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SRA data
Rv0001
- c.909A>G
Drug resistance types
5 Sensitive
3 RR-TB
19 HR-TB
9 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
11 Other
lineage Counts
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lineage
Count
lineage
Count
lineage4.9
7
lineage2.2.1
4
lineage4.2;lineage4.9
2
2
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
2
La1.7;lineage4.9
2
M.canetti;lineage2.2.2;lineage6.2
2
lineage3
2
lineage4.2;lineage4.8.1;lineage4.9
2
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3
1
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spoligotype Counts
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spoligotype
Count
spoligotype
Count
None
47
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Geographic prevalence
Country level data for this variant is available for 0 isolates.
+
−
Variant Proportion
Hover over a Country
0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
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Statisctical support
Not enough data to calculate support.
Samples
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ID
Drug resistance
Lineage
Country iso2
ID
Drug resistance
Lineage
Country iso2
ERR1063856
HR-TB
M.canetti;lineage4.9;lineage9
None
ERR1063859
HR-TB
La1.7.1;lineage4.9
None
ERR108471
HR-TB
lineage4.9
None
ERR11252736
Other
lineage4.9
None
ERR13285068
Sensitive
lineage4.9
None
ERR1873492
HR-TB
M.canetti;lineage2.2.2;lineage6.2
None
ERR2026695
MDR-TB
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3
None
ERR2026696
MDR-TB
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3
None
ERR2026697
HR-TB
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
None
ERR2026698
HR-TB
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3
None
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