Rv0005 - c.1311A>G


Drug resistance types
26 Sensitive 1 RR-TB 40 HR-TB 21 MDR-TB 0 Pre-XDR-TB 0 XDR-TB 48 Other
lineage Counts
lineage Count
6
lineage4.9 60
La1.7;M.canetti;lineage4.9 2
M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
lineage4.4.2 17
La3;M.canetti;lineage2.1;lineage4.9 2
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
lineage2.1;lineage6.3 1
lineage2.2 2
La3;lineage2.1;lineage4.9;lineage6.3 1
lineage2.1;lineage4.9;lineage6.3 5
lineage4 3
La3;M.canetti;lineage4.8;lineage4.9 1
lineage1;lineage4.9 1
lineage2.1;lineage4.1.4;lineage4.9 1
lineage4.6.2.2 3
lineage2.2.1;lineage4.4.2 1
La1.7.1;lineage4.9 1
M.canetti;lineage2.2.2;lineage6.2 2
lineage4.2;lineage4.8.1;lineage4.9 2
La1.7;lineage4.9 4
lineage4.3.4 1
lineage4.2;lineage4.9 2
M.canetti;lineage2.1;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
M.canetti;lineage4.2;lineage4.9 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 2
lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 1
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
lineage2.1;lineage4.9 1
lineage4.1;lineage4.9 1
lineage4.1.1.3 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 1
M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 1
lineage4.8 1
La1.7.1;La1.7.X-unk4 1
spoligotype Counts
spoligotype Count
None 136
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR9786671 Other None
ERR9786604 Other None
ERR9786843 Other None
SRR28119805 Other lineage4.9 None
ERR363449 Other lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
ERR176651 Other lineage4.9 None
SRR3742665 HR-TB M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
SRR20969522 Other lineage4.4.2 None
ERR369158 Other lineage4.9 None
ERR124652 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
SRR19303884 Other lineage2.1;lineage6.3 None
SRR20969708 HR-TB lineage2.2 None
ERR9119359 Sensitive lineage4.4.2 None
ERR4820773 HR-TB lineage4.9 None
ERR926154 Sensitive lineage4.9 None
SRR27450209 Sensitive lineage4.4.2 None
ERR4811105 HR-TB La3;lineage2.1;lineage4.9;lineage6.3 None
ERR4811311 Other lineage2.1;lineage4.9;lineage6.3 None
ERR373946 Other lineage4.9 None
ERR6865502 Sensitive lineage4 None
ERR038268 MDR-TB La3;M.canetti;lineage4.8;lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR3797036 HR-TB lineage2.1;lineage4.1.4;lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
ERR1063846 HR-TB lineage4.9 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR176779 HR-TB lineage4.9 None
SRR6397497 Sensitive lineage2.2.1;lineage4.4.2 ca
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR4816478 HR-TB lineage4 None
ERR1873492 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR126608 MDR-TB La3;M.canetti;lineage2.1;lineage4.9 None
ERR4819422 HR-TB lineage4.9 None
SRR20969997 Sensitive lineage4.4.2 None
SRR11662690 HR-TB lineage4.9 None
ERR926161 Sensitive lineage4.9 None
ERR971389 Other lineage4.9 None
ERR212001 HR-TB None
ERR349300 Other lineage4.9 None
ERR369162 Other lineage4.9 None
ERR212034 HR-TB La1.7;lineage4.9 None
SRR20969444 Sensitive lineage4.4.2 None
ERR736817 HR-TB lineage4.3.4 None
SRR6046295 MDR-TB lineage4.2;lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
ERR124651 MDR-TB La3;M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR4188247 HR-TB lineage4.9 None
ERR926165 Other lineage4.9 None
SRR20969595 MDR-TB lineage4.4.2 None
ERR926156 Other lineage4.9 None
ERR926162 Sensitive lineage4.9 None
ERR926157 Other lineage4.9 None
ERR369163 Other lineage4.9 None
SRR671764 Sensitive lineage4.4.2 cn
SRR20970040 Sensitive lineage4.4.2 None
ERR4831546 HR-TB M.canetti;lineage2.2.2;lineage6.2 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR926160 Other lineage4.9 None
SRR7496472 Other lineage4.9 None
ERR349264 Other lineage4.9 None
ERR4815441 HR-TB lineage4.9 None
SRR3675571 MDR-TB M.canetti;lineage4.2;lineage4.9 None
ERR926163 Other lineage4.9 None
SRR6045887 Other La1.7;M.canetti;lineage4.9 None
ERR926159 Sensitive lineage4.9 None
ERR126600 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR1063858 HR-TB lineage4.9 None
ERR4819877 HR-TB lineage4.9 None
ERR126618 MDR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR4817731 HR-TB lineage4.9 None
ERR1334034 Other lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 None
ERR926164 Other lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
ERR363453 Other lineage4.9 None
ERR736867 Other lineage2.1;lineage4.9 None
ERR4798431 Other lineage4.1;lineage4.9 None
SRR6044835 Other lineage4.9 None
SRR27450266 Sensitive lineage4.4.2 None
ERR11465024 Other lineage4.1.1.3 None
ERR212125 HR-TB lineage4.9 None
ERR216938 HR-TB La1.7;lineage4.9 None
SRR26112647 Sensitive lineage4.4.2 None
ERR2026697 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR349266 Other lineage4.9 None
ERR181824 MDR-TB lineage4.9 None
ERR176560 HR-TB La1.7;lineage4.9 None
SRR20969509 HR-TB lineage4.4.2 None
ERR363456 Sensitive lineage4.9 None
SRR6789626 Other None
ERR9787197 Other None
ERR3797029 Other lineage4.9 None
SRR21732420 Sensitive lineage4.4.2 None
ERR4810624 MDR-TB lineage2.2 None
ERR373945 Other lineage4.9 None
SRR20969825 HR-TB lineage4.4.2 None
ERR363499 Other lineage4.9 None
ERR4811075 Other lineage2.1;lineage4.9;lineage6.3 None
SRR12416824 HR-TB lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 None
ERR4818929 HR-TB lineage4.9 None
ERR349296 Sensitive lineage4.9 None
ERR124642 MDR-TB M.canetti;lineage2.1;lineage4.1.4;lineage4.9;lineage6.3 None
ERR9786569 Other lineage4.8 None
SRR3675529 Other lineage2.1;lineage4.9;lineage6.3 None
SRR6480425 Sensitive lineage4.4.2 None
ERR363506 Sensitive lineage4.9 None
ERR2026698 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR9119669 MDR-TB lineage4.9 None
ERR369161 Sensitive lineage4.9 None
ERR181887 Other lineage4.9 None
ERR349265 Other lineage4.9 None
SRR6046133 HR-TB lineage4.9 None
SRR8552928 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR176778 HR-TB lineage4.9 None
ERR926158 Sensitive lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR1063862 HR-TB lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR363502 Other lineage4.9 None
ERR363509 Sensitive lineage4.9 None
SRR19295647 HR-TB lineage4.9 None
ERR4816656 Other lineage4.9 None
ERR4178226 Sensitive lineage4 None
SRR26399711 Sensitive lineage4.4.2 None
ERR373947 Other lineage4.9 None
ERR736871 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR294266 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR4830213 Sensitive lineage4.4.2 vn
ERR4819241 Other lineage4.9 None
ERR926155 Other lineage4.9 None
ERR9786645 Other lineage4.6.2.2 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
SRR20970064 Sensitive lineage4.4.2 None