lineage | Count |
---|---|
La1;lineage4.9 | 2 |
lineage4.2;lineage4.9 | 2 |
lineage2.1 | 5 |
lineage4.9 | 20 |
lineage2.1;lineage4.9 | 1 |
lineage1.1.2 | 1 |
La1.2;La1.8.1 | 1 |
La1.7;lineage3.1;lineage4 | 1 |
lineage4.9;lineage9 | 1 |
lineage4.9;lineage6.3 | 1 |
La1.7;lineage4.9 | 5 |
La1;lineage4.1.2 | 1 |
lineage4.2;lineage4.8.1;lineage4.9 | 1 |
La1.7.1 | 1 |
lineage4.6.3;lineage4.9 | 1 |
lineage4.1.1.2 | 1 |
M.canetti;lineage4.9 | 2 |
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
La3;lineage4.9 | 1 |
lineage4.6.1.1 | 2 |
lineage2.2.1 | 1 |
M.canetti;lineage4.9;lineage9 | 1 |
La1.7.X-unk4;lineage4.9 | 1 |
M.canetti;lineage1 | 1 |
lineage4.4.1.2 | 1 |
spoligotype | Count |
---|---|
None | 56 |
ID | Drug resistance | Lineage | Country iso2 | ERR4769497 | Other | La1;lineage4.9 | None | SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None | ERR4831996 | MDR-TB | lineage2.1 | vn | SRR6045010 | Sensitive | lineage4.9 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR736856 | Sensitive | lineage4.9 | None | ERR3797015 | HR-TB | lineage4.9 | None | SRR21733183 | RR-TB | lineage1.1.2 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | ERR212121 | HR-TB | lineage4.9;lineage6.3 | None | ERR1023525 | HR-TB | La1.7;lineage4.9 | None | SRR26159035 | Sensitive | lineage4.9 | None | SRR9970978 | Sensitive | La1;lineage4.1.2 | None | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR5311094 | HR-TB | lineage4.9 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4831974 | MDR-TB | lineage2.1 | vn | SRR29055611 | Sensitive | lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR6046577 | Other | lineage4.6.3;lineage4.9 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | ERR4819051 | Sensitive | lineage4.9 | None | ERR4818252 | Sensitive | lineage4.1.1.2 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | SRR29096387 | Sensitive | M.canetti;lineage4.9 | None | ERR4816466 | HR-TB | lineage4.9 | None | ERR176751 | Other | lineage4.9 | None | ERR3797086 | Sensitive | lineage4.9 | None | ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None | ERR4831956 | MDR-TB | lineage2.1 | None | SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | SRR3675510 | Sensitive | La3;lineage4.9 | None | ERR13285192 | Sensitive | lineage4.9 | None | SRR26399239 | Sensitive | lineage4.9 | None | ERR1199132 | Sensitive | lineage4.6.1.1 | None | ERR3283040 | HR-TB | lineage4.9 | None | SRR28351584 | HR-TB | lineage2.2.1 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | SRR5065560 | MDR-TB | lineage2.1 | vn | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | ERR3797028 | HR-TB | M.canetti;lineage4.9 | None | ERR987765 | Sensitive | lineage4.6.1.1 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR2446566 | Other | lineage4.9 | None | SRR5341330 | Other | lineage4.9 | None | SRR15014655 | Other | M.canetti;lineage1 | None | SRR10808805 | Other | La1;lineage4.9 | None | ERR13285191 | Sensitive | lineage4.9 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR4832016 | MDR-TB | lineage2.1 | None | SRR29051386 | Sensitive | lineage4.9 | None | SRR10808730 | Other | lineage4.9 | None |
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