Rv2245 - c.106C>T


Drug resistance types
1 Sensitive 9 RR-TB 65 HR-TB 26 MDR-TB 3 Pre-XDR-TB 2 XDR-TB 87 Other
lineage Counts
lineage Count
lineage2.1;lineage4.1.4;lineage4.9 1
M.canetti;lineage4.2;lineage4.9 1
lineage4.9;lineage6.3 5
lineage4.9;lineage7 2
La2;lineage4.9;lineage9 1
lineage4.3.3 1
lineage4.9 36
lineage4 1
lineage2.2.1 6
La3;lineage4.9 6
lineage4.9;lineage9 3
lineage2.1;lineage4.9 8
lineage2.1 4
lineage2.1;lineage4.9;lineage6.3 6
La3 2
La3;lineage2.2.1 1
La1.7;lineage3;lineage4.9;lineage7 1
lineage4.6.3;lineage4.9;lineage6.3 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
La1.7;lineage4.9 7
14
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
lineage2.1;lineage6.3 2
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.8 2
lineage4.2;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 1
La3;M.canetti;lineage2.2.1 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
La1.6;La3;lineage4.9 1
lineage4.6.1.1 1
lineage2.2.1;lineage6.3 1
lineage4.4.1.1 1
La1.7;M.canetti;lineage4.9 3
lineage2.1;lineage4.3.2;lineage4.9 1
lineage4.1.2.1 2
lineage4.6.2.2 4
lineage4.1.1.1 1
lineage4.3.2;lineage4.9 1
La1.7 1
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La3;lineage2 1
lineage1.2.2.2 1
La3;lineage2.1;lineage4.9 3
M.canetti;lineage2.1;lineage6.3 1
M.canetti;lineage2.2.2;lineage6.2 2
lineage4.2;lineage4.8.1;lineage4.9 2
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
M.canetti;lineage2.2 2
M.canetti;lineage4.9 4
La1.2.BCG 1
lineage2.2 1
La1.7.X-unk4;lineage4.9 1
lineage4.7 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 1
lineage3 1
La1.7;lineage4.9;lineage7 3
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
lineage4.3.2.1 1
lineage3.1 1
La3;lineage2.1;lineage4.9;lineage6.3 3
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 4
La2;lineage4.9 1
M.canetti;lineage2.1;lineage4.9 2
lineage1.1.1 1
La1.7.1;La1.7.X-unk4;lineage7 1
lineage4.1.2 1
lineage4.6.3;lineage4.9 1
La3;lineage2.1;lineage6.3 1
La3;lineage4.8 1
lineage4.3.4.2.1 2
lineage4.9.1 1
La3;lineage3 1
La1.6;La3;lineage4.6.4;lineage4.9 1
lineage3.1.2.1;lineage3.1.2.2 1
La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage3.1.2.2 1
La3;lineage4.3.4 1
spoligotype Counts
spoligotype Count
None 193
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
ERR212121 HR-TB lineage4.9;lineage6.3 None
ERR3445502 HR-TB lineage4.9;lineage7 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
SRR1184298 Pre-XDR-TB lineage4.3.3 None
ERR4817731 HR-TB lineage4.9 None
ERR4816478 HR-TB lineage4 None
ERR4814352 Other lineage2.2.1 None
ERR4816656 Other lineage4.9 None
ERR4819781 Other lineage2.2.1 None
SRR1165628 Other La3;lineage4.9 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR1196546 Other lineage4.9 None
SRR6046720 HR-TB lineage4.9;lineage9 None
ERR1035138 MDR-TB lineage2.1;lineage4.9 None
SRR3416776 Other lineage2.1 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR1172817 Other La3 None
SRR26937071 MDR-TB La3;lineage2.2.1 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
SRR3675574 Other lineage4.6.3;lineage4.9;lineage6.3 None
ERR3283018 HR-TB lineage4.9 None
ERR736863 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR176560 HR-TB La1.7;lineage4.9 None
SRR1184381 MDR-TB None
ERR4815604 Other None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR1184380 Other lineage2.1;lineage4.9 None
ERR2514327 HR-TB lineage4.8 None
SRR6046295 MDR-TB lineage4.2;lineage4.9 None
ERR3797044 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 None
SRR3742657 Pre-XDR-TB La3;M.canetti;lineage2.2.1 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR3675492 Other La1.7;lineage4.9 None
ERR702406 Other lineage2.1 None
ERR3797061 Other La1.6;La3;lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
ERR6358755 Other lineage4.6.1.1 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
SRR6046133 HR-TB lineage4.9 None
SRR1169306 Other La3;lineage4.9 None
ERR176643 Other La3;lineage4.9 None
SRR28119811 Other lineage2.2.1;lineage6.3 None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR6046783 Other La1.7;M.canetti;lineage4.9 None
SRR23961558 RR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR6045327 Other lineage2.1;lineage4.3.2;lineage4.9 None
ERR4820854 Other lineage4.1.2.1 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR176793 Other lineage4.1.1.1 None
ERR736865 MDR-TB lineage4.3.2;lineage4.9 None
ERR181744 HR-TB La3;lineage4.9 None
SRR1172951 Other lineage4.9 None
SRR1165699 Other lineage4.9 None
ERR4819877 HR-TB lineage4.9 None
ERR3801503 Other lineage4.6.2.2 None
ERR323108 HR-TB La1.7;lineage4.9 None
SRR1172728 RR-TB La3 None
SRR8217918 HR-TB lineage4.9 None
ERR4830353 HR-TB La1.7 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
SRR1172234 Other lineage4.9 None
SRR20969677 HR-TB La3;lineage2 None
SRR10808730 Other lineage4.9 None
ERR4797201 Other lineage1.2.2.2 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
SRR1180137 RR-TB lineage2.2.1 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR9786711 Other lineage4.6.2.2 None
ERR294266 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR216938 HR-TB La1.7;lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
SRR6046594 Other lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR6045233 Other M.canetti;lineage4.9 None
ERR4811493 HR-TB lineage4.9 None
SRR28119756 Other lineage4.9;lineage6.3 None
ERR4818615 Sensitive None
ERR9786843 Other None
SRR1184372 MDR-TB None
SRR7535086 Other None
ERR987722 MDR-TB None
ERR212001 HR-TB None
ERR4816999 Other None
SRR1196768 MDR-TB None
SRR1196583 Other lineage4.9 None
ERR1035157 Other lineage4.9 None
ERR4798262 HR-TB La1.2.BCG None
SRR3675449 RR-TB M.canetti;lineage4.9 None
ERR502908 HR-TB lineage2.2.1 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
SRR1710057 Other lineage2.1 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR1184388 Other lineage2.1;lineage4.9 None
ERR212033 Other lineage4.9 None
SRR1183049 RR-TB lineage2.2 None
SRR3675520 Other La1.7.X-unk4;lineage4.9 None
ERR4819932 Other lineage4.7 None
ERR4820773 HR-TB lineage4.9 None
SRR3675501 Other La1.7;lineage4.9 None
SRR1173633 Other lineage4.9 None
SRR6044942 HR-TB lineage4.9 None
SRR1172310 MDR-TB lineage4.9 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR3283024 HR-TB La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 None
ERR990545 RR-TB lineage3 None
SRR5341313 Other La1.7;lineage4.9;lineage7 None
SRR6046644 MDR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
SRR12708407 HR-TB lineage4.3.2.1 None
SRR6045526 Other lineage4.9 None
ERR736839 HR-TB M.canetti;lineage4.9 None
SRR1173778 Other lineage4.9 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR502912 Other lineage2.2.1 None
SRR6045219 HR-TB lineage4.9 None
ERR9119525 MDR-TB lineage4.6.2.2 None
SRR3675267 Other La1.7;lineage4.9 None
SRR1184346 HR-TB lineage3.1 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR6046196 Other La1.7;M.canetti;lineage4.9 None
ERR502524 MDR-TB lineage4.9;lineage6.3 None
ERR4815441 HR-TB lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR1184294 Other lineage4.9 None
ERR176751 HR-TB lineage4.9 None
SRR5341432 Other La1.7;lineage4.9;lineage7 None
ERR323039 MDR-TB La2;lineage4.9 None
SRR1183111 HR-TB lineage4.9 None
ERR3797028 HR-TB M.canetti;lineage4.9 None
ERR736859 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR3283042 HR-TB lineage4.9 None
SRR14066533 RR-TB lineage1.1.1 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR4818347 Other lineage4.1.2 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR2229542 Other lineage4.8 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR4819241 Other lineage4.9 None
SRR3675505 Other La1.7;M.canetti;lineage4.9 None
ERR4800527 MDR-TB lineage2.2.1 None
SRR7131023 Other lineage4.1.2.1 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR161037 HR-TB lineage4.9 None
SRR1175074 Other None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
ERR11252612 Other La3;lineage4.9 None
ERR234659 HR-TB None
ERR2514692 Other None
SRR1172857 Other None
SRR28119805 Other lineage4.9 None
ERR4810741 HR-TB La3;lineage2.1;lineage6.3 None
SRR5341373 Other lineage4.9 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR212034 HR-TB La1.7;lineage4.9 None
ERR4817893 Other La3;lineage4.8 None
ERR161034 HR-TB lineage4.3.4.2.1 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
SRR1173629 Other lineage2.1;lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR4818929 HR-TB lineage4.9 None
ERR245758 Other lineage4.9.1 None
ERR2693245 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR176549 Other lineage4.3.4.2.1 None
SRR1167384 Other La3;lineage4.9 None
ERR1023302 MDR-TB La3;lineage3 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
ERR2693231 HR-TB La1.6;La3;lineage4.6.4;lineage4.9 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
ERR987729 MDR-TB lineage3.1.2.1;lineage3.1.2.2 None
SRR5341333 HR-TB lineage2.1;lineage4.9 None
SRR3675234 HR-TB La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR3797014 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR6046397 RR-TB M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
ERR323043 Other lineage2.1;lineage4.9 None
SRR1173400 Other lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR161039 HR-TB La3;lineage4.3.4 None
SRR5341470 MDR-TB lineage4.9;lineage9 None