Rv0668 - c.3000C>G
Drug resistance types
39 Sensitive
1 RR-TB
88 HR-TB
10 MDR-TB
8 Pre-XDR-TB
0 XDR-TB
58 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 39 |
| 57 | |
| lineage4 | 42 |
| lineage2.2.1 | 11 |
| lineage2.2.1.1 | 4 |
| lineage1.2.1.2 | 1 |
| lineage2.2 | 6 |
| La1.7.1 | 1 |
| La1.4 | 1 |
| lineage3 | 7 |
| lineage4.9;lineage4.6.3 | 1 |
| lineage4.1 | 1 |
| lineage4.6.2.2 | 3 |
| lineage4.1.1.3 | 2 |
| lineage4.3.4.2.1 | 2 |
| lineage4.8 | 2 |
| lineage2.1 | 1 |
| lineage3.1.2.1 | 1 |
| lineage4;lineage2 | 1 |
| lineage1.1.2 | 2 |
| lineage5.1.4 | 1 |
| lineage1.1.1 | 1 |
| lineage4.1.2.1 | 3 |
| lineage4.3.4.1 | 2 |
| La2 | 1 |
| lineage4.4.1.2 | 1 |
| lineage4.1.2.1;lineage2.2.1 | 1 |
| lineage4;lineage3.1 | 1 |
| lineage4.9;La1.3 | 1 |
| La1.3 | 1 |
| lineage3.1.2 | 1 |
| lineage4.5 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4.3.4 | 1 |
| lineage4.8;lineage4.1 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 204 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1173633 | HR-TB | lineage4.9 | None | SRR1172885 | HR-TB | lineage4.9 | None | SRR1172310 | HR-TB | None | SRR1175496 | HR-TB | lineage4.9 | None | SRR1173788 | Other | None | SRR1174897 | HR-TB | None | SRR1175052 | HR-TB | lineage4.9 | None | SRR1175508 | Other | lineage4.9 | None | SRR1175500 | MDR-TB | lineage4 | None | SRR1175507 | MDR-TB | lineage4 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1180147 | Other | lineage2.2.1.1 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1180446 | Other | lineage4.9 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR12006550 | Other | lineage1.2.1.2 | None | SRR1183049 | Other | lineage2.2 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR13423649 | Sensitive | lineage2.2.1 | None | SRR16278274 | Other | La1.4 | None | SRR17658565 | Other | lineage3 | None | SRR26159047 | Other | lineage4.9;lineage4.6.3 | None | SRR2010299 | Pre-XDR-TB | lineage2.2.1 | None | SRR12708416 | Sensitive | lineage4.1 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | ERR11082350 | MDR-TB | lineage4.6.2.2 | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675473 | Sensitive | lineage4.9 | None | ERR176778 | HR-TB | None | ERR176779 | HR-TB | None | SRR3675477 | Other | lineage4.9 | None | ERR550636 | MDR-TB | lineage4.1.1.3 | None | ERR3275450 | Other | lineage4 | None | ERR4814639 | HR-TB | lineage4 | None | ERR4815310 | Other | None | ERR161034 | Other | lineage4.3.4.2.1 | None | SRR3675229 | Other | lineage4 | None | ERR181824 | HR-TB | lineage4 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675312 | HR-TB | lineage4 | None | SRR3675280 | HR-TB | lineage4.9 | None | SRR3675279 | Other | None | SRR3675284 | HR-TB | lineage4.9 | None | ERR4815550 | Other | lineage4 | None | ERR176651 | HR-TB | None | ERR181887 | HR-TB | None | ERR176740 | HR-TB | None | SRR3675387 | Sensitive | None | SRR3675456 | HR-TB | None | SRR3675547 | Other | lineage4.9 | None | SRR3675522 | Other | None | SRR3675510 | Other | None | ERR212125 | HR-TB | lineage4 | None | ERR4816322 | Other | lineage4.9 | None | SRR3675548 | Sensitive | lineage4.9 | None | ERR4816151 | Other | lineage4.8 | None | ERR212001 | HR-TB | None | SRR5341422 | HR-TB | lineage2.1 | None | SRR3675555 | HR-TB | None | ERR212138 | HR-TB | lineage4 | None | SRR3675577 | Sensitive | lineage4.9 | None | ERR4816656 | HR-TB | None | SRR3675571 | HR-TB | None | ERR4816717 | RR-TB | lineage3.1.2.1 | None | ERR4816755 | Other | lineage4.1.1.3 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4816852 | Other | lineage4.9 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4817667 | HR-TB | lineage4.8 | None | SRR5341373 | HR-TB | lineage4 | None | ERR4819051 | Other | lineage4 | None | ERR4818536 | Other | lineage4.9 | None | ERR4818561 | HR-TB | lineage4 | None | ERR245675 | Sensitive | lineage1.1.2 | None | ERR2513229 | MDR-TB | lineage2.2.1 | None | ERR4818929 | HR-TB | None | ERR2513283 | Other | lineage5.1.4 | None | SRR5341400 | HR-TB | lineage4 | None | ERR4819314 | Other | lineage1.1.1 | None | SRR5341408 | Sensitive | lineage3 | None | SRR5341437 | Sensitive | lineage4.9 | None | ERR4819462 | Other | lineage4 | None | ERR4819546 | HR-TB | lineage3 | None | SRR5341432 | HR-TB | lineage4 | None | ERR2514552 | Sensitive | lineage3 | None | SRR5341313 | HR-TB | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341296 | Sensitive | lineage4.9 | None | ERR2446382 | Other | lineage4 | None | SRR5341315 | Sensitive | None | SRR6046151 | Sensitive | lineage4.9 | None | ERR2693231 | Other | None | SRR5341470 | HR-TB | None | SRR5341323 | Sensitive | lineage4 | None | ERR4820833 | HR-TB | None | SRR5341345 | Sensitive | lineage4.9 | None | ERR2517475 | Other | lineage4 | None | SRR6044780 | Other | lineage4.9 | None | SRR6046397 | Other | None | SRR6045217 | Other | lineage4 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6046245 | Other | lineage4.9 | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6045010 | Other | lineage4 | None | SRR6046644 | HR-TB | None | SRR6046611 | HR-TB | lineage4.9 | None | ERR11465351 | Sensitive | lineage4.1.2.1 | None | SRR6046737 | Other | lineage4.9 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR4831638 | Sensitive | None | ERR323037 | HR-TB | lineage4 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR323053 | HR-TB | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | ERR502943 | HR-TB | None | SRR7535086 | Other | None | ERR294266 | HR-TB | None | ERR502524 | HR-TB | La2 | None | ERR323039 | HR-TB | None | ERR323045 | HR-TB | None | ERR3283040 | HR-TB | None | ERR1034634 | HR-TB | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | ERR3283025 | HR-TB | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323108 | HR-TB | lineage4 | None | ERR11488822 | Pre-XDR-TB | lineage4.1.2.1;lineage2.2.1 | None | ERR067712 | HR-TB | lineage4 | None | ERR1023525 | HR-TB | lineage4 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063857 | HR-TB | None | ERR1063862 | HR-TB | None | ERR1063858 | HR-TB | None | ERR1063859 | HR-TB | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR3445501 | HR-TB | None | ERR3445502 | HR-TB | lineage4 | None | ERR3445503 | HR-TB | None | ERR400326 | Sensitive | lineage4 | None | ERR400336 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR3797015 | HR-TB | None | ERR3797063 | HR-TB | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797086 | Other | lineage4.9 | None | ERR400320 | Sensitive | lineage4 | None | ERR4596902 | HR-TB | lineage3 | None | ERR473332 | Other | lineage4 | None | ERR4797313 | HR-TB | None | ERR4769419 | Other | lineage4.9 | None | ERR4769442 | HR-TB | lineage4 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4769474 | HR-TB | lineage4 | None | ERR4769493 | Pre-XDR-TB | lineage4.9;La1.3 | None | ERR4769495 | Other | La1.3 | None | ERR4769521 | HR-TB | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797350 | Sensitive | lineage4.9 | None | ERR4797588 | MDR-TB | lineage3 | None | ERR4798139 | Sensitive | lineage1.1.2 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4800527 | MDR-TB | lineage2.2.1 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4799025 | Pre-XDR-TB | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4811030 | Sensitive | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR4812155 | Sensitive | None | ERR7821163 | Other | lineage2.2.1 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736837 | Other | lineage4.9 | None | ERR736835 | HR-TB | None | ERR736848 | HR-TB | None | ERR736865 | HR-TB | None | ERR736875 | HR-TB | lineage4 | None | ERR6359045 | HR-TB | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR6866807 | HR-TB | lineage4 | None | ERR702404 | HR-TB | None | ERR736831 | HR-TB | lineage4.9 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR176675 | Sensitive | lineage4.3.4.2.1 | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | ERR9786843 | Other | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | ERR9119669 | HR-TB | None | ERR987722 | HR-TB | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR990545 | Other | lineage3 | None | SRR10809074 | Sensitive | lineage4 | None |
|---|
