Rv0682 - c.93T>C


Drug resistance types
36 Sensitive 3 RR-TB 33 HR-TB 6 MDR-TB 0 Pre-XDR-TB 0 XDR-TB 24 Other
lineage Counts
lineage Count
lineage4.9 50
La3;lineage4.9 8
lineage4.4.1.2 1
lineage4.3.4.1 2
La1.7;lineage3;lineage4.9;lineage7 1
La1.2.BCG 1
La1.6;lineage4 1
La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 1
lineage4.3.4 1
lineage4.4.1.1 1
La3;lineage4 1
La1.7;lineage4.9 2
M.canetti;lineage1 1
La1;lineage4.9 2
La1.7.1;La1.7.X-unk4;lineage7 1
lineage4.9;lineage7 4
La1.7;lineage4.9;lineage7 3
lineage2.1;lineage4.9;lineage7 1
1
M.canetti;lineage4.9;lineage9 1
La2;lineage2.2 1
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
lineage4.6.3;lineage4.9 1
lineage2.1;lineage4.9 1
La2;lineage4.9 1
lineage1;lineage4.9 1
lineage4.1.1.2 1
La1;lineage2;lineage4.9 1
lineage2.2.1;lineage4.5 1
La1.2.BCG;lineage4.9 1
La1.7.1;lineage4.9 1
lineage1.1.2 1
La1;lineage4.1.2 1
lineage2.2.1 1
La1.7.1 1
La1.7.1;La1.7.X-unk4 1
lineage4.2.1 1
spoligotype Counts
spoligotype Count
None 102
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR8217918 HR-TB lineage4.9 None
ERR3797064 Other La3;lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR11465352 Sensitive lineage4.3.4.1 None
ERR1034634 HR-TB lineage4.9 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
ERR3283057 Sensitive La3;lineage4.9 None
ERR4796929 Sensitive lineage4.9 None
SRR1915487 Other La1.2.BCG None
SRR11662690 HR-TB lineage4.9 None
ERR176778 HR-TB lineage4.9 None
ERR736875 HR-TB lineage4.9 None
SRR28351554 Sensitive La1.6;lineage4 None
ERR1034652 Other La3;lineage4.1.2.1;lineage4.2.1;lineage4.5;lineage4.9;lineage6.1.1;lineage6.3.2 None
SRR5341373 Other lineage4.9 None
ERR736817 HR-TB lineage4.3.4 None
ERR387051 Other lineage4.9 None
SRR26112715 Sensitive lineage4.4.1.1 None
ERR3283028 Other La3;lineage4 None
SRR5341400 Sensitive lineage4.9 None
ERR3797048 Other La3;lineage4.9 None
SRR10809074 Sensitive lineage4.9 None
ERR3283014 Sensitive La3;lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
ERR216938 HR-TB La1.7;lineage4.9 None
SRR15014655 Other M.canetti;lineage1 None
ERR1063846 HR-TB lineage4.9 None
SRR3675280 RR-TB lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR108471 HR-TB lineage4.9 None
ERR971389 Sensitive lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
ERR926164 Other lineage4.9 None
ERR1063849 HR-TB lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
SRR3675456 RR-TB lineage4.9;lineage7 None
SRR6044835 Other lineage4.9 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
ERR926156 Sensitive lineage4.9 None
SRR19295647 Sensitive lineage4.9 None
ERR3445502 Sensitive lineage4.9;lineage7 None
ERR926165 Sensitive lineage4.9 None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
ERR926155 Sensitive lineage4.9 None
ERR4796577 HR-TB None
ERR3283040 HR-TB lineage4.9 None
ERR3797029 Other lineage4.9 None
ERR1063856 HR-TB M.canetti;lineage4.9;lineage9 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR4188247 HR-TB lineage4.9 None
SRR5341432 Sensitive La1.7;lineage4.9;lineage7 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR6046577 Other lineage4.6.3;lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
SRR3675495 Other lineage2.1;lineage4.9 None
ERR736848 Other lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR181887 Other lineage4.9 None
ERR3283030 HR-TB lineage4.9 None
ERR3283031 Sensitive La3;lineage4.9 None
ERR4821655 HR-TB lineage4.9 None
SRR14801749 HR-TB lineage4.9 None
ERR4818252 Sensitive lineage4.1.1.2 None
ERR067699 Sensitive La1;lineage2;lineage4.9 None
ERR3283047 Sensitive La3;lineage4.9 None
ERR3283011 Other La3;lineage4.9 None
SRR15368745 Sensitive lineage2.2.1;lineage4.5 None
SRR10808805 Other La1;lineage4.9 None
SRR1915481 Other La1.2.BCG;lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR926159 Sensitive lineage4.9 None
ERR4797193 HR-TB lineage1.1.2 None
SRR9970978 Sensitive La1;lineage4.1.2 None
ERR11465353 Sensitive lineage4.3.4.1 None
ERR3797081 Sensitive lineage4.9 None
ERR181824 HR-TB lineage4.9 None
SRR3675539 HR-TB lineage4.9;lineage7 None
SRR6046382 Sensitive lineage2.2.1 None
ERR1063858 HR-TB lineage4.9 None
SRR6045010 Sensitive lineage4.9 None
ERR926157 Sensitive lineage4.9 None
ERR176651 Other lineage4.9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
SRR6046210 Other lineage4.9 None
SRR1792478 HR-TB La1.7.1 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
ERR926162 Sensitive lineage4.9 None
ERR926160 Sensitive lineage4.9 None
ERR736856 Sensitive lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
SRR16156817 Other lineage4.9 None
ERR4819051 Sensitive lineage4.9 None
ERR3797063 Sensitive La3;lineage4.9 None
ERR926158 Sensitive lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR926161 Sensitive lineage4.9 None
ERR926163 Other lineage4.9 None
SRR14802079 MDR-TB lineage4.2.1 None
ERR926154 Sensitive lineage4.9 None