Rv0682 - c.204C>G
Drug resistance types
111 Sensitive
6 RR-TB
89 HR-TB
11 MDR-TB
9 Pre-XDR-TB
0 XDR-TB
74 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.3.3 | 1 |
| 59 | |
| lineage2.2.1 | 18 |
| lineage4.6.1.1 | 1 |
| lineage4.8.1 | 1 |
| lineage4 | 70 |
| lineage4.1.2.1;lineage2.2.1 | 1 |
| lineage2.2 | 4 |
| lineage4.9 | 99 |
| La1.8.1 | 2 |
| lineage4.1.2.1 | 7 |
| lineage4.9;La1.3 | 2 |
| La1.2 | 1 |
| lineage2.2.1.2 | 3 |
| lineage4.5 | 2 |
| lineage4.3.4 | 1 |
| lineage4.9.1 | 1 |
| lineage4.8 | 4 |
| La3 | 1 |
| lineage2.2.1.1 | 4 |
| lineage4.9;lineage2.2 | 1 |
| lineage4.4.1.1.1 | 1 |
| lineage2 | 1 |
| lineage7;lineage2.2.1.2 | 1 |
| La1.4 | 1 |
| lineage3 | 4 |
| La1.7.1 | 1 |
| lineage4.1 | 2 |
| lineage6.3;lineage4.9;lineage2.1 | 1 |
| lineage4.3 | 1 |
| lineage4.2.1 | 2 |
| lineage5.1.4 | 1 |
| lineage1.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 300 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6832644 | Other | lineage4.3.3 | None | ERR502943 | HR-TB | None | ERR294266 | HR-TB | None | SRR9971114 | Other | lineage2.2.1 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | ERR323045 | HR-TB | None | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR1063859 | HR-TB | None | ERR323108 | HR-TB | lineage4 | None | ERR1063855 | Other | lineage4 | None | ERR1063858 | HR-TB | None | ERR11488822 | Pre-XDR-TB | lineage4.1.2.1;lineage2.2.1 | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063857 | HR-TB | None | ERR1063862 | HR-TB | None | ERR108471 | HR-TB | lineage4 | None | ERR3283021 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3283033 | Sensitive | lineage4.9 | None | ERR3445504 | HR-TB | None | ERR3445503 | HR-TB | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349265 | Sensitive | lineage4 | None | ERR349264 | Sensitive | lineage4 | None | ERR349298 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR349330 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR363506 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369163 | Sensitive | lineage4 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369162 | Sensitive | lineage4 | None | ERR369158 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR3797036 | HR-TB | None | ERR3797046 | HR-TB | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3797060 | Other | La1.8.1 | None | ERR3797047 | HR-TB | lineage4 | None | ERR4178226 | Sensitive | lineage4 | None | ERR3797081 | Sensitive | lineage4 | None | ERR400320 | Sensitive | lineage4 | None | ERR400326 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR3806850 | HR-TB | lineage4.1.2.1 | None | ERR4188247 | HR-TB | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR473332 | Other | lineage4 | None | ERR4596910 | Sensitive | lineage4 | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4769446 | Sensitive | lineage4.9;La1.3 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769452 | HR-TB | None | ERR4769457 | Other | lineage4.9 | None | ERR4769450 | HR-TB | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769521 | HR-TB | None | ERR4797313 | HR-TB | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4798431 | HR-TB | None | ERR4799025 | Pre-XDR-TB | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4799989 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR6359045 | HR-TB | None | ERR4812155 | Sensitive | None | ERR4811030 | Sensitive | None | ERR4811493 | HR-TB | None | ERR6359069 | Other | lineage4.9 | None | ERR6359066 | HR-TB | lineage4 | None | ERR6359070 | Other | lineage4.9 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR6865502 | Sensitive | lineage4 | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR6866807 | HR-TB | lineage4 | None | ERR245758 | Other | lineage4.9.1 | None | ERR736856 | HR-TB | lineage4 | None | ERR736848 | HR-TB | None | ERR736837 | Other | lineage4.9 | None | ERR736875 | HR-TB | lineage4 | None | ERR9786444 | Sensitive | lineage4.8 | None | ERR9786986 | HR-TB | lineage4.1.2.1 | None | ERR9786911 | HR-TB | lineage4.1.2.1 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1049674 | HR-TB | lineage2.2.1 | None | SRR1049675 | HR-TB | lineage2.2.1 | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1169249 | Other | La3 | None | SRR1169306 | Other | None | SRR1173185 | HR-TB | lineage4.9 | None | SRR1173515 | HR-TB | lineage4.9 | None | SRR1167384 | Other | lineage4 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1173450 | RR-TB | lineage4.9 | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1175508 | Other | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1175513 | Other | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1184308 | Sensitive | lineage4.9 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR1184329 | MDR-TB | lineage4.9 | None | SRR1196545 | HR-TB | lineage4.9 | None | SRR1196478 | MDR-TB | lineage4.9 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR16156188 | HR-TB | lineage4.9 | None | SRR14782405 | HR-TB | None | SRR16157123 | Other | lineage4.9 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR16278274 | Other | La1.4 | None | SRR17658565 | Other | lineage3 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR20632814 | Sensitive | lineage4 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675473 | Sensitive | lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675477 | Other | lineage4.9 | None | SRR3675472 | Sensitive | lineage4.9 | None | ERR176779 | HR-TB | None | ERR176778 | HR-TB | None | SRR3675210 | Sensitive | lineage4.9 | None | SRR3675209 | Sensitive | lineage4.9 | None | SRR3675270 | HR-TB | None | ERR181824 | HR-TB | lineage4 | None | SRR3675247 | Other | lineage4.9 | None | ERR4815471 | Other | lineage4.9 | None | ERR3275450 | Other | lineage4 | None | SRR3675229 | Other | lineage4 | None | SRR3675249 | Sensitive | lineage4.9 | None | SRR3675265 | Other | lineage4 | None | ERR176568 | Other | lineage4.3 | None | SRR3675292 | Sensitive | lineage4 | None | SRR3675279 | Other | None | ERR176643 | HR-TB | None | ERR176651 | HR-TB | None | SRR3675312 | HR-TB | lineage4 | None | ERR4814976 | Other | lineage4.9 | None | SRR3675387 | Sensitive | None | ERR181887 | HR-TB | None | SRR3675318 | Other | lineage4.9 | None | ERR4816964 | Other | lineage4.9 | None | ERR176751 | HR-TB | None | SRR3675509 | Other | lineage4.9 | None | SRR3675522 | Other | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675527 | RR-TB | lineage4.9 | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675542 | Other | lineage4.9 | None | ERR4816151 | Other | lineage4.8 | None | SRR3675548 | Sensitive | lineage4.9 | None | SRR3675547 | Other | lineage4.9 | None | SRR3675553 | Sensitive | lineage4.9 | None | ERR4816470 | Other | lineage3 | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR212033 | HR-TB | None | ERR4816322 | Other | lineage4.9 | None | ERR212125 | HR-TB | lineage4 | None | ERR4818646 | Sensitive | lineage4.1.2.1 | None | ERR212138 | HR-TB | lineage4 | None | ERR4816466 | HR-TB | None | SRR3675571 | HR-TB | None | ERR4816548 | MDR-TB | lineage4.5 | None | ERR4816656 | HR-TB | None | ERR4816852 | Other | lineage4.9 | None | ERR4818710 | Sensitive | lineage4.9 | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR4819051 | Other | lineage4 | None | ERR2512770 | Other | lineage4.2.1 | None | ERR4818607 | Sensitive | lineage4.9 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | ERR2514327 | HR-TB | lineage4.8 | None | ERR2446566 | Other | lineage4.1 | None | ERR4818929 | HR-TB | None | ERR2513283 | Other | lineage5.1.4 | None | ERR4819357 | Other | lineage4.9 | None | SRR5341456 | Other | None | SRR5341267 | Pre-XDR-TB | lineage3 | None | ERR1023509 | Other | None | ERR4819933 | Other | lineage4.9 | None | ERR2446382 | Other | lineage4 | None | ERR6359082 | Other | lineage4.9 | None | SRR5341330 | HR-TB | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | ERR4821811 | RR-TB | lineage4.9 | None | SRR5535933 | HR-TB | None | SRR6045503 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6045519 | HR-TB | None | ERR2660539 | Other | lineage4.9 | None | ERR2693227 | Other | lineage4.9 | None | SRR6045706 | Sensitive | lineage4 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6046133 | HR-TB | None | SRR6044780 | Other | lineage4.9 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6044838 | Other | lineage4.9 | None | SRR6044835 | Sensitive | lineage4 | None | SRR6045399 | Other | None | SRR6045010 | Other | lineage4 | None | SRR6045053 | Other | None | SRR6045217 | Other | lineage4 | None | SRR6046046 | Other | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6045033 | HR-TB | None | SRR6046299 | HR-TB | None | SRR6046253 | HR-TB | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6046611 | HR-TB | lineage4.9 | None | SRR6046492 | Other | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046385 | Other | lineage4.9 | None | SRR6046397 | Other | None | SRR6046897 | Sensitive | lineage4 | None | SRR6046839 | Other | lineage4.9 | None | SRR6046863 | Sensitive | lineage1.1.2 | None | SRR6046878 | HR-TB | lineage4 | None | SRR6046802 | Other | lineage4 | None | ERR323037 | HR-TB | lineage4 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR4831117 | HR-TB | None | ERR4831638 | Sensitive | None |
|---|
