Rv2245 - c.106C>T
Drug resistance types
10 Sensitive
2 RR-TB
103 HR-TB
15 MDR-TB
6 Pre-XDR-TB
0 XDR-TB
78 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3 | 2 |
| lineage2.2.1 | 9 |
| 125 | |
| lineage4.6.1.1 | 2 |
| La1.2 | 1 |
| lineage1.2.2.1 | 1 |
| lineage2.2 | 5 |
| lineage4.6.2.2 | 4 |
| lineage4.1.2.1 | 3 |
| lineage4.9 | 12 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage4 | 13 |
| La3 | 1 |
| lineage4.4.1.1 | 2 |
| lineage4.3.3 | 2 |
| lineage3.1 | 2 |
| lineage2 | 3 |
| La1.7.1 | 1 |
| lineage1.1.1 | 1 |
| lineage2.1 | 3 |
| lineage4.5 | 1 |
| lineage4.8 | 3 |
| lineage4.3.4.2.1 | 2 |
| lineage4.1.1 | 1 |
| lineage4.3.4 | 1 |
| lineage4.3 | 1 |
| lineage4.8;La3 | 1 |
| La1.8.1 | 1 |
| lineage4.9.1 | 1 |
| lineage4.1.2 | 1 |
| lineage4;lineage1.1 | 1 |
| lineage4.7 | 1 |
| lineage1.1.2 | 1 |
| La2 | 1 |
| lineage3;La3 | 1 |
| lineage3.1.2 | 1 |
| lineage1.2.2.2 | 1 |
| La1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 214 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4800341 | Other | lineage3 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR4810741 | HR-TB | None | ERR4811493 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4811105 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR6359045 | HR-TB | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR6358991 | HR-TB | None | ERR5336148 | Other | None | ERR6198317 | Other | La1.2 | None | ERR736839 | Other | None | ERR702404 | HR-TB | None | ERR702406 | HR-TB | None | ERR7821210 | Sensitive | lineage1.2.2.1 | None | ERR736865 | HR-TB | None | ERR736867 | HR-TB | None | ERR736874 | HR-TB | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR9117709 | HR-TB | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9786682 | Other | lineage4.1.2.1 | None | SRR1172214 | HR-TB | lineage4.9 | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | SRR1167384 | Other | lineage4 | None | SRR1169249 | Other | La3 | None | SRR1169306 | Other | None | ERR9786843 | Other | None | ERR987722 | HR-TB | None | ERR987733 | RR-TB | lineage4.6.1.1 | None | ERR990545 | Other | lineage3 | None | SRR1169194 | Other | None | SRR1172146 | Sensitive | lineage4.9 | None | SRR1172234 | Other | None | SRR1172728 | MDR-TB | None | SRR1172310 | HR-TB | None | SRR1172951 | Other | None | SRR1172817 | HR-TB | None | SRR1172844 | MDR-TB | lineage4.4.1.1 | None | SRR1172857 | MDR-TB | None | SRR1173153 | HR-TB | None | SRR1173118 | Other | None | SRR1173363 | HR-TB | None | SRR1173384 | Other | lineage4 | None | SRR1173400 | Other | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173484 | Other | lineage4 | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173778 | Other | None | SRR1173629 | Other | None | SRR1173706 | Other | lineage4.9 | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR1174897 | HR-TB | None | SRR1175049 | RR-TB | None | SRR1175074 | MDR-TB | None | SRR1175090 | Other | lineage4.9 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1183049 | Other | lineage2.2 | None | SRR1184294 | HR-TB | None | SRR1173788 | Other | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1196546 | HR-TB | None | SRR1184372 | MDR-TB | None | SRR1184388 | Other | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1196494 | MDR-TB | None | SRR1184381 | MDR-TB | None | SRR1184380 | HR-TB | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR1196566 | HR-TB | None | SRR12142341 | HR-TB | None | SRR1196677 | HR-TB | lineage2 | None | SRR1196768 | MDR-TB | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR14066533 | Sensitive | lineage1.1.1 | None | SRR1710057 | Other | lineage2.1 | None | SRR12416824 | HR-TB | None | SRR15368973 | Other | None | SRR19304036 | HR-TB | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR19303884 | HR-TB | None | ERR4815604 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | ERR11081257 | Other | lineage4.8 | None | ERR161034 | Other | lineage4.3.4.2.1 | None | ERR176793 | Other | lineage4.1.1 | None | SRR3675465 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR3675488 | HR-TB | None | ERR161039 | Sensitive | lineage4.3.4 | None | SRR3675221 | HR-TB | None | SRR3416776 | Other | lineage2.1 | None | ERR181744 | HR-TB | None | ERR176643 | HR-TB | None | SRR3675222 | Other | None | SRR3675236 | HR-TB | None | SRR3675501 | HR-TB | None | ERR176549 | Other | lineage4.3.4.2.1 | None | SRR3675234 | Other | None | ERR176568 | Other | lineage4.3 | None | ERR2229542 | Other | lineage4.8 | None | SRR3675311 | Other | None | ERR176751 | HR-TB | None | SRR3675510 | Other | None | SRR3675312 | HR-TB | lineage4 | None | ERR176740 | HR-TB | None | ERR212001 | HR-TB | None | ERR4816999 | Other | None | ERR2027263 | Other | lineage4 | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR212033 | HR-TB | None | SRR3675572 | Other | None | SRR3675574 | HR-TB | None | ERR212121 | HR-TB | None | SRR3675571 | HR-TB | None | ERR212034 | HR-TB | None | ERR212123 | Other | None | ERR4817385 | Sensitive | lineage4.9 | None | ERR4816466 | HR-TB | None | ERR4816585 | Other | lineage2.2 | None | SRR3742665 | HR-TB | None | ERR4816656 | HR-TB | None | ERR502912 | Other | lineage2.2.1 | None | ERR4817893 | Other | lineage4.8;La3 | None | ERR4818021 | Other | La1.8.1 | None | ERR234659 | HR-TB | None | ERR245758 | Other | lineage4.9.1 | None | ERR4818607 | Sensitive | lineage4.9 | None | ERR4818929 | HR-TB | None | ERR4818347 | Other | lineage4.1.2 | None | SRR5341400 | HR-TB | lineage4 | None | ERR4818615 | Other | None | SRR5341373 | HR-TB | lineage4 | None | ERR4819322 | Other | lineage4;lineage1.1 | None | SRR5341293 | HR-TB | lineage4 | None | ERR4820854 | Other | lineage4.1.2.1 | None | ERR2514327 | HR-TB | lineage4.8 | None | SRR5341432 | HR-TB | lineage4 | None | ERR1035138 | MDR-TB | None | ERR4819781 | Other | lineage2.2.1 | None | SRR5341302 | HR-TB | None | ERR2514692 | Other | None | SRR5341315 | Sensitive | None | ERR4819932 | Other | lineage4.7 | None | SRR5341313 | HR-TB | None | ERR2693231 | Other | None | SRR5341333 | HR-TB | None | ERR2693254 | Other | None | SRR5341470 | HR-TB | None | ERR2693230 | Other | None | SRR6045503 | HR-TB | None | ERR2693257 | Other | None | ERR4821631 | Other | lineage1.1.2 | None | SRR6045526 | HR-TB | None | SRR6045519 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6045233 | HR-TB | None | SRR6044790 | HR-TB | None | SRR6044890 | Other | lineage4.9 | None | SRR6045327 | HR-TB | None | SRR6046397 | Other | None | SRR6045399 | Other | None | SRR6046305 | Other | lineage4.9 | None | SRR6046066 | HR-TB | None | SRR6046225 | HR-TB | None | SRR6046644 | HR-TB | None | SRR6046540 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | ERR4830353 | Other | None | SRR8217918 | HR-TB | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR502524 | HR-TB | La2 | None | ERR4831117 | HR-TB | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR294266 | HR-TB | None | ERR502532 | HR-TB | None | ERR502908 | HR-TB | lineage2.2.1 | None | SRR7131023 | Other | lineage4.1.2.1 | None | SRR7535086 | Other | None | SRR7496509 | Other | None | ERR323108 | HR-TB | lineage4 | None | ERR323039 | HR-TB | None | ERR323043 | HR-TB | None | ERR323053 | HR-TB | None | ERR3283027 | HR-TB | None | ERR1023302 | MDR-TB | lineage3;La3 | None | ERR1035157 | Other | lineage4.9 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3283024 | Other | None | ERR3445502 | HR-TB | lineage4 | None | ERR3283032 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3445501 | HR-TB | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR3797010 | Sensitive | lineage4.9 | None | ERR3797017 | Other | None | ERR3797036 | HR-TB | None | ERR3797069 | Other | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4797201 | Other | lineage1.2.2.2 | None | ERR3797014 | Other | None | ERR3797043 | HR-TB | None | ERR3797044 | Other | None | ERR3797061 | Other | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR4798262 | HR-TB | La1 | None |
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