR3675508 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR867542 HR-TB lineage4.2.1.1;lineage4.3.3 None
SRR18213713 HR-TB None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR067681 MDR-TB La3;M.canetti;lineage4.2;lineage4.6.4;lineage4.9 None
SRR20969677 HR-TB La3;lineage2 None
SRR3675214 Other lineage4.9 None
ERR400320 Sensitive lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR18003019 Other lineage2.2.1 None
ERR9786682 Other lineage4.1.2.1 None
ERR9117721 HR-TB La3;lineage1.1.2 None
ERR4188247 HR-TB lineage4.9 None
SRR3675210 Sensitive lineage4.9 None
ERR4821686 Sensitive lineage4.1.2.1 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4178309 Other lineage4.1.2.1 None
ERR4816585 Other lineage2.2 None
ERR363421 Sensitive lineage4.9 None
SRR3675473 Sensitive lineage4.9 None
SRR15368973 Other lineage4.9 None