Rv0006 - c.424C>T


Drug resistance types
24 Sensitive 2 RR-TB 29 HR-TB 15 MDR-TB 1 Pre-XDR-TB 0 XDR-TB 87 Other
lineage Counts
lineage Count
La3;lineage4.9 5
lineage1.1.3.1 1
16
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage4.9;lineage6.3 7
lineage2.1;lineage4.9;lineage6.3 6
lineage2.2.1 4
lineage4.9 42
lineage2.1 2
lineage2.1;lineage4.9 10
lineage4.4.1.1 2
lineage4.6.2.2 1
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.8 2
lineage4.1.2.1 9
La1.2.BCG;La1.8.1 1
lineage1.1.2 3
La3;lineage2.1;lineage4.9 3
lineage4.7 1
La3;lineage1.1.2 1
La1.6;La3;lineage4.6.4;lineage4.9 1
lineage4.9;lineage9 2
La1.7;lineage3.1;lineage4 1
La1.6;La3;M.canetti;lineage2.1;lineage4.9 1
lineage4.1.1.1 1
lineage4 2
La2;lineage4.9;lineage9 1
La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 3
lineage4.2.1 1
lineage3 3
La1;lineage4.9 1
lineage2.1;lineage6.3 2
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
M.canetti;lineage2.1;lineage6.3 1
M.canetti;lineage4.2;lineage4.9 1
lineage4.6.1.1 1
lineage3.1.2.1;lineage3.1.2.2 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
La2;lineage4.9 1
lineage3.1.2.2 1
La1;lineage2;lineage4.9 1
lineage4.3.2 1
lineage4.1.3 2
lineage4.9;lineage7 1
La3;lineage2.1;lineage4.9;lineage6.3 2
lineage4.2;lineage4.9 1
lineage4.5 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage6.3.1 1
La1.7;lineage4.9 1
spoligotype Counts
spoligotype Count
None 158
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR176643 Other La3;lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR9117709 Other None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR7496509 Other None
ERR13265748 Other lineage4.9;lineage6.3 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR26937107 MDR-TB lineage2.2.1 None
SRR6045706 Sensitive lineage4.9 None
ERR4797054 Pre-XDR-TB lineage2.1 None
ERR323043 Other lineage2.1;lineage4.9 None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR1183111 HR-TB lineage4.9 None
ERR9786645 Other lineage4.6.2.2 None
SRR3675490 Other lineage2.1;lineage4.9;lineage6.3 None
SRR7496472 Other lineage4.9 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR9787197 Other None
ERR926156 Sensitive lineage4.9 None
ERR4819781 Other lineage2.2.1 None
ERR9786639 Sensitive lineage4.8 None
ERR13265528 Other lineage4.9;lineage6.3 None
ERR926155 Sensitive lineage4.9 None
ERR9786694 Other lineage4.1.2.1 None
ERR4407463 HR-TB None
ERR4818021 Other La1.2.BCG;La1.8.1 None
ERR9786569 Other lineage4.8 None
SRR22249523 HR-TB lineage1.1.2 None
ERR4811030 Sensitive lineage4.9 None
SRR18213713 HR-TB None
SRR28119717 Other lineage4.9;lineage6.3 None
ERR3283019 Other lineage2.1;lineage4.9 None
ERR736874 Other La3;lineage2.1;lineage4.9 None
ERR4819932 Other lineage4.7 None
ERR9117721 HR-TB La3;lineage1.1.2 None
ERR6866410 Sensitive lineage4.9 None
ERR2693231 Other La1.6;La3;lineage4.6.4;lineage4.9 None
ERR926162 Sensitive lineage4.9 None
ERR926160 Sensitive lineage4.9 None
ERR736856 Sensitive lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
SRR6046066 Other lineage4.9 None
SRR6046521 Other lineage4.4.1.1 None
SRR14801749 HR-TB lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
SRR6789626 Other None
ERR1063846 HR-TB lineage4.9 None
ERR3283020 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.9 None
SRR1184380 Other lineage2.1;lineage4.9 None
SRR6045371 Other lineage4.9 None
SRR3675236 Other None
ERR176793 Other lineage4.1.1.1 None
SRR3675524 Other lineage4.9;lineage6.3 None
ERR3283044 Other lineage4 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR926159 Sensitive lineage4.9 None
ERR2693230 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR1165699 Other lineage4.9 None
SRR7535086 Other None
SRR14802079 MDR-TB lineage4.2.1 None
ERR4800341 Other lineage3 None
ERR133825 HR-TB La1;lineage4.9 None
ERR926164 Other lineage4.9 None
ERR5336148 Other lineage2.1;lineage6.3 None
SRR29017461 Other La3;lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR502532 Other M.canetti;lineage2.1;lineage6.3 None
SRR6045892 Sensitive lineage4.9 None
ERR3797014 Other La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
SRR3675221 Other lineage4.9 None
ERR987722 MDR-TB None
ERR9786671 Other None
SRR29017571 MDR-TB lineage1.1.2 None
ERR9786604 Other None
SRR3675572 Other None
SRR5341333 Other lineage2.1;lineage4.9 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
SRR1196583 Other lineage4.9 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
ERR6358755 Other lineage4.6.1.1 None
ERR987729 HR-TB lineage3.1.2.1;lineage3.1.2.2 None
ERR11067320 Sensitive lineage4.1.2.1 None
SRR3675214 Other lineage4.9 None
SRR26399973 Other La3;lineage4.9 None
ERR9786682 Other lineage4.1.2.1 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
ERR9786627 Other lineage4.1.2.1 None
ERR323039 HR-TB La2;lineage4.9 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6044790 Other lineage2.1;lineage4.9 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR4798504 RR-TB lineage3 None
ERR067699 Sensitive La1;lineage2;lineage4.9 None
ERR926161 Sensitive lineage4.9 None
ERR400326 Other lineage4.9 None
ERR9117805 Other lineage4.3.2 None
SRR26159035 Sensitive lineage4.9 None
ERR926154 Sensitive lineage4.9 None
ERR702406 Other lineage2.1 None
ERR9786611 HR-TB lineage4.1.3 None
SRR3675581 Other lineage2.1;lineage4.9 None
ERR4831117 HR-TB lineage4.9;lineage7 None
SRR5341302 Other La3;lineage2.1;lineage4.9 None
ERR4798493 MDR-TB lineage2.2.1 None
SRR3675517 Other La3;lineage2.1;lineage4.9;lineage6.3 None
ERR779852 Sensitive lineage4.9 None
SRR3675311 Other lineage4.9 None
SRR1184294 Other lineage4.9 None
ERR3804155 Other lineage4.1.2.1 None
SRR7131023 Other lineage4.1.2.1 None
ERR3797070 Other lineage4.9 None
ERR9786642 Other lineage4.1.2.1 None
SRR1184381 MDR-TB None
ERR234659 Other None
ERR4814352 Other lineage2.2.1 None
ERR9786601 Other lineage4.1.2.1 None
SRR1180226 HR-TB lineage4.9 None
ERR926165 Sensitive lineage4.9 None
SRR1165667 Other lineage4.9;lineage6.3 None
SRR1167384 Other La3;lineage4.9 None
SRR6045380 Other lineage2.1;lineage4.9 None
SRR3675232 Other lineage4.1.2.1 None
SRR3675465 Other lineage4.9;lineage6.3 None
SRR6045242 Other lineage2.1;lineage4.9 None
ERR3283036 Other lineage2.1;lineage4.9 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
ERR926157 Sensitive lineage4.9 None
ERR3283027 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4553965 MDR-TB lineage1.1.2 None
ERR3797029 Other lineage4.9 None
SRR6046540 Other lineage2.1;lineage4.9 None
SRR1172310 HR-TB lineage4.9 None
SRR3675275 Other lineage4.9 None
ERR4811031 Sensitive lineage4.5 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR176568 HR-TB La3;lineage2.1;lineage4.9 None
ERR9787139 Other lineage6.3.1 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
SRR19303884 Other lineage2.1;lineage6.3 None
ERR3797017 HR-TB La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
ERR4811142 RR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
SRR7496517 Other None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
SRR1165628 Other La3;lineage4.9 None
ERR736848 Other lineage4.9 None
SRR3675467 Other lineage2.1;lineage4.9;lineage6.3 None
ERR4815604 Other None
ERR2027263 Other lineage4 None
SRR16156817 Other lineage4.9 None
ERR400345 Other lineage4.9 None
ERR926158 Sensitive lineage4.9 None
ERR4797588 MDR-TB lineage3 None
ERR216938 HR-TB La1.7;lineage4.9 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR926163 Other lineage4.9 None
ERR3804169 HR-TB lineage4.1.3 None
ERR971389 Sensitive lineage4.9 None