Rv0668 - c.3000C>G


Drug resistance types
32 Sensitive 7 RR-TB 60 HR-TB 21 MDR-TB 5 Pre-XDR-TB 2 XDR-TB 38 Other
lineage Counts
lineage Count
lineage4.9 61
5
lineage1.1.2 2
lineage3 6
lineage4.4.1.2 1
lineage2.1;lineage4.9;lineage6.3 1
lineage2.2.1;lineage4.1.2.1 1
lineage2.2.1.1 4
lineage4.2;lineage4.8.1;lineage4.9 2
lineage4.1.2.1 2
La1.7;lineage4.9;lineage7 3
lineage2.2.1 9
lineage4.6.3;lineage4.9 2
lineage4.2;lineage4.9 3
lineage4.1;lineage4.8 1
lineage1.2.1.2 1
lineage1.1.1 1
lineage4.6.1.1 1
La2;lineage2.2 1
lineage3.1.2.1 1
La2;lineage4.9 2
La1.6;La3;lineage4.6.4;lineage4.9 1
lineage4.8 2
La1.7;lineage3.1;lineage4 1
La1.3 1
La1.7;lineage4.9 7
La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 1
La2;lineage4.9;lineage9 1
lineage4 2
lineage4.3.4.1 2
La1.4 1
lineage4.9;lineage7 2
La1.7;M.canetti;lineage4.9 1
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 1
lineage2.1;lineage4.9;lineage7 1
La3;lineage4.9 1
lineage2.2 3
La3;M.canetti;lineage4.9 1
lineage4.6.2.2 4
lineage4.9;lineage9 2
lineage1;lineage4.9 2
lineage3.1.2.2 1
La1.7.1;La1.7.X-unk4 1
La1.7.1;lineage4.9 1
La1.7.1;La1.7.X-unk4;lineage7 1
La1.7;lineage3;lineage4.9;lineage7 1
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
M.canetti;lineage2.2 2
lineage4.3.2;lineage4.9 1
lineage4.9;lineage6.3 1
M.canetti;lineage4.2;lineage4.9 1
lineage3.1.2.1;lineage3.1.2.2 1
lineage4.3.4 1
lineage4.3.4.2.1 2
lineage4.1.1.3 1
La1.7.1 1
lineage4.4.1.1 1
spoligotype Counts
spoligotype Count
None 165
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4814639 HR-TB lineage4.9 None
ERR485006 HR-TB lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR176779 HR-TB lineage4.9 None
SRR7535086 Other None
ERR4798139 RR-TB lineage1.1.2 None
ERR4819546 HR-TB lineage3 None
ERR1063849 HR-TB lineage4.9 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR702404 HR-TB lineage2.1;lineage4.9;lineage6.3 None
ERR11488822 Pre-XDR-TB lineage2.2.1;lineage4.1.2.1 None
SRR1184024 RR-TB lineage2.2.1.1 None
SRR1183111 HR-TB lineage4.9 None
SRR6045785 MDR-TB lineage4.2;lineage4.8.1;lineage4.9 None
ERR5311094 HR-TB lineage4.9 None
ERR9786656 Sensitive lineage4.1.2.1 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR1183144 Other lineage2.2.1 None
SRR1183106 RR-TB lineage2.2.1.1 None
ERR4800527 MDR-TB lineage2.2.1 None
ERR9786843 Other None
SRR26159047 Other lineage4.6.3;lineage4.9 None
ERR212001 HR-TB None
SRR28044873 Pre-XDR-TB lineage3 None
SRR10808730 Other lineage4.9 None
ERR181824 HR-TB lineage4.9 None
SRR6046295 HR-TB lineage4.2;lineage4.9 None
ERR4819462 Sensitive lineage4.9 None
SRR1180226 HR-TB lineage4.9 None
ERR9786525 Other lineage4.1;lineage4.8 None
SRR12006550 Sensitive lineage1.2.1.2 None
ERR6866807 Other lineage4.9 None
SRR29096410 Other lineage4.9 None
ERR4819314 Other lineage1.1.1 None
ERR4819241 Other lineage4.9 None
ERR176651 Other lineage4.9 None
SRR6045359 Sensitive lineage4.9 None
SRR1175052 HR-TB lineage4.9 None
ERR6358755 Other lineage4.6.1.1 None
ERR1063839 MDR-TB La2;lineage2.2 None
ERR9119669 HR-TB lineage4.9 None
SRR5341432 Sensitive La1.7;lineage4.9;lineage7 None
ERR4816717 RR-TB lineage3.1.2.1 None
ERR323039 HR-TB La2;lineage4.9 None
ERR11465351 Sensitive lineage4.1.2.1 None
ERR2693231 Other La1.6;La3;lineage4.6.4;lineage4.9 None
SRR6045548 Sensitive lineage4.9 None
ERR4799025 Other lineage4.8 None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR5341345 Sensitive lineage4.9 None
ERR181887 Other lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
SRR13423649 Sensitive lineage2.2.1 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR4769495 Other La1.3 None
ERR4797588 MDR-TB lineage3 None
ERR216938 HR-TB La1.7;lineage4.9 None
SRR29096174 Sensitive La1.7;lineage4.9 None
SRR6046644 HR-TB La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 None
ERR4815441 HR-TB lineage4.9 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR323053 MDR-TB La2;lineage4.9;lineage9 None
ERR323037 Other lineage4.9 None
SRR1172885 HR-TB lineage4.9 None
ERR4816478 HR-TB lineage4 None
ERR4816656 Other lineage4.9 None
SRR1180172 Other lineage2.2.1 None
SRR26937107 MDR-TB lineage2.2.1 None
ERR11465353 Sensitive lineage4.3.4.1 None
SRR29097026 Other lineage4.9 None
SRR16278274 Other La1.4 None
ERR212125 HR-TB lineage4.9 None
ERR7821163 Other lineage2.2.1 None
SRR1180147 Other lineage2.2.1.1 None
SRR12708416 Sensitive None
SRR2010299 MDR-TB lineage2.2.1 None
ERR245675 Sensitive lineage1.1.2 None
ERR987722 MDR-TB None
ERR3445502 Sensitive lineage4.9;lineage7 None
ERR4819422 HR-TB lineage4.9 None
ERR736835 HR-TB La1.7;M.canetti;lineage4.9 None
SRR6046397 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 None
SRR3675555 HR-TB lineage2.1;lineage4.9;lineage7 None
SRR3675510 Sensitive La3;lineage4.9 None
SRR6045217 Sensitive lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
SRR6045010 Sensitive lineage4.9 None
SRR1180137 Other lineage2.2.1 None
ERR4816762 Sensitive lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
ERR4811030 Sensitive lineage4.9 None
ERR4810624 MDR-TB lineage2.2 None
SRR1183049 RR-TB lineage2.2 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
ERR4820773 HR-TB lineage4.9 None
ERR4817667 HR-TB lineage4.8 None
SRR3675231 MDR-TB lineage4.9;lineage7 None
ERR736837 Pre-XDR-TB lineage4.9 None
SRR14801759 HR-TB La1.7;lineage4.9 None
ERR13278785 MDR-TB lineage4.6.2.2 None
SRR10809074 Sensitive lineage4.9 None
SRR1174897 MDR-TB lineage4.9;lineage9 None
ERR3283030 HR-TB lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
ERR4819051 Sensitive lineage4.9 None
ERR4816852 Other lineage4.9 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR4798648 MDR-TB lineage3.1.2.2 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
SRR5341470 MDR-TB lineage4.9;lineage9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
ERR4596902 MDR-TB lineage3 None
ERR990545 Other lineage3 None
ERR4819877 HR-TB lineage4.9 None
ERR212138 HR-TB lineage4.9 None
ERR4817731 HR-TB lineage4.9 None
ERR4769493 Other lineage4.9 None
SRR1181091 Other lineage2.2.1.1 None
SRR3675229 Sensitive lineage4.9 None
ERR3445501 HR-TB La1.7.1;La1.7.X-unk4;lineage7 None
SRR29096150 Other lineage4.9 None
ERR11465352 Sensitive lineage4.3.4.1 None
ERR1034634 HR-TB lineage4.9 None
SRR29096246 Sensitive La1.7;lineage4.9 None
ERR4799513 HR-TB lineage2.2 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
ERR4815815 Sensitive lineage4.9 None
ERR736831 Other lineage4.9 None
SRR29097037 Other lineage4.9 None
SRR6046026 RR-TB lineage4.2;lineage4.9 None
ERR11252558 Other lineage4.6.3;lineage4.9 None
ERR3283025 MDR-TB La1.7;lineage4.9 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR4818536 Other lineage4.9 None
ERR176778 HR-TB lineage4.9 None
ERR7911670 XDR-TB M.canetti;lineage2.2 None
ERR736875 HR-TB lineage4.9 None
ERR736865 HR-TB lineage4.3.2;lineage4.9 None
ERR4831545 XDR-TB M.canetti;lineage2.2 None
ERR502524 HR-TB lineage4.9;lineage6.3 None
ERR4797350 Sensitive lineage1;lineage4.9 None
ERR4798823 HR-TB lineage4 None
ERR4816322 Other lineage4.9 None
ERR4828872 Sensitive lineage4.2;lineage4.9 None
ERR11082350 MDR-TB lineage4.6.2.2 None
ERR4818929 HR-TB lineage4.9 None
SRR3675571 HR-TB M.canetti;lineage4.2;lineage4.9 None
SRR1172310 HR-TB lineage4.9 None
ERR987729 HR-TB lineage3.1.2.1;lineage3.1.2.2 None
ERR736817 HR-TB lineage4.3.4 None
ERR161034 HR-TB lineage4.3.4.2.1 None
ERR550636 MDR-TB lineage4.1.1.3 None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
SRR1792478 HR-TB La1.7.1 None
ERR323108 HR-TB La1.7;lineage4.9 None
SRR3675455 Sensitive lineage4.9 None
SRR17658565 Pre-XDR-TB lineage3 None
ERR067712 Sensitive lineage4.9 None
ERR176675 Sensitive lineage4.3.4.2.1 None
ERR3797015 HR-TB lineage4.9 None
SRR12708398 Sensitive lineage4.4.1.1 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR4769474 HR-TB lineage4.9 None
ERR294266 HR-TB lineage4.2;lineage4.8.1;lineage4.9 None