Rv0006 - c.2068C>T
Drug resistance types
9 Sensitive
5 RR-TB
19 HR-TB
10 MDR-TB
1 Pre-XDR-TB
0 XDR-TB
8 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 13 |
| La3;lineage4.9 | 1 |
| lineage1.1.3.1 | 17 |
| lineage4.3.1;lineage4.9;lineage6 | 1 |
| lineage4.9;lineage7 | 3 |
| lineage4.9;lineage9 | 1 |
| lineage4.4.1.2 | 1 |
| La1.7;lineage4.9 | 4 |
| lineage4.3.4 | 1 |
| lineage2.1;lineage4.9 | 1 |
| La1.7.1 | 1 |
| La1.7.1;lineage4.9 | 1 |
| M.canetti;lineage4.9 | 2 |
| M.canetti;lineage4.9;lineage9 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| lineage1;lineage4.9 | 1 |
| La1.7.1;La1.7.X-unk4 | 1 |
| M.canetti;lineage1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 52 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR736875 | HR-TB | lineage4.9 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | ERR7737951 | MDR-TB | lineage1.1.3.1 | None | SRR6046299 | Other | lineage4.3.1;lineage4.9;lineage6 | None | SRR3675456 | RR-TB | lineage4.9;lineage7 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | SRR5341456 | Other | lineage4.9 | None | ERR161037 | HR-TB | lineage4.9 | None | ERR176651 | Other | lineage4.9 | None | ERR736817 | HR-TB | lineage4.3.4 | None | SRR18693877 | Sensitive | lineage1.1.3.1 | None | SRR3675539 | MDR-TB | lineage4.9;lineage7 | None | SRR18693873 | Sensitive | lineage1.1.3.1 | None | SRR18693885 | Sensitive | lineage1.1.3.1 | None | SRR3675495 | RR-TB | lineage2.1;lineage4.9 | None | SRR18693876 | Sensitive | lineage1.1.3.1 | None | SRR3675461 | RR-TB | lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | ERR212125 | HR-TB | lineage4.9 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR11252550 | Sensitive | lineage1.1.3.1 | None | ERR11489060 | MDR-TB | lineage1.1.3.1 | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | SRR18693862 | Sensitive | lineage1.1.3.1 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | ERR181887 | Other | lineage4.9 | None | ERR11488796 | Pre-XDR-TB | lineage1.1.3.1 | None | ERR11488774 | MDR-TB | lineage1.1.3.1 | None | SRR18693861 | Sensitive | lineage1.1.3.1 | None | ERR176779 | HR-TB | lineage4.9 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | SRR6044835 | Other | lineage4.9 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | ERR8479578 | HR-TB | lineage1.1.3.1 | None | SRR3675441 | RR-TB | lineage4.9 | None | ERR8479577 | Sensitive | lineage1.1.3.1 | None | SRR3675449 | RR-TB | M.canetti;lineage4.9 | None | ERR11488445 | MDR-TB | lineage1.1.3.1 | None | SRR3675555 | MDR-TB | lineage2.1;lineage4.9;lineage7 | None | SRR18693872 | MDR-TB | lineage1.1.3.1 | None | SRR18693892 | Sensitive | lineage1.1.3.1 | None | ERR11488379 | MDR-TB | lineage1.1.3.1 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR323045 | HR-TB | lineage1;lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | SRR3675582 | Other | lineage4.9 | None | SRR15014655 | Other | M.canetti;lineage1 | None |
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