Rv1630 - c.804C>T
Drug resistance types
52 Sensitive
31 RR-TB
38 HR-TB
18 MDR-TB
13 Pre-XDR-TB
0 XDR-TB
62 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage1.1.2 | 2 |
| lineage4 | 53 |
| 36 | |
| lineage2.2 | 4 |
| lineage4.3.4.2 | 2 |
| lineage3 | 14 |
| lineage2.2.1 | 18 |
| lineage4.6.2.2 | 2 |
| lineage4.4.1.1 | 2 |
| lineage6.1.3 | 1 |
| lineage4.9 | 20 |
| lineage4.3.3 | 3 |
| La2 | 1 |
| lineage4.2.1 | 1 |
| La1.8.1 | 2 |
| lineage2.2.2 | 1 |
| lineage4.1.1.3 | 2 |
| lineage1.2.2.2 | 1 |
| lineage4.8 | 8 |
| lineage4.3.4.2.1 | 3 |
| lineage1.1.3.1 | 3 |
| lineage3.1.2 | 1 |
| lineage2.1 | 3 |
| lineage4.1 | 1 |
| lineage2.2.1.1 | 2 |
| lineage3.1 | 1 |
| lineage5 | 1 |
| lineage3.1.1 | 2 |
| lineage3.1.2.1 | 2 |
| lineage4.1.2.1 | 7 |
| lineage4.2.1.1 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.5 | 1 |
| lineage4.1.1 | 1 |
| lineage4.1.1.3.1 | 1 |
| lineage4.3.4.1 | 3 |
| lineage4.9;lineage2.1 | 1 |
| lineage4.3.1 | 1 |
| lineage4.7 | 1 |
| lineage4.3.2.1 | 1 |
| lineage4.1.2 | 2 |
| lineage4.4.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 214 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4798099 | Other | None | ERR4797474 | Other | None | ERR4797264 | Sensitive | None | ERR4799378 | Sensitive | lineage4 | None | ERR6358991 | HR-TB | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR6358979 | Other | None | ERR6866639 | Other | None | ERR6866547 | Sensitive | lineage4 | None | ERR6866022 | Other | None | ERR736856 | HR-TB | lineage4 | None | ERR736834 | Sensitive | lineage4 | None | ERR736839 | Other | None | ERR9786592 | Sensitive | lineage4.3.4.2 | None | ERR736872 | Sensitive | lineage4 | None | ERR751326 | Sensitive | lineage4 | None | ERR9786076 | Sensitive | lineage3 | None | SRR10315556 | Sensitive | lineage2.2.1 | None | ERR9786597 | Sensitive | lineage4.6.2.2 | None | ERR9896153 | RR-TB | lineage4.4.1.1 | None | ERR9787256 | Other | lineage6.1.3 | None | SRR10809074 | Sensitive | lineage4 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR10808668 | Sensitive | lineage2.2.1 | None | SRR10315551 | Sensitive | lineage2.2.1 | None | SRR10808399 | Sensitive | lineage4 | None | SRR10808805 | Sensitive | None | SRR1173568 | Other | lineage4.9 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1173777 | Other | lineage4 | None | SRR14801652 | MDR-TB | lineage4.3.3 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1181250 | Other | lineage4.9 | None | SRR13888750 | Other | La2 | None | SRR14801749 | Sensitive | None | SRR18002881 | Pre-XDR-TB | lineage2.2.1 | None | SRR1735596 | RR-TB | lineage4.9 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None | SRR1791747 | Other | La1.8.1 | None | SRR18003047 | MDR-TB | lineage2.2.1 | None | SRR18003004 | Pre-XDR-TB | lineage2.2.2 | None | SRR18911231 | Sensitive | lineage4.1.1.3 | None | SRR18910194 | HR-TB | lineage2.2 | None | SRR18213736 | MDR-TB | lineage3 | None | SRR6650321 | Sensitive | lineage1.2.2.2 | None | SRR22175249 | Pre-XDR-TB | lineage2.2.1 | None | SRR19295647 | Sensitive | lineage4.9 | None | ERR176779 | HR-TB | None | SAMEA3501065 | RR-TB | lineage4.8 | None | ERR176778 | HR-TB | None | ERR4815298 | Other | lineage4.3.4.2.1 | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | ERR4814617 | Other | lineage1.1.3.1 | None | ERR4814312 | Other | lineage4 | None | ERR4814356 | Pre-XDR-TB | lineage3.1.2 | None | ERR4814748 | Other | lineage4.8 | None | ERR702405 | Sensitive | lineage2.1 | None | ERR4815502 | Other | lineage4.1 | None | ERR4814763 | Other | lineage2.2.1 | None | SRR3675246 | Sensitive | lineage4 | None | ERR181887 | HR-TB | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | ERR4814896 | Other | lineage2.2.1.1 | None | ERR176651 | HR-TB | None | SRR3675509 | Other | lineage4.9 | None | ERR4816944 | RR-TB | lineage2.2 | None | ERR2027290 | RR-TB | lineage3.1 | None | ERR4815901 | Other | lineage2.2 | None | ERR4816967 | RR-TB | lineage5 | None | ERR4817464 | Other | lineage3.1.1 | None | ERR4816232 | Other | lineage4 | None | ERR4816183 | Other | None | SRR5341422 | HR-TB | lineage2.1 | None | SRR3675552 | RR-TB | lineage4.9 | None | ERR4816476 | Other | lineage3.1.2.1 | None | ERR212125 | HR-TB | lineage4 | None | ERR4817964 | RR-TB | lineage4.1.2.1 | gb | SRR5341384 | Sensitive | lineage4.9 | None | ERR4816745 | Pre-XDR-TB | lineage2.2.1 | None | ERR4815811 | HR-TB | lineage4.2.1.1 | None | ERR4816466 | HR-TB | None | ERR4817131 | Pre-XDR-TB | None | ERR4816610 | RR-TB | lineage4.3.3 | None | ERR2512986 | Other | lineage3 | None | ERR4818785 | RR-TB | lineage4.1.2.1 | None | ERR4819011 | Other | lineage3.1.2.1 | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR4818797 | Other | lineage4.5 | None | ERR2515055 | Other | lineage3 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4819051 | Other | lineage4 | None | ERR2512606 | MDR-TB | lineage3 | None | ERR4818259 | RR-TB | lineage4.1.1 | None | ERR4818265 | Other | lineage4.1.2.1 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | ERR4818393 | RR-TB | lineage3 | None | ERR4818561 | HR-TB | lineage4 | None | ERR4818522 | Pre-XDR-TB | lineage3 | None | SRR5007161 | RR-TB | lineage4.1.1.3.1 | None | SRR5007170 | RR-TB | lineage4.9 | None | SRR5007165 | MDR-TB | lineage3 | None | ERR4817584 | MDR-TB | lineage3 | None | ERR2512849 | RR-TB | lineage1.1.3.1 | None | SRR5341453 | Sensitive | None | ERR4817569 | Other | lineage4.3.4.1 | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341373 | HR-TB | lineage4 | None | SRR5341375 | Other | lineage4.9 | None | SAMEA3501067 | RR-TB | lineage4.8 | None | ERR4820324 | Other | lineage4 | None | SRR5341387 | Other | lineage4 | None | ERR4820266 | RR-TB | lineage3 | None | ERR2513830 | RR-TB | lineage4.8 | None | ERR4819307 | RR-TB | lineage4 | None | ERR4820265 | Other | lineage4.1.2.1 | None | ERR4819265 | HR-TB | lineage4.3.4.1 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341425 | Other | lineage4 | None | ERR4819706 | MDR-TB | lineage4.3.4.2 | None | ERR4819456 | Other | lineage4.8 | None | ERR4820777 | Other | lineage4.1.2.1 | None | ERR4819528 | RR-TB | lineage3 | None | ERR4820746 | RR-TB | lineage3 | None | ERR4819546 | HR-TB | lineage3 | None | ERR4820410 | Pre-XDR-TB | lineage3.1.1 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | ERR4819772 | RR-TB | lineage1.1.3.1 | None | SRR5341293 | HR-TB | lineage4 | None | ERR4819784 | Other | lineage4.1.2.1 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | ERR2514645 | Other | lineage4.3.4.1 | None | SRR5341313 | HR-TB | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | SRR5341303 | RR-TB | lineage4 | None | ERR4820833 | HR-TB | None | SRR5341310 | Other | lineage1.1.2 | None | SRR5341315 | Sensitive | None | SAMEA3501052 | RR-TB | lineage4.8 | None | SRR5341467 | Other | lineage4 | None | ERR4820968 | Other | lineage4.1.2.1 | gb | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341469 | Other | lineage4 | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | ERR4821176 | Pre-XDR-TB | lineage2.2.1 | None | ERR4822104 | RR-TB | lineage3 | None | ERR4821365 | Other | La1.8.1 | None | ERR4821214 | RR-TB | None | SRR6044841 | Other | lineage4.9 | None | ERR4821655 | Sensitive | lineage4 | None | SRR6044780 | Other | lineage4.9 | None | SRR6045957 | Other | lineage4.9 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6045928 | Other | lineage4.9 | None | SRR6045045 | Other | lineage2.2.1 | None | SRR6045010 | Other | lineage4 | None | SRR6045191 | Sensitive | lineage4.9 | None | SRR6046362 | HR-TB | None | SRR6045267 | RR-TB | lineage4 | None | SRR6046737 | Other | lineage4.9 | None | SRR6046385 | Other | lineage4.9 | None | ERR4829039 | RR-TB | lineage4.3.1 | None | ERR4829530 | Pre-XDR-TB | lineage4.8 | None | ERR4829816 | RR-TB | lineage4.4.1.1 | None | SRR6046460 | HR-TB | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | SRR6511621 | HR-TB | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR502510 | Sensitive | lineage4 | None | ERR4831618 | MDR-TB | lineage2.1 | None | SRR7496471 | Sensitive | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | SRR7496523 | Other | lineage4.7 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR7535082 | Sensitive | lineage4 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR8651633 | Pre-XDR-TB | lineage4.4.2 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None | SRR9971112 | Other | lineage2.2.1 | None | ERR323066 | Sensitive | lineage4 | None | ERR323107 | Other | lineage4 | None | ERR323045 | HR-TB | None | ERR1035122 | Sensitive | None | ERR323108 | HR-TB | lineage4 | None | ERR1034634 | HR-TB | None | ERR323085 | Sensitive | lineage4 | None | ERR137286 | Sensitive | lineage4 | None | ERR1063859 | HR-TB | None | ERR1063883 | Sensitive | lineage4 | None | ERR1063896 | Sensitive | None | ERR10796598 | RR-TB | lineage4.9 | None | ERR3445501 | HR-TB | None | ERR323115 | Sensitive | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283021 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR4024991 | Other | None | ERR3445503 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR4553558 | MDR-TB | None |
|---|
