Rv1630 - c.1059G>C
Drug resistance types
15 Sensitive
3 RR-TB
19 HR-TB
4 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
26 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.3 | 2 |
| lineage4.1.2.1 | 2 |
| lineage3 | 5 |
| lineage2.2.1 | 7 |
| lineage2.2;lineage4.9 | 1 |
| lineage4.9 | 20 |
| lineage1.2.2.2 | 1 |
| lineage1.2.1.2 | 1 |
| M.canetti;lineage4.9 | 2 |
| lineage1.2.2.1;lineage4.4.1.1 | 2 |
| lineage4.3.4.2.1 | 2 |
| lineage2.2.1;lineage4.9 | 1 |
| La1.7;lineage4.9 | 3 |
| lineage4.4.1.1 | 1 |
| lineage1.1.1.1 | 1 |
| lineage4.3.2.1 | 2 |
| lineage4 | 2 |
| lineage4.9;lineage9 | 1 |
| La1.8.1 | 2 |
| lineage1.1.1 | 2 |
| lineage4.6.2.2 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
| La1.2 | 1 |
| lineage4.7 | 1 |
| lineage4.1.1.3 | 1 |
| La1.7.1 | 1 |
| La3;M.canetti;lineage4.9 | 1 |
| lineage4.8 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
| lineage2.2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 70 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR11349211 | Pre-XDR-TB | lineage4.3.3 | None | ERR4822138 | Other | lineage4.1.2.1 | None | ERR2513259 | Other | lineage3 | None | SRR12708415 | HR-TB | lineage2.2.1 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | ERR067712 | Sensitive | lineage4.9 | None | ERR4769433 | RR-TB | lineage4.9 | None | SRR3675245 | Other | lineage4.1.2.1 | None | ERR4816852 | Other | lineage4.9 | None | SRR12708411 | HR-TB | lineage1.2.2.2 | None | ERR4814639 | HR-TB | lineage4.9 | None | SRR20969475 | Other | lineage1.2.1.2 | None | ERR108471 | HR-TB | lineage4.9 | None | SRR3675449 | Other | M.canetti;lineage4.9 | None | SRR21677886 | Sensitive | lineage4.9 | None | SRR6045519 | MDR-TB | M.canetti;lineage4.9 | None | ERR11465711 | Other | lineage1.2.2.1;lineage4.4.1.1 | None | ERR11465511 | Other | lineage4.3.4.2.1 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | SRR12708414 | HR-TB | lineage2.2.1 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | SRR6045191 | Sensitive | lineage4.9 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | SRR12708418 | HR-TB | lineage2.2.1 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | SRR26399491 | Sensitive | lineage1.1.1.1 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | SRR3675461 | RR-TB | lineage4.9 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR4816470 | HR-TB | lineage3 | None | SRR7496471 | Sensitive | lineage4 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | ERR4596902 | MDR-TB | lineage3 | None | ERR4596910 | Sensitive | lineage4.9 | None | SRR6046250 | Other | lineage4.9 | None | SRR7236330 | Other | La1.8.1 | None | SRR3675441 | Other | lineage4.9 | None | ERR4817554 | Other | lineage1.1.1 | None | ERR473332 | Other | lineage4.9 | None | ERR9786528 | Sensitive | lineage4.6.2.2 | None | ERR11252558 | Other | lineage4.6.3;lineage4.9 | None | SRR20632814 | Sensitive | lineage4.9 | None | ERR4769418 | Other | La1.2 | None | SRR7496523 | Other | lineage4.7 | None | SRR12708396 | MDR-TB | lineage4.3.2.1 | None | SRR11462861 | Other | La1.8.1 | None | ERR4816322 | Other | lineage4.9 | None | SRR12708413 | HR-TB | lineage4.1.1.3 | None | SRR1792478 | HR-TB | La1.7.1 | None | ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR2446509 | Other | lineage3 | nl | SRR5818647 | Other | lineage4.3.4.2.1 | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | ERR4769474 | HR-TB | lineage4.9 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | SRR12708370 | Pre-XDR-TB | lineage2.2.2 | None | SRR29096174 | Sensitive | La1.7;lineage4.9 | None | SRR10808399 | Sensitive | lineage4.9 | None | SRR12708392 | Other | lineage2.2.1 | None | SRR26399255 | Sensitive | lineage2.2.1 | None | ERR11465714 | Other | lineage1.2.2.1;lineage4.4.1.1 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | ERR3275190 | Other | lineage3 | nl | ERR4798823 | HR-TB | lineage4 | None | ERR4819314 | Other | lineage1.1.1 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6044875 | Sensitive | lineage4.9 | None | SRR12708409 | HR-TB | lineage4.3.3 | None |
|---|
