Rv1908c - p.Ser140Asn
Drug resistance types
0 Sensitive
0 RR-TB
139 HR-TB
59 MDR-TB
46 Pre-XDR-TB
0 XDR-TB
0 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.1.1.1 | 2 |
| lineage2.2.1 | 41 |
| lineage4.7 | 1 |
| lineage4.4.2 | 5 |
| lineage2.2 | 23 |
| lineage2.2.2 | 20 |
| lineage3 | 8 |
| lineage2.2.1.1 | 2 |
| 30 | |
| lineage4 | 20 |
| lineage4;lineage2.2.2 | 1 |
| lineage4.9 | 23 |
| lineage2.2.2;lineage2.2.1 | 2 |
| lineage4.5 | 3 |
| lineage4.9;lineage2 | 1 |
| lineage4.2.2.2 | 17 |
| lineage1.1.2 | 3 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage4.1.2.1 | 7 |
| La1.7.1 | 1 |
| lineage4.3 | 1 |
| lineage4.8 | 3 |
| lineage1.2.1.2 | 3 |
| lineage4.3.4 | 2 |
| lineage4.3.4.1 | 2 |
| lineage4.1.3 | 2 |
| lineage2.1 | 1 |
| lineage4.3.2.1 | 2 |
| lineage4.3.3 | 1 |
| lineage4.9;lineage4.2.1 | 1 |
| lineage4.1.1 | 1 |
| lineage4.1.1.3 | 2 |
| lineage4.1.2;lineage1.2.1.2.1 | 1 |
| lineage4.4.1.2 | 2 |
| lineage4.6.1.2 | 1 |
| La1.8.1 | 5 |
| La1 | 1 |
| lineage4.9;La1.8 | 1 |
| lineage4;lineage3.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 244 |
Geographic prevalence
Country level data for this variant is available for 18 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR9119435 | HR-TB | lineage1.1.1.1 | None | SRR22873609 | Pre-XDR-TB | lineage2.2.1 | None | ERR987707 | MDR-TB | lineage4.7 | None | ERR9119733 | MDR-TB | lineage2.2.1 | None | SRR1013565 | Pre-XDR-TB | lineage4.4.2 | None | SRR1013566 | Pre-XDR-TB | lineage4.4.2 | None | SRR1013554 | Pre-XDR-TB | lineage2.2 | None | SRR1013567 | Pre-XDR-TB | lineage2.2.2 | None | SRR1013553 | Pre-XDR-TB | lineage2.2 | None | SRR1013569 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013568 | Pre-XDR-TB | lineage2.2 | None | SRR1013578 | MDR-TB | lineage2.2 | None | SRR1013570 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013582 | Pre-XDR-TB | lineage2.2.1 | None | SRR1013577 | MDR-TB | lineage2.2 | None | SRR1013581 | Pre-XDR-TB | lineage2.2 | None | SRR1013589 | HR-TB | lineage2.2.1 | None | SRR1013584 | HR-TB | lineage2.2 | None | SRR1013583 | HR-TB | lineage2.2 | None | SRR1013595 | HR-TB | lineage3 | None | SRR1013590 | HR-TB | lineage2.2.1 | None | SRR1013597 | HR-TB | lineage2.2 | None | SRR1013600 | HR-TB | lineage2.2.1.1 | None | SRR1013596 | HR-TB | lineage3 | None | SRR1013599 | HR-TB | None | SRR1013598 | HR-TB | None | SRR1013603 | HR-TB | lineage2.2.1 | None | SRR1013601 | HR-TB | lineage2.2.1 | None | SRR1013607 | HR-TB | lineage2.2 | None | SRR1013604 | HR-TB | lineage2.2.1 | None | SRR1013610 | HR-TB | lineage4 | None | SRR1013608 | HR-TB | lineage2.2 | None | SRR1013609 | HR-TB | lineage4 | None | SRR1013602 | HR-TB | lineage2.2.1 | None | SRR1013611 | HR-TB | lineage4 | None | SRR1013614 | HR-TB | lineage2.2 | None | SRR1013617 | MDR-TB | None | SRR1013612 | HR-TB | lineage4 | None | SRR1013613 | HR-TB | lineage2.2.1 | None | SRR1013621 | Pre-XDR-TB | lineage2.2 | None | SRR1013618 | MDR-TB | None | SRR1013629 | Pre-XDR-TB | lineage2.2 | None | SRR1013622 | Pre-XDR-TB | lineage2.2 | None | SRR1013633 | MDR-TB | lineage2.2 | None | SRR1013634 | MDR-TB | lineage2.2 | None | SRR1013630 | Pre-XDR-TB | lineage2.2 | None | SRR1048853 | Pre-XDR-TB | lineage4;lineage2.2.2 | None | SRR1047993 | HR-TB | lineage2.2.1 | None | SRR1047996 | MDR-TB | lineage2.2.2 | None | SRR1048852 | Pre-XDR-TB | lineage4.9 | None | SRR1048866 | Pre-XDR-TB | lineage4.4.2 | None | SRR1048867 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048869 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048868 | Pre-XDR-TB | lineage2.2.2 | None | SRR1048865 | Pre-XDR-TB | lineage4.4.2 | None | SRR1048870 | Pre-XDR-TB | lineage2.2 | None | SRR1048885 | MDR-TB | None | SRR1048965 | Pre-XDR-TB | lineage2.2.1 | None | SRR1048969 | MDR-TB | lineage2.2.2 | None | SRR1048966 | Pre-XDR-TB | lineage2.2.1 | None | SRR1048968 | HR-TB | lineage2.2.2;lineage2.2.1 | None | SRR1048886 | MDR-TB | lineage2.2 | None | SRR1048982 | HR-TB | None | SRR1048975 | HR-TB | lineage2.2.1 | None | SRR1048974 | HR-TB | lineage2.2.1 | None | SRR1048980 | HR-TB | lineage3 | None | SRR1048988 | HR-TB | lineage2.2 | None | SRR1048983 | HR-TB | None | SRR1048985 | HR-TB | lineage2.2.1 | None | SRR1048992 | HR-TB | lineage2.2.2 | None | SRR1048987 | HR-TB | lineage2.2.1 | None | SRR1048986 | HR-TB | lineage2.2.1 | None | SRR1048991 | HR-TB | lineage2.2.2 | None | SRR1048993 | HR-TB | lineage4.9 | None | SRR1048995 | HR-TB | lineage4.5 | None | SRR1048997 | HR-TB | lineage2.2.1 | None | SRR1048994 | HR-TB | lineage4.9 | None | SRR1048996 | HR-TB | lineage4.5 | None | SRR1049004 | MDR-TB | lineage2.2.2 | None | SRR1048998 | HR-TB | lineage2.2.1 | None | SRR1049006 | MDR-TB | lineage2.2.2 | None | SRR1049005 | MDR-TB | lineage2.2.2 | None | SRR1049023 | HR-TB | lineage2.2 | None | SRR1049022 | HR-TB | lineage4.9;lineage2 | None | SRR1049007 | Pre-XDR-TB | lineage2.2.2 | None | SRR1049027 | Pre-XDR-TB | None | SRR1049040 | MDR-TB | lineage2.2.1 | None | SRR1049026 | Pre-XDR-TB | None | SRR1144744 | HR-TB | lineage2.2.1 | None | SRR1049041 | MDR-TB | None | SRR1166935 | Pre-XDR-TB | lineage4.2.2.2 | None | SRR1144759 | MDR-TB | lineage2.2 | None | SRR1144809 | HR-TB | lineage2.2.1 | None | SRR1162897 | Pre-XDR-TB | lineage4.2.2.2 | None | SRR1165366 | Pre-XDR-TB | lineage4.2.2.2 | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1167151 | Pre-XDR-TB | lineage4.2.2.2 | None | SRR1174291 | HR-TB | lineage1.1.2 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR12142369 | MDR-TB | lineage2.2.1 | None | SRR12416830 | MDR-TB | lineage2.2.2 | None | SRR16087928 | MDR-TB | lineage4.1.2.1 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR12416818 | Pre-XDR-TB | lineage4.3 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR19303813 | HR-TB | lineage4.8 | None | SRR18665477 | MDR-TB | lineage4.1.2.1 | None | SRR22873605 | Pre-XDR-TB | lineage2.2.1 | None | SRR21576603 | MDR-TB | lineage1.2.1.2 | None | SRR21747060 | MDR-TB | lineage1.2.1.2 | None | ERR11081700 | MDR-TB | lineage4.8 | None | SRR19428583 | HR-TB | lineage4.3.4 | None | SRR3675284 | HR-TB | lineage4.9 | None | SRR26056455 | MDR-TB | lineage4.1.2.1 | None | ERR176778 | HR-TB | None | ERR176779 | HR-TB | None | SAMN02360583 | HR-TB | lineage2.2.2 | None | ERR181824 | HR-TB | lineage4 | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675456 | HR-TB | None | ERR181887 | HR-TB | None | ERR176651 | HR-TB | None | SRR3675312 | HR-TB | lineage4 | None | SAMN02360556 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02360581 | HR-TB | lineage2.2.1 | None | SAMN02360562 | Pre-XDR-TB | lineage4.4.2 | None | SAMN02360586 | HR-TB | lineage2.2.1 | None | SAMN02360590 | MDR-TB | lineage2.2.2 | None | ERR3275996 | HR-TB | lineage4.3.4.1 | nl | SAMN02360595 | Pre-XDR-TB | lineage2.2.2 | None | ERR552844 | HR-TB | lineage4.1.3 | None | SRR5341422 | HR-TB | lineage2.1 | None | SRR3675555 | HR-TB | None | ERR212125 | HR-TB | lineage4 | None | ERR216965 | HR-TB | lineage4.9 | None | SAMN02360571 | HR-TB | lineage2.2.2;lineage2.2.1 | None | ERR3275336 | MDR-TB | lineage4.2.2.2 | nl | SAMN02360570 | Pre-XDR-TB | lineage2.2.1 | None | SAMN02360591 | Pre-XDR-TB | lineage2.2.2 | None | SAMN02360574 | HR-TB | lineage2.2.1 | None | SAMN02398710 | MDR-TB | lineage2.2.2 | None | SAMN02360580 | HR-TB | lineage2.2.1 | None | ERR4818929 | HR-TB | None | SRR2101316 | HR-TB | lineage4.3.2.1 | None | SAMN02360577 | HR-TB | lineage3 | None | SRR5341373 | HR-TB | lineage4 | None | ERR1555050 | MDR-TB | lineage4.3.4.1 | None | SRR5153091 | HR-TB | lineage4.3.3 | None | SAMN02360579 | HR-TB | lineage2.2.1.1 | None | SAMN02360564 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341432 | HR-TB | lineage4 | None | SAMN02598978 | HR-TB | lineage1.1.2 | None | SAMN02414970 | Pre-XDR-TB | lineage4.2.2.2 | se | SAMN02360585 | HR-TB | lineage4.5 | None | ERR2446183 | MDR-TB | lineage4.2.2.2 | nl | SRR5341400 | HR-TB | lineage4 | None | SAMN02360563 | Pre-XDR-TB | lineage2.2.2 | None | SRR5341313 | HR-TB | None | SRR6044875 | HR-TB | lineage4.9 | None | ERR552843 | HR-TB | lineage4.1.3 | cg | SRR6045795 | HR-TB | lineage2.2.1 | None | ERR4821747 | MDR-TB | lineage4.9;lineage4.2.1 | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6045002 | MDR-TB | lineage4.9 | None | ERR4798946 | MDR-TB | lineage1.1.2 | in | SRR6046395 | HR-TB | lineage4.9 | None | ERR1213825 | MDR-TB | lineage4.1.2.1 | pe | SRR6046382 | HR-TB | lineage2.2.1 | None | ERR4830805 | MDR-TB | lineage4.2.2.2 | et | ERR4830039 | HR-TB | lineage2.2.1 | None | ERR4830044 | HR-TB | lineage2.2.1 | None | ERR2517569 | MDR-TB | lineage4.2.2.2 | nl | ERR4830799 | MDR-TB | lineage4.2.2.2 | et | ERR4830803 | Pre-XDR-TB | lineage4.2.2.2 | et | ERR323037 | HR-TB | lineage4 | None | ERR4830822 | Pre-XDR-TB | lineage4.2.2.2 | et | ERR4830845 | MDR-TB | lineage4.2.2.2 | et | ERR4830830 | Pre-XDR-TB | lineage4.2.2.2 | et | ERR3132274 | MDR-TB | lineage4.1.2.1 | None | SRR6785277 | HR-TB | lineage2.2.1 | None | ERR2935863 | MDR-TB | lineage4.1.1 | None | SRR6982239 | HR-TB | lineage4.1.1.3 | None | SRR6896464 | HR-TB | lineage4.3.2.1 | None | ERR3132148 | MDR-TB | lineage4.1.2.1 | None | ERR2510326 | MDR-TB | lineage3 | pk | SRR6930927 | MDR-TB | lineage1.2.1.2 | None | ERR3287877 | MDR-TB | lineage4.1.1.3 | pe | ERR2510638 | MDR-TB | lineage3 | pk | ERR5162122 | HR-TB | lineage4.9 | None | ERR3132157 | MDR-TB | lineage4.1.2;lineage1.2.1.2.1 | None | ERR323108 | HR-TB | lineage4 | None | SRR7535080 | HR-TB | lineage4.8 | None | ERR323045 | HR-TB | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | SRR7535077 | MDR-TB | lineage4.6.1.2 | None | ERR11488933 | MDR-TB | lineage3 | None | ERR11489005 | MDR-TB | lineage3 | None | ERR1023525 | HR-TB | lineage4 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR1034634 | HR-TB | None | ERR3468561 | HR-TB | lineage4.9 | None | ERR126597 | MDR-TB | lineage4.4.1.2 | None | ERR3283013 | MDR-TB | lineage4 | None | ERR3283021 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283040 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR3468551 | HR-TB | La1.8.1 | None | ERR1063862 | HR-TB | None | ERR1063858 | HR-TB | None | ERR1063859 | HR-TB | None | ERR108471 | HR-TB | lineage4 | None | ERR3283031 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3468550 | HR-TB | La1.8.1 | None | ERR3797015 | HR-TB | None | ERR3468577 | HR-TB | La1 | None | ERR3468601 | HR-TB | La1.8.1 | None | ERR3468608 | HR-TB | La1.8.1 | None | ERR3468619 | HR-TB | lineage4.9;La1.8 | None | ERR3468644 | HR-TB | La1.8.1 | None | ERR3797063 | HR-TB | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR387051 | HR-TB | None | ERR4011971 | MDR-TB | lineage4.2.2.2 | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR473323 | HR-TB | lineage4.9 | None | ERR5987263 | MDR-TB | lineage2.2.1 | None | ERR4830463 | HR-TB | lineage1.1.1.1 | vn | ERR4769442 | HR-TB | lineage4 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4796472 | Pre-XDR-TB | lineage2.2.1 | None | SRR17657941 | MDR-TB | lineage4.1.2.1 | None | ERR6358951 | HR-TB | lineage4 | None | ERR6359074 | HR-TB | lineage4.9 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR7737654 | MDR-TB | lineage4.2.2.2 | None | ERR736875 | HR-TB | lineage4 | None | ERR7737624 | MDR-TB | lineage4.2.2.2 | None |
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