EBG00000313339 - n.625G>A
Drug resistance types
39 Sensitive
8 RR-TB
27 HR-TB
10 MDR-TB
2 Pre-XDR-TB
2 XDR-TB
64 Other
lineage Counts
| lineage | Count |
|---|---|
| La2;lineage2.2 | 1 |
| lineage2.2.1 | 10 |
| lineage4.9 | 77 |
| lineage4.9;lineage7 | 2 |
| lineage4.2.1 | 1 |
| lineage4 | 3 |
| lineage1;lineage4.9 | 1 |
| lineage4.1.2.1 | 3 |
| lineage4.8 | 4 |
| La1.7.1;lineage4.9 | 1 |
| lineage4.3.2.1 | 2 |
| lineage4.3.4.2 | 1 |
| lineage4.6.2.2 | 1 |
| lineage2.1;lineage4.9 | 2 |
| lineage4.1;lineage4.9 | 2 |
| La1.7;lineage3;lineage4.9;lineage7 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.3.3 | 3 |
| lineage4.6.3;lineage4.9 | 1 |
| 2 | |
| M.canetti;lineage2.2 | 2 |
| La1.7;lineage4.9 | 4 |
| lineage4.2.1.1;lineage4.3.3 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| La1.2 | 1 |
| La1.7;lineage4.9;lineage7 | 2 |
| La2;lineage4.9 | 1 |
| lineage3;lineage4 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage4.1;lineage4.8 | 2 |
| La1.2;La1.8.1 | 1 |
| La3;lineage4.3.4 | 1 |
| M.canetti;lineage1 | 1 |
| La3;lineage4.9 | 1 |
| lineage4.4.1.1 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.9;lineage9 | 1 |
| lineage6.1.3 | 1 |
| lineage3;lineage4.9 | 1 |
| lineage4.1.1.3;lineage4.9 | 2 |
| lineage4.3.4 | 1 |
| lineage2.2.1;lineage4 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage4.5 | 1 |
| lineage5.1.2 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 152 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | ERR363474 | Sensitive | lineage4.9 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | ERR363506 | Sensitive | lineage4.9 | None | ERR867524 | Pre-XDR-TB | lineage4.2.1 | None | ERR216965 | Sensitive | lineage4.9 | None | ERR349265 | Other | lineage4.9 | None | ERR363426 | Sensitive | lineage4.9 | None | ERR400345 | Other | lineage4.9 | None | ERR6865502 | Sensitive | lineage4 | None | SRR11662694 | Other | lineage4.9 | None | SRR3675548 | Sensitive | lineage4.9 | None | ERR176778 | HR-TB | lineage4.9 | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR400326 | Other | lineage4.9 | None | ERR363498 | Other | lineage4.9 | None | ERR176779 | HR-TB | lineage4.9 | None | SRR6045706 | Other | lineage4.9 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR12015084 | Other | lineage4.8 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | ERR4812155 | Other | lineage4.9 | None | ERR363445 | Other | lineage4.9 | None | ERR363509 | Sensitive | lineage4.9 | None | ERR4797313 | Sensitive | lineage2.2.1 | None | ERR4178226 | Sensitive | lineage4 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | ERR363453 | Other | lineage4.9 | None | ERR473332 | Other | lineage4.9 | None | SRR10808730 | Other | lineage4.9 | None | ERR9786346 | Sensitive | lineage4.3.4.2 | None | SRR1180137 | RR-TB | lineage2.2.1 | None | SRR11342676 | HR-TB | lineage4.6.2.2 | None | ERR1035138 | MDR-TB | lineage2.1;lineage4.9 | None | ERR373947 | Other | lineage4.9 | None | ERR4798431 | Other | lineage4.1;lineage4.9 | None | SRR5341315 | Other | La1.7;lineage3;lineage4.9;lineage7 | None | ERR2517475 | Other | lineage4 | None | ERR363500 | Other | lineage4.9 | None | SRR3675260 | Sensitive | lineage4.9 | None | SRR12708371 | HR-TB | lineage4.1.1.3 | None | SRR12708419 | Other | lineage4.3.3 | None | ERR363479 | Other | lineage4.9 | None | ERR349266 | Other | lineage4.9 | None | ERR161037 | HR-TB | lineage4.9 | None | ERR369159 | Other | lineage4.9 | None | ERR181824 | MDR-TB | lineage4.9 | None | ERR11252558 | Other | lineage4.6.3;lineage4.9 | None | ERR9786843 | Other | None | SRR5341373 | Other | lineage4.9 | None | ERR7911670 | XDR-TB | M.canetti;lineage2.2 | None | ERR363449 | Other | lineage4.9 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | ERR867542 | HR-TB | lineage4.2.1.1;lineage4.3.3 | None | SRR3675555 | MDR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR7070320 | Other | lineage4.8 | None | ERR4769421 | Other | La1.2 | None | SRR20632814 | Sensitive | lineage4.9 | None | SRR7069347 | Other | lineage4.1.2.1 | None | ERR363499 | Other | lineage4.9 | None | ERR369158 | Other | lineage4.9 | None | ERR12015085 | Other | lineage4.8 | None | ERR363421 | Other | lineage4.9 | None | ERR4799547 | HR-TB | lineage2.2.1 | None | SRR5341313 | Other | La1.7;lineage4.9;lineage7 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | SRR3675230 | Other | lineage3;lineage4 | None | ERR736839 | HR-TB | M.canetti;lineage4.9 | None | SRR3675495 | RR-TB | lineage2.1;lineage4.9 | None | ERR9786526 | Other | lineage4.1;lineage4.8 | None | ERR373946 | Other | lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | SRR7240033 | Other | La1.2;La1.8.1 | None | ERR161039 | HR-TB | La3;lineage4.3.4 | None | SRR3675582 | Other | lineage4.9 | None | ERR400336 | Sensitive | lineage4.9 | None | ERR4811030 | Other | lineage4.9 | None | SRR15014655 | Other | M.canetti;lineage1 | None | ERR349299 | Other | lineage4.9 | None | ERR349264 | Other | lineage4.9 | None | ERR867572 | Other | lineage4.9 | None | SRR3675318 | Other | lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None | SRR6045371 | Other | lineage4.9 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | SRR12708398 | Sensitive | lineage4.4.1.1 | None | SRR26399321 | Sensitive | lineage1.1.1.1 | None | SRR18002967 | HR-TB | lineage2.2.1 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | ERR363490 | Other | lineage4.9 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR363447 | Other | lineage4.9 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | ERR1023236 | Other | lineage6.1.3 | None | SRR12708374 | Sensitive | lineage4.1;lineage4.9 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | SRR5341396 | Other | lineage3;lineage4.9 | None | SRR1175507 | Sensitive | lineage4.1.1.3;lineage4.9 | None | ERR363446 | Other | lineage4.9 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR11252664 | Other | lineage2.2.1 | None | SRR12708416 | Sensitive | None | ERR349300 | Other | lineage4.9 | None | ERR6866807 | RR-TB | lineage4.9 | None | ERR369162 | Other | lineage4.9 | None | SRR6046611 | Sensitive | lineage4.9 | None | ERR176651 | Other | lineage4.9 | None | ERR373945 | Other | lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | SRR3675539 | MDR-TB | lineage4.9;lineage7 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | ERR400320 | Sensitive | lineage4.9 | None | ERR502943 | Sensitive | lineage2.2.1;lineage4 | None | SRR18002933 | Other | lineage2.2.1 | None | ERR349296 | Sensitive | lineage4.9 | None | ERR12015086 | RR-TB | lineage4.8 | None | ERR387051 | RR-TB | lineage4.9 | None | SRR5341422 | HR-TB | La1.7;lineage4.9;lineage7 | None | ERR369163 | Other | lineage4.9 | None | SRR3675210 | Sensitive | lineage4.9 | None | ERR181887 | Other | lineage4.9 | None | ERR349330 | Sensitive | lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | SRR1175508 | Sensitive | lineage4.9 | None | ERR4811031 | Other | lineage4.5 | None | SRR5341323 | Sensitive | lineage4.9 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR9786525 | RR-TB | lineage4.1;lineage4.8 | None | ERR1063858 | HR-TB | lineage4.9 | None | SRR12708409 | HR-TB | lineage4.3.3 | None | SRR5341296 | Sensitive | lineage4.9 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR363502 | Other | lineage4.9 | None | SRR12708372 | Sensitive | lineage4.9 | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | ERR400538 | RR-TB | lineage5.1.2 | None | SRR11349186 | MDR-TB | lineage4.3.3 | None | ERR212125 | HR-TB | lineage4.9 | None | SRR2010299 | MDR-TB | lineage2.2.1 | None | ERR4831545 | XDR-TB | M.canetti;lineage2.2 | None | SRR6045503 | Other | lineage4.9 | None | SRR3675209 | Sensitive | lineage4.9 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR363456 | Sensitive | lineage4.9 | None | SRR1175500 | Sensitive | lineage4.1.1.3;lineage4.9 | None | SRR9971114 | Other | lineage2.2.1 | None | ERR2513082 | Other | lineage4.1.2.1 | gb |
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