Rv0006 - c.1632G>C
Drug resistance types
19 Sensitive
5 RR-TB
33 HR-TB
21 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
144 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage2.2.2;lineage4 | 1 |
| lineage2.1;lineage4.3.2;lineage4.9 | 1 |
| lineage4.9 | 50 |
| lineage4.3.2 | 1 |
| lineage4 | 3 |
| La2;lineage4.9;lineage9 | 1 |
| lineage3 | 8 |
| La3 | 2 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| 23 | |
| lineage2.1;lineage4.9 | 14 |
| La3;lineage4.8 | 2 |
| lineage2.2.1 | 16 |
| lineage6.1.3 | 2 |
| lineage4.6.2.2 | 3 |
| lineage2.1 | 5 |
| lineage4.3.4.2.1 | 1 |
| lineage4.1 | 1 |
| lineage4.1.2.1 | 9 |
| La1.2.BCG;La1.8.1 | 1 |
| lineage2.1;lineage4.9;lineage6.3 | 8 |
| lineage6.1.1 | 2 |
| lineage4.6.1.1 | 1 |
| lineage2.2 | 2 |
| lineage4.7 | 2 |
| lineage2.1;lineage6.3 | 2 |
| La3;lineage1.1.2 | 1 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 4 |
| La3;M.canetti;lineage4.9 | 1 |
| lineage4.8 | 3 |
| La1.7;lineage4.9 | 2 |
| lineage4.6.3;lineage4.9;lineage6.3 | 1 |
| La3;lineage2.2.2 | 2 |
| lineage4.1;lineage4.8 | 2 |
| lineage4.4.1.1 | 2 |
| lineage4.2.2.2 | 1 |
| La3;lineage2.2.1 | 1 |
| lineage4.9;lineage9 | 2 |
| lineage4.1.1.1 | 1 |
| La3;lineage4.9 | 4 |
| lineage4.1.2 | 3 |
| M.canetti;lineage4.9 | 1 |
| lineage4.1.3 | 2 |
| lineage3.1 | 1 |
| lineage4.1.1.3 | 1 |
| lineage4.9;lineage6.3 | 6 |
| lineage4.3.2;lineage4.9 | 1 |
| lineage4.3.3 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| La3;lineage2.1;lineage4.9 | 2 |
| lineage2.2.1;lineage6.3 | 1 |
| lineage3.1.2.2 | 1 |
| La3;lineage4.3.4 | 1 |
| lineage3.1.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
| lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| lineage1.1.1 | 1 |
| La3;lineage2.1;lineage6.3 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La3;lineage2 | 1 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| lineage6.3.1 | 1 |
| lineage1.1;lineage4 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 225 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR29093105 | Other | lineage2.2.2;lineage4 | None | SRR6045327 | Other | lineage2.1;lineage4.3.2;lineage4.9 | None | ERR4814639 | HR-TB | lineage4.9 | None | ERR9117805 | Other | lineage4.3.2 | None | ERR3283044 | Other | lineage4 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | ERR4596902 | MDR-TB | lineage3 | None | ERR990545 | Other | lineage3 | None | SRR1165699 | Other | lineage4.9 | None | ERR108471 | HR-TB | lineage4.9 | None | SRR1172728 | RR-TB | La3 | None | SRR8217918 | HR-TB | lineage4.9 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR9117709 | Other | None | SRR1172817 | Other | La3 | None | SRR1173400 | Other | lineage4.9 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | SRR7496509 | Other | None | ERR12015083 | Other | La3;lineage4.8 | None | SRR29126661 | HR-TB | lineage2.2.1 | None | ERR1023236 | Other | lineage6.1.3 | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR9786645 | Other | lineage4.6.2.2 | None | SRR7496472 | Other | lineage4.9 | None | ERR4796929 | Sensitive | lineage4.9 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR9786843 | Other | None | SRR1184381 | MDR-TB | None | ERR2514692 | Other | None | ERR987722 | MDR-TB | None | SRR1172857 | Other | None | ERR9787197 | Other | None | SRR12142341 | HR-TB | lineage2.1 | None | ERR176549 | Other | lineage4.3.4.2.1 | None | ERR4819781 | Other | lineage2.2.1 | None | SRR1184372 | MDR-TB | None | ERR4818530 | Sensitive | lineage2.2.1 | gb | ERR9786440 | Other | lineage4.1 | None | SRR5341333 | Other | lineage2.1;lineage4.9 | None | SRR6045503 | Sensitive | lineage4.9 | None | SRR1196566 | Other | lineage4.9 | None | SRR3675232 | Other | lineage4.1.2.1 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4818021 | Other | La1.2.BCG;La1.8.1 | None | SRR3675508 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR6045359 | Sensitive | lineage4.9 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR6358755 | Other | lineage4.6.1.1 | None | SRR25515842 | Sensitive | lineage2.2.1 | None | SRR1710057 | Other | lineage2.1 | None | SRR3675214 | Other | lineage4.9 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | SRR1183049 | RR-TB | lineage2.2 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3797069 | Other | lineage4.9 | None | ERR4819932 | Other | lineage4.7 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | SRR3416776 | Other | lineage2.1 | None | ERR9117721 | HR-TB | La3;lineage1.1.2 | None | ERR4811142 | RR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR7496517 | Other | None | ERR473277 | HR-TB | La3;M.canetti;lineage4.9 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1196494 | MDR-TB | None | ERR4816585 | Other | lineage2.2 | None | ERR067712 | Sensitive | lineage4.9 | None | SRR3675574 | Other | lineage4.6.3;lineage4.9;lineage6.3 | None | SRR15368973 | Other | lineage4.9 | None | SRR29093099 | MDR-TB | La3;lineage2.2.2 | None | SRR6046066 | Other | lineage4.9 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | ERR2027263 | Other | lineage4 | None | ERR9786526 | Other | lineage4.1;lineage4.8 | None | ERR212123 | Other | lineage4.9 | None | SRR6046521 | Other | lineage4.4.1.1 | None | ERR2513470 | Other | lineage4.2.2.2 | None | ERR4819051 | Sensitive | lineage4.9 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | SRR29055629 | MDR-TB | La3;lineage2.2.1 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | SRR28119753 | Other | lineage4.9 | None | SRR3675248 | Other | lineage4.9 | None | SRR1196546 | Other | lineage4.9 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | SRR6046720 | HR-TB | lineage4.9;lineage9 | None | SRR29093909 | Other | lineage4.9 | None | SRR3675236 | Other | None | ERR176793 | Other | lineage4.1.1.1 | None | SRR29017461 | Other | La3;lineage4.9 | None | SRR7070591 | Sensitive | lineage4.1.2 | None | SRR7535086 | Other | None | ERR4800341 | Other | lineage3 | None | SRR29096387 | Sensitive | M.canetti;lineage4.9 | None | SRR28119777 | Other | lineage4.9 | None | ERR4819546 | HR-TB | lineage3 | None | ERR9786611 | HR-TB | lineage4.1.3 | None | ERR11067564 | Sensitive | lineage4.1.2 | None | ERR702404 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR29097026 | Other | lineage4.9 | None | ERR4797054 | Pre-XDR-TB | lineage2.1 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | ERR4407452 | Other | lineage3 | None | SRR1183111 | HR-TB | lineage4.9 | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR29016780 | Other | lineage4.9 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR7821163 | Other | lineage2.2.1 | None | ERR3804155 | Other | lineage4.1.2.1 | None | SRR29097037 | Other | lineage4.9 | None | ERR9786642 | Other | lineage4.1.2.1 | None | SRR3675221 | Other | lineage4.9 | None | SRR6789621 | Other | lineage4.9 | None | ERR11465024 | Other | lineage4.1.1.3 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786671 | Other | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | SRR1180226 | HR-TB | lineage4.9 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | ERR4814881 | Sensitive | lineage2.2.1 | gb | ERR7737627 | MDR-TB | lineage2.2.1 | None | SRR1173363 | Other | None | SRR3675572 | Other | None | SRR3675510 | Sensitive | La3;lineage4.9 | None | SRR21732980 | Other | lineage4.3.3 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | SRR6045242 | Other | lineage2.1;lineage4.9 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | ERR9786694 | Other | lineage4.1.2.1 | None | SRR1180137 | Other | lineage2.2.1 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR4816762 | Sensitive | lineage4.9 | None | SRR1196768 | MDR-TB | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR181744 | HR-TB | La3;lineage4.9 | None | SRR18213713 | HR-TB | None | SRR6044875 | Sensitive | lineage4.9 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | SRR1175074 | Other | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | ERR11067774 | Sensitive | lineage4.1.2 | None | SRR1169194 | Other | lineage4.9 | None | ERR4811105 | HR-TB | La3;lineage2.1;lineage4.9;lineage6.3 | None | ERR4815604 | Other | None | ERR1035157 | Other | lineage4.9 | None | SRR10809074 | Sensitive | lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | SRR28119811 | Other | lineage2.2.1;lineage6.3 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | ERR161039 | HR-TB | La3;lineage4.3.4 | None | ERR161037 | Other | lineage4.9 | None | SRR1196474 | Other | lineage3.1.1 | None | ERR13245558 | MDR-TB | La3;lineage2.2.2 | None | ERR4820854 | Other | lineage4.1.2.1 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | ERR3804169 | HR-TB | lineage4.1.3 | None | ERR702406 | Other | lineage2.1 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | ERR3273154 | RR-TB | lineage2.2.1.1 | None | SRR29096150 | Other | lineage4.9 | None | SRR12416840 | MDR-TB | lineage4.9 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | SRR5341302 | Other | La3;lineage2.1;lineage4.9 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | ERR3799304 | Other | lineage6.1.1 | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | SRR3675517 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR6046225 | Other | lineage4.9;lineage6.3 | None | SRR1184294 | Other | lineage4.9 | None | ERR502912 | Other | lineage2.2.1 | None | ERR4815815 | Sensitive | lineage4.9 | None | SRR7131023 | Other | lineage4.1.2.1 | None | ERR3797070 | Other | lineage4.9 | None | SRR12416824 | HR-TB | lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR28119805 | Other | lineage4.9 | None | ERR4814352 | Other | lineage2.2.1 | None | ERR9786525 | Other | lineage4.1;lineage4.8 | None | SRR7496523 | Other | lineage4.7 | None | ERR9786604 | Other | None | SRR1165667 | Other | lineage4.9;lineage6.3 | None | ERR4815752 | Other | lineage4.9 | None | SRR6045380 | Other | lineage2.1;lineage4.9 | None | SRR29096410 | Other | lineage4.9 | None | ERR9787165 | Other | lineage6.1.3 | None | ERR4819314 | Other | lineage1.1.1 | None | SRR1172951 | Other | lineage4.9 | None | SRR1173778 | Other | lineage4.9 | None | ERR9786569 | Other | lineage4.8 | None | SRR1196583 | Other | lineage4.9 | None | SRR6046540 | Other | lineage2.1;lineage4.9 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | SRR3675275 | Other | lineage4.9 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | ERR4817893 | Other | La3;lineage4.8 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | SRR20969677 | HR-TB | La3;lineage2 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | ERR9787139 | Other | lineage6.3.1 | None | ERR4811075 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1184388 | Other | lineage2.1;lineage4.9 | None | ERR4817735 | Other | lineage4.8 | None | SRR18003019 | Other | lineage2.2.1 | None | SRR26399973 | Other | La3;lineage4.9 | None | ERR9786682 | Other | lineage4.1.2.1 | None | SRR6044780 | Sensitive | lineage4.9 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SRR5341332 | Pre-XDR-TB | lineage3 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | ERR4819322 | Other | lineage1.1;lineage4 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1184312 | Other | lineage2.2.1 | None | ERR4820335 | Other | lineage4.1.2.1 | None | SRR6045526 | Other | lineage4.9 | None | ERR4816999 | Other | None | SRR6789626 | Other | None | ERR4797588 | MDR-TB | lineage3 | None | ERR4798504 | RR-TB | lineage3 | None |
|---|
