Rv0006 - c.1632G>C


Drug resistance types
17 Sensitive 2 RR-TB 78 HR-TB 15 MDR-TB 3 Pre-XDR-TB 0 XDR-TB 96 Other
lineage Counts
lineage Count
lineage4.9 15
88
lineage4.3.4.1 1
lineage2.1 2
lineage4.5 1
lineage2.2.1 19
lineage2.2 3
lineage2 3
lineage3.1.3 1
lineage4.1.2 2
lineage4.3.3 2
lineage4.9;La3 1
lineage6.3;lineage2.2.1 1
lineage4.1.1 1
lineage4.3.4 1
lineage4;lineage2 1
lineage4 15
lineage4.1.2.1 10
lineage4.4.1.1 2
lineage4.8 3
lineage4.8;La3 2
La1.8.1 2
lineage1.1.1 1
lineage4.2.2.2 1
lineage3 8
lineage4;lineage1.1 1
lineage4.7 2
lineage4.6.2.2 3
lineage4.2.1 1
lineage4.1.1.3 1
lineage2.2.1.1 1
lineage6.1.1 2
lineage4.1.3 2
lineage3.1.2 1
lineage4.6.1.1 1
lineage1.1.2 1
lineage4.3.4.2.1 1
lineage4.3.2 1
lineage4.1 1
lineage4.8;lineage4.1 2
lineage6 1
lineage6.3.1 1
lineage3.1 2
spoligotype Counts
spoligotype Count
None 211
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR12416840 MDR-TB lineage4.9 None
SRR12416824 HR-TB None
SRR13583478 HR-TB lineage4.3.4.1 None
SRR15368973 Other None
SRR1710057 Other lineage2.1 None
SRR18213713 HR-TB lineage4.5 None
SRR18003019 Other lineage2.2.1 None
SRR22424787 Sensitive lineage4.9 None
SRR18910194 HR-TB lineage2.2 None
SRR20969677 HR-TB lineage2 None
SRR18913742 Sensitive lineage3.1.3 None
SRR19295647 Sensitive lineage4.9 None
SRR19303884 HR-TB None
SRR19304036 HR-TB None
SRR25515842 Sensitive lineage2.2.1 None
ERR11067774 Sensitive lineage4.1.2 None
SRR21732980 Other lineage4.3.3 None
SRR3416776 Other lineage2.1 None
SRR26399973 Other lineage4.9;La3 None
SRR28119811 Other lineage6.3;lineage2.2.1 None
ERR176793 Other lineage4.1.1 None
ERR4814352 HR-TB lineage2.2.1 None
ERR161039 Sensitive lineage4.3.4 None
ERR4815604 HR-TB None
SRR3675465 HR-TB None
ERR4816762 Other lineage4;lineage2 None
ERR4814639 HR-TB lineage4 None
SRR3675236 HR-TB None
SRR3675232 Other lineage4.1.2.1 None
SRR3675311 Other None
ERR176740 HR-TB None
SRR3675510 Other None
ERR4816999 Other None
ERR4817060 RR-TB None
ERR212123 Other None
SRR3675574 HR-TB None
ERR4816559 MDR-TB lineage4.4.1.1 None
SRR3742665 HR-TB None
ERR181744 HR-TB None
SRR3675221 HR-TB None
ERR4815752 Other lineage4.9 None
ERR2027263 Other lineage4 None
ERR4817037 Other lineage4.9 None
SRR3675572 Other None
ERR4816585 Other lineage2.2 None
ERR502912 Other lineage2.2.1 None
ERR4815815 Sensitive lineage4 None
ERR4817896 HR-TB lineage2.2.1 None
ERR4817667 HR-TB lineage4.8 None
ERR4817735 Other lineage4.8 None
ERR4817893 Other lineage4.8;La3 None
ERR4819051 Other lineage4 None
ERR4818021 Other La1.8.1 None
SRR7496472 Other None
ERR4818110 Sensitive lineage4.9 None
ERR4819314 Other lineage1.1.1 None
ERR4818561 HR-TB lineage4 None
ERR2513470 Other lineage4.2.2.2 None
ERR4818615 Other None
ERR4819546 HR-TB lineage3 None
ERR4819322 Other lineage4;lineage1.1 None
ERR4820335 Other lineage4.1.2.1 None
ERR4819932 Other lineage4.7 None
SRR5341302 HR-TB None
ERR4819781 Other lineage2.2.1 None
ERR2514692 Other None
ERR2514821 Other lineage2.2.1 None
SRR6045503 HR-TB None
SRR5341333 HR-TB None
SRR5341470 HR-TB None
SRR5341332 Pre-XDR-TB lineage3 None
ERR4820854 Other lineage4.1.2.1 None
SRR6044855 Other lineage4.9 None
SRR6045526 HR-TB None
SRR6044780 Other lineage4.9 None
SRR6044790 HR-TB None
SRR6045327 HR-TB None
SRR6044875 HR-TB lineage4.9 None
SRR6045010 Other lineage4 None
SRR6046066 HR-TB None
SRR6046305 Other lineage4.9 None
SRR6046225 HR-TB None
SRR6045359 Sensitive lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
SRR6046460 HR-TB None
SRR6046521 Other lineage4.4.1.1 None
SRR6046362 HR-TB None
SRR6046540 HR-TB None
SRR6785267 Other lineage2.2.1 None
ERR4872119 MDR-TB lineage4.6.2.2 None
SRR6785262 Sensitive lineage4.2.1 None
ERR4814881 Sensitive lineage2.2.1 gb
SRR6789626 Other None
ERR502532 HR-TB None
ERR11067564 Sensitive lineage4.1.2 None
SRR7131023 Other lineage4.1.2.1 None
SRR7496509 Other None
SRR8217918 HR-TB None
SRR7496517 Other None
SRR7496523 Other lineage4.7 None
SRR7585435 Other lineage4.9 None
SRR7535086 Other None
ERR4818530 Sensitive lineage2.2.1 gb
ERR323039 HR-TB None
ERR323043 HR-TB None
ERR323053 HR-TB None
ERR323108 HR-TB lineage4 None
ERR4819125 Sensitive lineage2.2.1 gb
ERR108471 HR-TB lineage4 None
ERR067712 HR-TB lineage4 None
ERR1035157 Other lineage4.9 None
ERR11465024 Other lineage4.1.1.3 None
ERR3283027 HR-TB None
ERR3273154 RR-TB lineage2.2.1.1 None
ERR3283036 HR-TB None
ERR5336148 Other None
ERR3799304 Other lineage6.1.1 None
ERR3797069 Other None
ERR3804169 HR-TB lineage4.1.3 None
ERR3804155 Other lineage4.1.2.1 None
ERR4407452 Sensitive lineage3 None
ERR4407463 HR-TB None
ERR4797054 Pre-XDR-TB lineage2 None
ERR4596902 HR-TB lineage3 None
ERR4796929 Sensitive lineage4 None
ERR4811022 HR-TB None
ERR4797588 MDR-TB lineage3 None
ERR4798493 MDR-TB lineage2.2.1 None
ERR4798823 HR-TB lineage4 None
ERR4798504 Other lineage3 None
ERR4798648 HR-TB lineage3.1.2 None
ERR4800341 Other lineage3 None
ERR12015083 Other lineage4.8;La3 None
ERR4810741 HR-TB None
ERR6358755 Other lineage4.6.1.1 None
ERR4811105 HR-TB None
ERR4811142 MDR-TB None
ERR736865 HR-TB None
ERR702404 HR-TB None
ERR702406 HR-TB None
ERR9117721 HR-TB lineage1.1.2 None
ERR736867 HR-TB None
ERR176549 Other lineage4.3.4.2.1 None
ERR736874 HR-TB None
ERR7737627 MDR-TB lineage2.2.1 None
ERR7821163 Other lineage2.2.1 None
ERR9117709 HR-TB None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR9117805 Other lineage4.3.2 None
ERR9786440 Other lineage4.1 None
ERR9786515 Other lineage4.1.2.1 None
ERR9786526 Other lineage4.8;lineage4.1 None
ERR9786525 Other lineage4.8;lineage4.1 None
ERR9786604 Other None
ERR9786569 Other lineage4.8 None
ERR9786601 Other lineage4.1.2.1 None
ERR9786611 HR-TB lineage4.1.3 None
ERR9786671 Other None
ERR9786642 Other lineage4.1.2.1 None
ERR9786645 Other lineage4.6.2.2 None
ERR9786682 Other lineage4.1.2.1 None
ERR9787165 Other lineage6 None
ERR9786694 Other lineage4.1.2.1 None
ERR9786843 Other None
ERR9787014 Other lineage6.1.1 None
SRR10809074 Sensitive lineage4 None
ERR9787139 Other lineage6.3.1 None
ERR9787197 Other None
ERR987722 HR-TB None
ERR990545 Other lineage3 None
SRR1172817 HR-TB None
SRR1172234 Other None
SRR1172310 HR-TB None
SRR11462861 Other La1.8.1 None
SRR1169194 Other None
SRR1172728 MDR-TB None
SRR1173153 HR-TB None
SRR1173118 Other None
SRR1172857 MDR-TB None
SRR1172951 Other None
SRR1173218 Pre-XDR-TB lineage4.3.3 None
SRR1173400 Other None
SRR1173363 HR-TB None
SRR1173384 Other lineage4 None
SRR1173484 Other lineage4 None
SRR1173629 Other None
SRR1173562 HR-TB lineage4 None
SRR1173633 HR-TB lineage4.9 None
SRR1173706 Other lineage4.9 None
SRR1173778 Other None
SRR1183049 Other lineage2.2 None
SRR1174897 HR-TB None
SRR1175074 MDR-TB None
SRR1181020 Other lineage2.2.1 None
SRR1181289 Other lineage2.2.1 None
SRR1173788 Other None
SRR1180137 Other lineage2.2.1 None
SRR1184346 HR-TB lineage3.1 None
SRR1184312 HR-TB lineage2.2.1 None
SRR1184294 HR-TB None
SRR1184372 MDR-TB None
SRR1196474 HR-TB lineage3.1 None
SRR1184381 MDR-TB None
SRR1184388 Other None
SRR1184380 HR-TB None
SRR1196494 MDR-TB None
SRR12142341 HR-TB None
SRR1196546 HR-TB None
SRR1196677 HR-TB lineage2 None
SRR1196566 HR-TB None
SRR1196768 MDR-TB None