Rv0006 - c.-188C>G


Drug resistance types
5 Sensitive 6 RR-TB 46 HR-TB 11 MDR-TB 2 Pre-XDR-TB 0 XDR-TB 39 Other
lineage Counts
lineage Count
lineage4.2;lineage4.9 2
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La1.7.X-unk4;lineage4.9 1
lineage4.9 56
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
lineage2.2.1 2
lineage1;lineage4.9 1
lineage2.1;lineage4.9;lineage6.3 1
La3;lineage4.3.4 1
M.canetti;lineage1 1
lineage4.9;lineage7 3
La1.8.1 1
La1.7;lineage4.9 3
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
La1.7.1;La1.7.X-unk4;lineage7 1
lineage4.9;lineage9 1
lineage4.2;lineage4.8.1;lineage4.9 1
lineage2.1;lineage4.9;lineage7 1
lineage4.3.4 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage4.8 2
M.canetti;lineage4.9 3
lineage2.1;lineage4.1.4;lineage4.9 1
M.canetti;lineage4.2;lineage4.9 1
La3;lineage4.9 1
La1.7.1;lineage4.9 1
lineage2.1;lineage4.9 2
lineage6.1.3 1
M.canetti;lineage4.9;lineage9 1
lineage4 2
La1.7;M.canetti;lineage4.9 3
lineage2.2.1.1 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 1
La1.7.1;La1.7.X-unk4 1
lineage4.6.3;lineage4.9 1
lineage2.2 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
lineage1.1.1 1
lineage2.2.1;lineage4.8.1 1
spoligotype Counts
spoligotype Count
None 109
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6046295 MDR-TB lineage4.2;lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR926165 Other lineage4.9 None
ERR926156 Other lineage4.9 None
ERR387051 RR-TB lineage4.9 None
ERR926154 Sensitive lineage4.9 None
ERR3283024 HR-TB La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
SRR6045555 Other lineage4.9 None
ERR181887 Other lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR323045 HR-TB lineage1;lineage4.9 None
SRR23961558 RR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR161039 HR-TB La3;lineage4.3.4 None
ERR926160 Other lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
ERR4815441 HR-TB lineage4.9 None
ERR3445502 HR-TB lineage4.9;lineage7 None
ERR3797073 Other La1.8.1 None
ERR4817731 HR-TB lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR926164 Other lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
SRR6046720 HR-TB lineage4.9;lineage9 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR3283018 HR-TB lineage4.9 None
ERR161037 HR-TB lineage4.9 None
ERR3797029 Other lineage4.9 None
ERR176651 Other lineage4.9 None
SRR3675555 MDR-TB lineage2.1;lineage4.9;lineage7 None
ERR736817 HR-TB lineage4.3.4 None
SRR6046046 Other lineage4.9 None
ERR4818929 HR-TB lineage4.9 None
ERR4820773 HR-TB lineage4.9 None
ERR4816466 HR-TB lineage4.9 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
SRR6044942 HR-TB lineage4.9 None
ERR926162 Sensitive lineage4.9 None
SRR6045548 Other lineage4.9 None
ERR2026698 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR4799025 Other lineage4.8 None
SRR6046133 HR-TB lineage4.9 None
SRR6045219 HR-TB lineage4.9 None
SRR6045399 Other M.canetti;lineage4.9 None
ERR176778 HR-TB lineage4.9 None
SRR3675582 Other lineage4.9 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR736875 HR-TB lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR176779 HR-TB lineage4.9 None
ERR181744 HR-TB La3;lineage4.9 None
ERR926159 Sensitive lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
ERR4819877 HR-TB lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR3283042 HR-TB lineage4.9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
ERR1023236 Other lineage6.1.3 None
ERR6359082 Other lineage4.9 None
ERR926155 Other lineage4.9 None
SRR6045233 Other M.canetti;lineage4.9 None
SRR11662690 HR-TB lineage4.9 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
ERR926161 Sensitive lineage4.9 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
SRR6045053 Other lineage4 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
ERR2514327 HR-TB lineage4.8 None
SRR3675539 MDR-TB lineage4.9;lineage7 None
SRR6079962 HR-TB lineage2.2.1.1 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
ERR736848 Other lineage4.9 None
ERR926157 Other lineage4.9 None
SRR14782054 Other lineage4.9 None
SRR3675495 RR-TB lineage2.1;lineage4.9 None
SRR6045347 Other lineage4.9 None
SRR6046593 Other lineage4.9 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
ERR926158 Sensitive lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
SRR6046382 RR-TB lineage2.2.1 None
ERR4799513 HR-TB lineage2.2 None
ERR926163 Other lineage4.9 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
ERR4816478 HR-TB lineage4 None
SRR14066533 RR-TB lineage1.1.1 None
ERR4816656 Other lineage4.9 None
SRR14782405 HR-TB lineage4.9 None
ERR473332 Other lineage4.9 None
ERR10748114 Pre-XDR-TB lineage2.2.1;lineage4.8.1 None
ERR4769452 Other lineage4.9 None
ERR4769450 Other lineage4.9 None
ERR212125 HR-TB lineage4.9 None
ERR216938 HR-TB La1.7;lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
SRR6046485 Other lineage4.9 None
ERR2026697 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR971389 Other lineage4.9 None