EBG00000313339 - n.625G>A
Drug resistance types
91 Sensitive
4 RR-TB
42 HR-TB
9 MDR-TB
7 Pre-XDR-TB
0 XDR-TB
72 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 31 |
| lineage4.1.2.1 | 14 |
| lineage2.2.1 | 20 |
| lineage4.3.3 | 7 |
| lineage4.8 | 7 |
| lineage6 | 1 |
| lineage4 | 59 |
| lineage4.1 | 1 |
| lineage4.3.4 | 2 |
| 33 | |
| lineage3 | 11 |
| lineage4.1.3;lineage1.1.2 | 1 |
| lineage4.1.3;lineage4.1.2.1;lineage1.1.2 | 1 |
| lineage2.1 | 1 |
| lineage4.1.1 | 1 |
| lineage4.7 | 1 |
| lineage3.1.3 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4.6.2.2 | 3 |
| lineage4.2.1 | 2 |
| lineage4.5 | 2 |
| lineage1.1.2 | 4 |
| lineage4.1.2 | 1 |
| lineage4.3.2.1 | 3 |
| lineage4.3.1.1 | 2 |
| lineage3.1.1 | 1 |
| lineage2.2 | 4 |
| lineage2.2.1.1 | 1 |
| lineage4.5;lineage2.2 | 1 |
| lineage5.1.2 | 1 |
| La1.2 | 1 |
| lineage4.3 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.8;lineage4.1 | 2 |
| lineage1.2.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 225 |
Geographic prevalence
Country level data for this variant is available for 13 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR13837646 | Sensitive | lineage4.9 | None | SRR19304115 | Other | lineage4.1.2.1 | None | SRR18002933 | Other | lineage2.2.1 | None | SRR18003023 | Other | lineage2.2.1 | None | SRR19303796 | Other | lineage4.3.3 | None | SRR19303985 | Other | lineage4.8 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002903 | Pre-XDR-TB | lineage2.2.1 | None | SRR18002947 | MDR-TB | lineage2.2.1 | None | SRR18002967 | Pre-XDR-TB | lineage2.2.1 | None | SRR18003027 | Other | lineage2.2.1 | None | SRR19304094 | Other | lineage6 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR20632814 | Sensitive | lineage4 | None | SRR12708416 | Sensitive | lineage4.1 | None | ERR161039 | Sensitive | lineage4.3.4 | None | SRR3675472 | Sensitive | lineage4.9 | None | ERR176779 | HR-TB | None | ERR176778 | HR-TB | None | SRR3675477 | Other | lineage4.9 | None | ERR4814576 | Sensitive | lineage4.8 | gb | ERR4815784 | Other | lineage2.2.1 | gb | SRR3675209 | Sensitive | lineage4.9 | None | ERR4815452 | Other | lineage4.3.3 | None | ERR181744 | HR-TB | None | SRR3675230 | RR-TB | lineage3 | None | SRR3675210 | Sensitive | lineage4.9 | None | SRR3675229 | Other | lineage4 | None | ERR4819579 | HR-TB | lineage4.3.3 | None | SRR3675249 | Sensitive | lineage4.9 | None | ERR181824 | HR-TB | lineage4 | None | ERR4814763 | Other | lineage2.2.1 | None | SRR3675247 | Other | lineage4.9 | None | ERR4815515 | Sensitive | lineage4.1.3;lineage1.1.2 | None | SRR3675266 | Sensitive | lineage4.9 | None | SRR3675279 | Other | None | SRR3675283 | Sensitive | lineage4.9 | None | ERR4814952 | Sensitive | lineage3 | None | SRR3675292 | Sensitive | lineage4 | None | SRR3675318 | Other | lineage4.9 | None | ERR176651 | HR-TB | None | ERR181887 | HR-TB | None | SRR3675522 | Other | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675387 | Sensitive | None | SRR3675456 | HR-TB | None | SRR3675537 | Sensitive | lineage4.9 | None | ERR4817511 | Other | lineage3 | None | SRR3675542 | Other | lineage4.9 | None | ERR4816100 | Sensitive | lineage4.1.3;lineage4.1.2.1;lineage1.1.2 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675565 | Other | lineage3 | None | SRR3675548 | Sensitive | lineage4.9 | None | SRR3675553 | Sensitive | lineage4.9 | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR4817046 | Other | lineage3 | None | ERR4816243 | Sensitive | lineage3 | None | ERR212034 | HR-TB | None | SRR3675555 | HR-TB | None | ERR4816113 | Sensitive | lineage4.1.1 | None | ERR4816270 | Other | lineage4.1.2.1 | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR212123 | Other | None | ERR212125 | HR-TB | lineage4 | None | ERR4816470 | Other | lineage3 | None | ERR212138 | HR-TB | lineage4 | None | ERR4817131 | Pre-XDR-TB | None | ERR2513082 | Other | lineage4.1.2.1 | gb | ERR216965 | HR-TB | lineage4.9 | None | ERR4817189 | Other | lineage4.7 | None | ERR4817276 | Other | lineage2.2.1 | None | ERR4816856 | Other | lineage4.1.2.1 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR2513589 | Other | lineage3.1.3 | None | ERR4818724 | Other | lineage4.1.2.1 | gb | ERR4817175 | Other | lineage4.8 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR2513438 | Sensitive | lineage4.1.2.1 | None | ERR4818050 | Other | lineage4.6.2.2 | None | ERR2512770 | Other | lineage4.2.1 | None | ERR4818287 | Other | lineage4.5 | gb | SRR5341373 | HR-TB | lineage4 | None | ERR4818570 | Other | lineage4.3.3 | None | ERR4818548 | Other | lineage4.3.3 | None | ERR2512884 | Other | lineage4.6.2.2 | gb | ERR2512941 | Other | lineage1.1.2 | None | ERR4819198 | Other | lineage2.2.1 | None | ERR2513743 | Other | lineage4.1.2 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | SRR5341396 | Other | lineage4 | None | ERR4819242 | HR-TB | lineage4.6.2.2 | None | ERR4820746 | RR-TB | lineage3 | None | ERR4819324 | Other | lineage4.8 | gb | SRR5341400 | HR-TB | lineage4 | None | ERR2513994 | MDR-TB | lineage2.2.1 | gb | SRR5341408 | Sensitive | lineage3 | None | ERR4820736 | Other | lineage4.1.2.1 | gb | SRR5341296 | Sensitive | lineage4.9 | None | ERR2514351 | Sensitive | lineage3 | gb | SRR5341293 | HR-TB | lineage4 | None | SRR5341432 | HR-TB | lineage4 | None | ERR1035138 | MDR-TB | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR4820817 | Other | lineage4.1.2.1 | None | SRR5341323 | Sensitive | lineage4 | None | SRR5341313 | HR-TB | None | SRR5341315 | Sensitive | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR2517475 | Other | lineage4 | None | ERR4820151 | RR-TB | lineage4.8 | None | SRR6046089 | Other | lineage4.1.2.1 | None | SRR6045543 | Sensitive | lineage4.3.1.1 | gb | SRR6045516 | Other | lineage3.1.1 | None | SRR6045503 | HR-TB | None | ERR4821222 | Other | lineage4.3.2.1 | None | ERR2660479 | Sensitive | lineage1.1.2 | None | SRR6045706 | Sensitive | lineage4 | None | ERR4822225 | Sensitive | lineage3 | gb | ERR4821686 | Sensitive | lineage4.1.2.1 | None | ERR2693227 | Other | lineage4.9 | None | ERR4821286 | Other | lineage4.8 | None | ERR4821704 | MDR-TB | lineage4.3.3 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | SRR6046343 | Other | lineage2.2.1 | None | ERR4829337 | Other | lineage4.8 | None | SRR6046863 | Sensitive | lineage1.1.2 | None | SRR6046534 | Other | lineage1.1.2 | None | SRR6046616 | Other | lineage4.3.1.1 | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046802 | Other | lineage4 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | SRR6046897 | Sensitive | lineage4 | None | ERR4831777 | MDR-TB | lineage2.2.1.1 | vn | ERR4831638 | Sensitive | None | ERR4831763 | HR-TB | lineage4.5;lineage2.2 | None | ERR502943 | HR-TB | None | ERR1063857 | HR-TB | None | ERR1063839 | HR-TB | lineage2.2 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR323045 | HR-TB | None | ERR323108 | HR-TB | lineage4 | None | ERR1063858 | HR-TB | None | ERR1063862 | HR-TB | None | ERR3445503 | HR-TB | None | ERR1063859 | HR-TB | None | ERR349264 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349265 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349298 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR369158 | Sensitive | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR373945 | HR-TB | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR387051 | HR-TB | None | ERR400320 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR4178226 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR400538 | RR-TB | lineage5.1.2 | None | ERR400345 | Other | lineage4 | None | ERR736839 | Other | None | ERR473332 | Other | lineage4 | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4798431 | HR-TB | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4811030 | Sensitive | None | ERR4812155 | Sensitive | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR4769421 | Other | La1.2 | None | ERR4769521 | HR-TB | None | ERR4797313 | HR-TB | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR6865502 | Sensitive | lineage4 | None | ERR6866807 | HR-TB | lineage4 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR736875 | HR-TB | lineage4 | None | ERR9117760 | HR-TB | lineage4.3 | None | ERR9117676 | Other | lineage4.2.2.2 | None | ERR9786705 | Sensitive | lineage4.1.2.1 | None | ERR9786346 | Sensitive | lineage4.3.4.2 | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR9786526 | Other | lineage4.8;lineage4.1 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR11349186 | MDR-TB | lineage4.3.3 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1175508 | Other | lineage4.9 | None | ERR9786843 | Other | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1183049 | Other | lineage2.2 | None | SRR12006550 | Other | lineage1.2.1.2 | None |
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