SRR12708415
|
HR-TB
|
lineage2.2.1
|
None
|
SRR12708418
|
HR-TB
|
lineage2.2.1
|
None
|
SRR14801759
|
HR-TB
|
La1.7;lineage4.9
|
None
|
SRR1184021
|
Sensitive
|
lineage4.9
|
None
|
SRR3675473
|
Sensitive
|
lineage4.9
|
None
|
SRR12708407
|
HR-TB
|
lineage4.3.2.1
|
None
|
ERR6359066
|
HR-TB
|
lineage4.9
|
None
|
SRR5341345
|
Sensitive
|
lineage4.9
|
None
|
ERR3797015
|
HR-TB
|
lineage4.9
|
None
|
SRR12708398
|
Sensitive
|
lineage4.4.1.1
|
None
|
ERR4769521
|
RR-TB
|
lineage4.9
|
None
|
ERR323045
|
HR-TB
|
lineage1;lineage4.9
|
None
|
SRR1181283
|
Sensitive
|
lineage4.9
|
None
|
ERR926158
|
Sensitive
|
lineage4.9
|
None
|
SRR22424787
|
Sensitive
|
lineage4.9
|
None
|
ERR4816470
|
HR-TB
|
lineage3
|
None
|
ERR4798648
|
MDR-TB
|
lineage3.1.2.2
|
None
|
ERR4797588
|
MDR-TB
|
lineage3
|
None
|
ERR216938
|
HR-TB
|
La1.7;lineage4.9
|
None
|
ERR067699
|
Sensitive
|
La1;lineage2;lineage4.9
|
None
|
SRR7496471
|
Sensitive
|
lineage4
|
None
|
ERR926161
|
Sensitive
|
lineage4.9
|
None
|
ERR400326
|
Other
|
lineage4.9
|
None
|
SRR6046245
|
Other
|
lineage4.9
|
None
|
ERR3797043
|
Sensitive
|
lineage4.9
|
None
|
SRR12708411
|
HR-TB
|
lineage1.2.2.2
|
None
|
ERR4814639
|
HR-TB
|
lineage4.9
|
None
|
SRR5341323
|
Sensitive
|
lineage4.9
|
None
|
SRR1180319
|
Sensitive
|
lineage4.9
|
None
|
SRR1181349
|
Sensitive
|
lineage4
|
None
|
SRR1172885
|
HR-TB
|
lineage4.9
|
None
|
ERR4596910
|
Sensitive
|
lineage4.9
|
None
|
ERR926154
|
Sensitive
|
lineage4.9
|
None
|
ERR4819546
|
HR-TB
|
lineage3
|
None
|
SRR3675247
|
Other
|
lineage4.9
|
None
|
SRR1175512
|
Sensitive
|
lineage4.9
|
None
|
ERR3797086
|
Sensitive
|
lineage4.9
|
None
|
SRR1180399
|
Sensitive
|
lineage4.9
|
None
|
ERR1034634
|
HR-TB
|
lineage4.9
|
None
|
SRR6044819
|
Sensitive
|
lineage4.9
|
None
|
ERR4800102
|
Sensitive
|
lineage3.1.2.1
|
None
|
SRR1180413
|
Sensitive
|
lineage4.9
|
None
|
SRR5341315
|
Other
|
La1.7;lineage3;lineage4.9;lineage7
|
None
|
SRR1181390
|
Sensitive
|
lineage2.2.1;lineage4.9
|
None
|
SRR12708416
|
Sensitive
|
|
None
|
ERR3797081
|
Sensitive
|
lineage4.9
|
None
|
SRR12708419
|
Other
|
lineage4.3.3
|
None
|
SRR14066533
|
Sensitive
|
lineage1.1.1
|
None
|
SRR20632814
|
Sensitive
|
lineage4.9
|
None
|
ERR4797313
|
Sensitive
|
lineage2.2.1
|
None
|
SRR1173633
|
Other
|
lineage4.9
|
None
|
SRR7496523
|
Other
|
lineage4.7
|
None
|
SRR1180312
|
Sensitive
|
lineage4.9
|
None
|
SRR17832802
|
HR-TB
|
lineage3
|
None
|
ERR4815310
|
Other
|
lineage2.2.1;lineage4.9
|
None
|
ERR4797350
|
Sensitive
|
lineage1;lineage4.9
|
None
|
SRR29096410
|
Other
|
lineage4.9
|
None
|
ERR4798823
|
HR-TB
|
lineage4
|
None
|
ERR4828872
|
Sensitive
|
lineage4.2;lineage4.9
|
None
|
ERR926157
|
Sensitive
|
lineage4.9
|
None
|
SRR1175506
|
Sensitive
|
lineage4.9
|
None
|
SRR1180250
|
Other
|
lineage4.9
|
None
|
ERR4769444
|
HR-TB
|
lineage4.9
|
None
|
SRR6045359
|
Sensitive
|
lineage4.9
|
None
|
ERR4811031
|
Sensitive
|
lineage4.5
|
None
|
SRR12708414
|
HR-TB
|
lineage2.2.1
|
None
|
SRR1181403
|
Other
|
lineage4.9
|
None
|
ERR4769417
|
Pre-XDR-TB
|
lineage4.9
|
None
|
ERR987729
|
HR-TB
|
lineage3.1.2.1;lineage3.1.2.2
|
None
|
ERR4799989
|
Pre-XDR-TB
|
lineage2.2.1.2
|
None
|
SRR1181215
|
Sensitive
|
lineage4.4.1.1.1
|
None
|
SRR1180375
|
Sensitive
|
lineage4.9
|
None
|
SRR1180391
|
Sensitive
|
lineage4.9
|
None
|
ERR473323
|
HR-TB
|
lineage4.9
|
None
|
SRR1180444
|
Sensitive
|
lineage4.9
|
None
|
SRR12708384
|
Sensitive
|
lineage4.9
|
None
|
SRR12708413
|
HR-TB
|
lineage4.1.1.3
|
None
|
SRR1792478
|
HR-TB
|
La1.7.1
|
None
|
ERR473277
|
HR-TB
|
La3;M.canetti;lineage4.9
|
None
|
ERR323108
|
HR-TB
|
La1.7;lineage4.9
|
None
|
ERR2513259
|
Other
|
lineage3
|
None
|
SRR3675455
|
Sensitive
|
lineage4.9
|
None
|
SRR1184114
|
Sensitive
|
lineage2.2.1;lineage4.9
|
None
|
SRR9971150
|
RR-TB
|
lineage4.8.1
|
None
|
ERR926160
|
Sensitive
|
lineage4.9
|
None
|
SRR1180420
|
Sensitive
|
lineage4.9
|
None
|
ERR11465628
|
Sensitive
|
lineage4.3.4.2.1
|
None
|
ERR4819051
|
Sensitive
|
lineage4.9
|
None
|
ERR4820043
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR3445503
|
Other
|
La1.7.1;La1.7.X-unk4
|
None
|
SRR5341470
|
MDR-TB
|
lineage4.9;lineage9
|
None
|
SRR12708370
|
Pre-XDR-TB
|
lineage2.2.2
|
None
|
ERR6359074
|
HR-TB
|
lineage4.9
|
None
|
SRR12708392
|
Other
|
lineage2.2.1
|
None
|
ERR1023525
|
HR-TB
|
La1.7;lineage4.9
|
None
|
ERR323053
|
MDR-TB
|
La2;lineage4.9;lineage9
|
None
|
ERR1063859
|
HR-TB
|
La1.7.1;lineage4.9
|
None
|
SRR1183054
|
Sensitive
|
lineage4.9
|
None
|
SRR1180977
|
Sensitive
|
lineage4.9
|
None
|
SRR6046564
|
Sensitive
|
lineage4.9
|
None
|
ERR108471
|
HR-TB
|
lineage4.9
|
None
|
ERR4769493
|
Other
|
lineage4.9
|
None
|
ERR4812155
|
Other
|
lineage4.9
|
None
|
SRR3675229
|
Sensitive
|
lineage4.9
|
None
|
ERR133825
|
HR-TB
|
La1;lineage4.9
|
None
|
SRR5341437
|
Sensitive
|
lineage4.9
|
None
|
ERR3797047
|
MDR-TB
|
lineage4.9
|
None
|
ERR323056
|
HR-TB
|
lineage4.4.1.2
|
None
|
SRR21677886
|
Sensitive
|
lineage4.9
|
None
|
ERR473332
|
Other
|
lineage4.9
|
None
|
SRR5341422
|
HR-TB
|
La1.7;lineage4.9;lineage7
|
None
|
SRR1181351
|
Sensitive
|
lineage4.9
|
None
|
ERR3283018
|
HR-TB
|
lineage4.9
|
None
|
SRR1915487
|
Other
|
La1.2.BCG
|
None
|
ERR4800527
|
MDR-TB
|
lineage2.2.1
|
None
|
SRR1181402
|
Sensitive
|
lineage4.9
|
None
|
ERR3283025
|
MDR-TB
|
La1.7;lineage4.9
|
None
|
ERR987722
|
MDR-TB
|
|
None
|
ERR4769442
|
Sensitive
|
lineage4.9
|
None
|
SRR6046295
|
HR-TB
|
lineage4.2;lineage4.9
|
None
|
SRR1180355
|
Sensitive
|
lineage4.9
|
None
|
SRR6046397
|
Other
|
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3
|
None
|
SRR9971270
|
RR-TB
|
lineage2.2.1
|
None
|
ERR926165
|
Sensitive
|
lineage4.9
|
None
|
SRR6046385
|
Sensitive
|
lineage4.9
|
None
|
SRR1175513
|
Sensitive
|
lineage4.9
|
None
|
SRR1180410
|
Sensitive
|
lineage4.9
|
None
|
ERR502524
|
HR-TB
|
lineage4.9;lineage6.3
|
None
|
ERR1063858
|
HR-TB
|
lineage4.9
|
None
|
ERR2512770
|
Sensitive
|
lineage4.2.1
|
None
|
SRR6045010
|
Sensitive
|
lineage4.9
|
None
|
ERR926155
|
Sensitive
|
lineage4.9
|
None
|
SRR1181325
|
Sensitive
|
lineage4.9
|
None
|
ERR176651
|
Other
|
lineage4.9
|
None
|
ERR3797029
|
Other
|
lineage4.9
|
None
|
SRR1175052
|
HR-TB
|
lineage4.9
|
None
|
ERR4769439
|
HR-TB
|
lineage4.9
|
None
|
ERR4810624
|
MDR-TB
|
lineage2.2
|
None
|
SRR1180345
|
Other
|
lineage4.9
|
None
|
SRR1175496
|
Sensitive
|
lineage4.9
|
None
|
ERR3797080
|
Sensitive
|
lineage4.9
|
None
|
SRR12708409
|
HR-TB
|
lineage4.3.3
|
None
|
ERR400320
|
Sensitive
|
lineage4.9
|
None
|
SRR1180946
|
Sensitive
|
lineage2;lineage4.9
|
None
|
ERR9119669
|
HR-TB
|
lineage4.9
|
None
|
SRR3675522
|
Other
|
lineage4.9
|
None
|
ERR4817667
|
HR-TB
|
lineage4.8
|
None
|
SRR1181237
|
Sensitive
|
lineage2.2.1;lineage4
|
None
|
ERR926162
|
Sensitive
|
lineage4.9
|
None
|
ERR736848
|
Other
|
lineage4.9
|
None
|
ERR4815550
|
Other
|
lineage2.2;lineage4.9
|
None
|
ERR067712
|
Sensitive
|
lineage4.9
|
None
|
ERR1063857
|
MDR-TB
|
La2;lineage4.9
|
None
|
SRR10315751
|
MDR-TB
|
lineage4.8
|
None
|
SRR1175487
|
Sensitive
|
lineage4.9
|
None
|
SRR1174897
|
MDR-TB
|
lineage4.9;lineage9
|
None
|
ERR4818561
|
Sensitive
|
lineage4.9
|
None
|
ERR3283030
|
HR-TB
|
lineage4.9
|
None
|
SRR12708374
|
Sensitive
|
lineage4.1;lineage4.9
|
None
|
SRR13423649
|
Sensitive
|
lineage2.2.1
|
None
|
ERR4817628
|
Sensitive
|
lineage4.8
|
gb
|
ERR11466444
|
Sensitive
|
lineage4.3.4.1
|
None
|
ERR4769474
|
HR-TB
|
lineage4.9
|
None
|
ERR1873492
|
HR-TB
|
M.canetti;lineage2.2.2;lineage6.2
|
None
|
ERR294266
|
HR-TB
|
lineage4.2;lineage4.8.1;lineage4.9
|
None
|
ERR6866125
|
Sensitive
|
lineage4.1.2.1
|
None
|
ERR1063846
|
HR-TB
|
lineage4.9
|
None
|
ERR1063862
|
HR-TB
|
lineage4.9
|
None
|
ERR926163
|
Other
|
lineage4.9
|
None
|
ERR3283021
|
HR-TB
|
lineage4.9
|
None
|
ERR4596902
|
MDR-TB
|
lineage3
|
None
|
ERR926159
|
Sensitive
|
lineage4.9
|
None
|
SRR12708372
|
Sensitive
|
lineage4.9
|
None
|
SRR7535086
|
Other
|
|
None
|
ERR3797073
|
Other
|
La1.8.1
|
None
|
ERR971389
|
Sensitive
|
lineage4.9
|
None
|
ERR9786711
|
Sensitive
|
lineage4.6.2.2
|
None
|
ERR1063849
|
HR-TB
|
lineage4.9
|
None
|
ERR926164
|
Other
|
lineage4.9
|
None
|
SRR1180172
|
Other
|
lineage2.2.1
|
None
|
ERR3799304
|
Other
|
lineage6.1.1
|
None
|
SRR1183111
|
HR-TB
|
lineage4.9
|
None
|
SRR3675517
|
Other
|
La3;lineage2.1;lineage4.9;lineage6.3
|
None
|
SRR6045785
|
MDR-TB
|
lineage4.2;lineage4.8.1;lineage4.9
|
None
|
ERR5311094
|
HR-TB
|
lineage4.9
|
None
|
ERR9787030
|
RR-TB
|
lineage6.1.2
|
None
|
SRR1180147
|
Other
|
lineage2.2.1.1
|
None
|
SRR1183144
|
Other
|
lineage2.2.1
|
None
|
SRR1183106
|
RR-TB
|
lineage2.2.1.1
|
None
|
ERR4815815
|
Sensitive
|
lineage4.9
|
None
|
ERR2513283
|
Sensitive
|
lineage5.1.4
|
None
|
SRR6046026
|
RR-TB
|
lineage4.2;lineage4.9
|
None
|
ERR3801503
|
Sensitive
|
lineage4.6.2.2
|
None
|
ERR926156
|
Sensitive
|
lineage4.9
|
None
|
ERR9786076
|
Sensitive
|
lineage3
|
None
|
SRR1181256
|
Other
|
lineage4.9
|
None
|
ERR2513229
|
MDR-TB
|
lineage2.2.1
|
None
|
ERR736865
|
HR-TB
|
lineage4.3.2;lineage4.9
|
None
|
ERR736835
|
HR-TB
|
La1.7;M.canetti;lineage4.9
|
None
|
SRR18913742
|
Sensitive
|
lineage3.1.3
|
None
|
SRR12708396
|
MDR-TB
|
lineage4.3.2.1
|
None
|
SRR1181214
|
Other
|
lineage4.9
|
None
|
ERR6866807
|
Other
|
lineage4.9
|
None
|
ERR3283042
|
Other
|
lineage4.9
|
None
|
ERR4796577
|
HR-TB
|
|
None
|
ERR4816762
|
Sensitive
|
lineage4.9
|
None
|
ERR3283040
|
HR-TB
|
lineage4.9
|
None
|
SRR1180406
|
Sensitive
|
lineage4.9
|
None
|
ERR4811030
|
Sensitive
|
lineage4.9
|
None
|
SRR3675571
|
HR-TB
|
M.canetti;lineage4.2;lineage4.9
|
None
|
SRR1172310
|
HR-TB
|
lineage4.9
|
None
|
ERR9787014
|
Other
|
lineage6.1.1
|
None
|
ERR6358755
|
Other
|
lineage4.6.1.1
|
None
|
ERR867542
|
HR-TB
|
lineage4.2.1.1;lineage4.3.3
|
None
|
SRR6044875
|
Sensitive
|
lineage4.9
|
None
|
ERR736817
|
HR-TB
|
lineage4.3.4
|
None
|
ERR4831841
|
HR-TB
|
lineage2.2.1;lineage4.4.2
|
None
|
SRR12708399
|
MDR-TB
|
lineage4.3.4.2.1
|
None
|
SRR1180300
|
Sensitive
|
lineage4.9
|
None
|
ERR4831546
|
HR-TB
|
M.canetti;lineage2.2.2;lineage6.2
|
None
|
SRR3675520
|
Other
|
La1.7.X-unk4;lineage4.9
|
None
|
ERR1063839
|
MDR-TB
|
La2;lineage2.2
|
None
|
ERR323039
|
HR-TB
|
La2;lineage4.9
|
None
|
ERR4821686
|
Sensitive
|
lineage4.1.2.1
|
None
|