Rv0006 - c.1722A>C


Drug resistance types
93 Sensitive 7 RR-TB 177 HR-TB 18 MDR-TB 8 Pre-XDR-TB 0 XDR-TB 125 Other
lineage Counts
lineage Count
lineage4.9 65
171
lineage4 71
lineage4.2.1 3
lineage2.2.1 26
lineage1.1 1
lineage4.1.2.1 9
lineage5.2 2
lineage2.2 11
lineage4.6.2.2 5
lineage4.2.1.1 1
lineage4.1 4
lineage4.3.4.2.1 3
La2 1
lineage4.1.2 2
lineage4.3.2.1 1
lineage4.8 4
lineage4.4.1.2 1
lineage4.6.1.1 2
lineage6.1.1 2
La1.2 1
lineage4;lineage3.1 1
lineage2 2
La1 1
lineage3.1.2 1
lineage3 4
lineage4.8;La3 1
lineage4.5 2
lineage4.3.3 3
lineage4.3.4 2
lineage4.9.1 1
lineage1.1.2 1
lineage1.1.3.2 1
lineage1.1.3.1 1
lineage3.1.2.2;lineage3.1.2.1 1
La1.8.1 2
lineage4.4.1.1 1
lineage2.2.1.2 1
lineage4.4.1.1.1 1
lineage7;lineage2.2.1.2 1
lineage1.1.1 2
La1.7.1 1
lineage6.3;lineage4.9;lineage2.1 1
lineage4.9;La3 1
lineage4.2;La1.7 1
lineage4.9;lineage4.6.3 1
lineage6.3;lineage2.2.1 1
lineage3;lineage2.1 1
lineage1.2.1.1 1
lineage2.1 1
lineage3.1.3 1
lineage4;lineage2 1
lineage4.1.1 1
spoligotype Counts
spoligotype Count
None 428
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR6044875 HR-TB lineage4.9 None
SRR6044890 Other lineage4.9 None
SRR6045952 HR-TB None
SRR6046046 Other None
SRR6045053 Other None
SRR6045217 Other lineage4 None
SRR6045327 HR-TB None
SRR6045233 HR-TB None
SRR6045359 Sensitive lineage4.9 None
SRR6045399 Other None
SRR6045371 Sensitive lineage4.2.1 None
SRR6046253 HR-TB lineage4.9 None
SRR6046225 HR-TB None
SRR6046245 Other lineage4.9 None
SRR6046460 HR-TB None
SRR6046299 HR-TB None
SRR6046362 HR-TB None
ERR4830353 Other None
SRR6046259 Sensitive lineage4.9 None
SRR6046382 HR-TB lineage2.2.1 None
ERR2851356 Sensitive lineage4.9 None
SRR6046482 HR-TB None
SRR6046492 Other None
SRR6046644 HR-TB None
SRR6046594 HR-TB lineage4 None
SRR6046611 HR-TB lineage4.9 None
SRR6046514 HR-TB None
SRR6046824 HR-TB None
SRR6046878 HR-TB lineage4 None
ERR3077978 Other lineage1.1 None
SRR6511621 HR-TB None
SRR6458423 HR-TB lineage2.2.1 None
SRR6397654 HR-TB lineage4.1.2.1 None
ERR4872094 MDR-TB lineage5.2 None
ERR4831117 HR-TB None
ERR4831545 Pre-XDR-TB lineage2.2 None
ERR4872119 MDR-TB lineage4.6.2.2 None
ERR4831638 Sensitive None
ERR4831546 HR-TB lineage2.2 None
ERR4831617 MDR-TB lineage2.2.1 None
ERR4831719 MDR-TB lineage2.2.1 None
SRR6832249 Other lineage2.2.1 None
SRR6832178 HR-TB lineage4.2.1.1 None
ERR294248 HR-TB None
SRR6789626 Other None
SRR6789624 MDR-TB lineage4.1 None
ERR502510 Sensitive lineage4 None
SRR6832787 RR-TB lineage2.2.1 None
ERR11465510 Sensitive lineage4.3.4.2.1 None
ERR502524 HR-TB La2 None
ERR502889 Other None
ERR502943 HR-TB None
SRR9970980 Other lineage4.1.2 None
ERR5311099 HR-TB None
ERR5311090 HR-TB None
ERR5311081 HR-TB None
SRR7131023 Other lineage4.1.2.1 None
SRR8217918 HR-TB None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR7535082 Sensitive lineage4 None
SRR9970978 Sensitive lineage4.1.2 None
SRR9970979 Sensitive lineage4.8 None
SRR9971112 Other lineage2.2.1 None
SRR9971114 Other lineage2.2.1 None
ERR323039 HR-TB None
ERR323053 HR-TB None
ERR323045 HR-TB None
ERR323108 HR-TB lineage4 None
ERR323066 Sensitive lineage4 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR067699 HR-TB lineage4 None
ERR11465509 Sensitive lineage4.3.4.2.1 None
ERR067681 HR-TB None
ERR1023525 HR-TB lineage4 None
ERR1035122 Sensitive None
ERR1034652 Other None
ERR1063839 HR-TB lineage2.2 None
ERR1063858 HR-TB None
ERR1063862 HR-TB None
ERR1063857 HR-TB None
ERR1063859 HR-TB None
ERR108125 Pre-XDR-TB lineage4.9 None
ERR1063896 Sensitive None
ERR108471 HR-TB lineage4 None
ERR11465511 Sensitive lineage4.3.4.2.1 None
ERR133986 HR-TB None
ERR1199132 Sensitive lineage4.6.1.1 None
ERR133825 Sensitive lineage4 None
ERR3283017 HR-TB None
ERR137286 Sensitive lineage4 None
ERR3273109 MDR-TB lineage4 None
ERR3283014 HR-TB None
ERR3283024 Other None
ERR3283021 HR-TB None
ERR3283025 HR-TB None
ERR3283028 Other None
ERR3283032 HR-TB None
ERR3283047 HR-TB None
ERR3283031 HR-TB None
ERR3445504 HR-TB None
ERR3283058 Other lineage4.9 None
ERR3283055 HR-TB None
ERR3283057 HR-TB lineage4 None
ERR3439432 Other None
ERR369151 Sensitive lineage4.9 None
ERR3445501 HR-TB None
ERR3468544 HR-TB None
ERR363456 Sensitive lineage4 None
ERR3445502 HR-TB lineage4 None
ERR3445503 HR-TB None
ERR363509 Sensitive lineage4 None
ERR3797016 HR-TB None
ERR373945 HR-TB lineage4 None
ERR369156 Sensitive lineage4.9 None
ERR369157 Sensitive lineage4.9 None
ERR3797024 Other lineage4.9 None
ERR3797014 Other None
ERR3797015 HR-TB None
ERR3797043 HR-TB None
ERR3797017 Other None
ERR3797063 HR-TB None
ERR3797046 HR-TB None
ERR3797036 HR-TB None
ERR3797047 HR-TB lineage4 None
ERR3797048 HR-TB None
ERR3797065 MDR-TB lineage4 None
ERR3797061 Other None
ERR3797044 Other None
ERR3797064 Sensitive None
ERR3797079 Sensitive lineage4 None
ERR3797080 HR-TB lineage4.9 None
ERR400345 Other lineage4 None
ERR3797087 Sensitive lineage4 None
ERR387051 HR-TB None
ERR400336 Sensitive lineage4 None
ERR3797086 Other lineage4.9 None
ERR3799304 Other lineage6.1.1 None
ERR3801503 Sensitive lineage4.6.2.2 None
ERR3804155 Other lineage4.1.2.1 None
ERR3806850 HR-TB lineage4.1.2.1 None
ERR400320 Sensitive lineage4 None
ERR400326 Sensitive lineage4 None
ERR403298 HR-TB lineage4 None
ERR4769497 HR-TB La1.2 None
ERR405219 HR-TB lineage4;lineage3.1 None
ERR4769452 HR-TB None
ERR4769457 Other lineage4.9 None
ERR4769474 HR-TB lineage4 None
ERR405209 Sensitive lineage4 None
ERR4188350 HR-TB None
ERR4407463 HR-TB None
ERR473323 HR-TB lineage4.9 None
ERR473332 Other lineage4 None
ERR4769450 HR-TB None
ERR4796254 Sensitive lineage4 None
ERR4769521 HR-TB None
ERR4797184 Sensitive lineage4 None
ERR4797054 Pre-XDR-TB lineage2 None
ERR4797350 Sensitive lineage4.9 None
ERR4797264 Sensitive None
ERR4797313 HR-TB None
ERR4797474 Other None
ERR4798406 HR-TB None
ERR4798262 HR-TB La1 None
ERR4798099 Other None
ERR4799025 Pre-XDR-TB None
ERR4798648 HR-TB lineage3.1.2 None
ERR4798504 Other lineage3 None
ERR4798823 HR-TB lineage4 None
ERR4799547 Sensitive lineage2.2.1 None
ERR4799171 Pre-XDR-TB lineage4.8 None
ERR4799513 HR-TB lineage2.2 None
ERR4799378 Sensitive lineage4 None
ERR4810624 HR-TB lineage2.2 None
ERR12015083 Other lineage4.8;La3 None
ERR6866410 Sensitive None
ERR4811022 HR-TB None
ERR4811493 HR-TB None
ERR6359069 Other lineage4.9 None
ERR6359074 HR-TB lineage4.9 None
ERR4810741 HR-TB None
ERR4811031 Sensitive lineage4.5 None
ERR4811030 Sensitive None
ERR4811105 HR-TB None
ERR4811142 MDR-TB None
ERR4812155 Sensitive None
ERR5908228 Other lineage4.3.3 None
ERR6866639 Other None
ERR6866547 Sensitive lineage4 None
ERR736856 HR-TB lineage4 None
ERR6866807 HR-TB lineage4 None
ERR736817 HR-TB lineage4.3.4 None
ERR736834 Sensitive lineage4 None
ERR245758 Other lineage4.9.1 None
ERR736835 HR-TB None
ERR736875 HR-TB lineage4 None
ERR736865 HR-TB None
ERR736872 Sensitive lineage4 None
ERR9117721 HR-TB lineage1.1.2 None
ERR736874 HR-TB None
ERR751326 Sensitive lineage4 None
ERR7821126 Sensitive lineage1.1.3.2 None
ERR7911670 Pre-XDR-TB lineage2.2 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR8976043 HR-TB None
ERR9119096 Other lineage4.3.3 None
ERR9119525 MDR-TB lineage4.6.2.2 None
ERR9119500 MDR-TB lineage5.2 None
ERR9786642 Other lineage4.1.2.1 None
ERR9119669 HR-TB None
ERR9786444 Sensitive lineage4.8 None
ERR9786604 Other None
ERR9786601 Other lineage4.1.2.1 None
ERR9786711 Sensitive lineage4.6.2.2 None
ERR9786645 Other lineage4.6.2.2 None
ERR9786671 Other None
ERR987729 HR-TB lineage3.1.2.2;lineage3.1.2.1 None
ERR9786843 Other None
ERR9786911 HR-TB lineage4.1.2.1 None
ERR9787014 Other lineage6.1.1 None
ERR9786986 HR-TB lineage4.1.2.1 None
ERR987722 HR-TB None
ERR990545 Other lineage3 None
ERR987765 Sensitive lineage4.6.1.1 None
SRR1049674 HR-TB lineage2.2.1 None
SRR10315567 Other lineage2.2.1 None
SRR1049675 HR-TB lineage2.2.1 None
SRR10808399 Sensitive lineage4 None
SRR1062919 HR-TB lineage2.2.1 None
SRR1158918 Sensitive lineage4 None
SRR1140724 HR-TB lineage2.2.1 None
SRR11462861 Other La1.8.1 None
SRR1169194 Other None
SRR1173400 Other None
SRR1172310 HR-TB None
SRR1173384 Other lineage4 None
SRR1172951 Other None
SRR1173778 Other None
SRR1173633 HR-TB lineage4.9 None
SRR1173453 Other lineage4.4.1.1 None
SRR1173629 Other None
SRR1175127 Sensitive lineage2.2.1.2 None
SRR1173788 Other None
SRR1174897 HR-TB None
SRR1175074 MDR-TB None
SRR1175487 Sensitive lineage4.9 None
SRR1175496 HR-TB lineage4.9 None
SRR1180137 Other lineage2.2.1 None
SRR1175500 MDR-TB lineage4 None
SRR1175507 MDR-TB lineage4 None
SRR1175508 Other lineage4.9 None
SRR1175513 Other lineage4.9 None
SRR1181349 Sensitive lineage4.4.1.1.1 None
SRR1181020 Other lineage2.2.1 None
SRR1181289 Other lineage2.2.1 None
SRR1181237 Sensitive lineage2.2 None
SRR1183049 Other lineage2.2 None
SRR1184294 HR-TB None
SRR1183145 Other lineage2.2.1 None
SRR1196546 HR-TB None
SRR1184388 Other None
SRR1184312 HR-TB lineage2.2.1 None
SRR1184380 HR-TB None
SRR1196566 HR-TB None
SRR11972367 Sensitive lineage2.2.1 None
SRR13861629 RR-TB lineage4.9 None
SRR12142341 HR-TB None
SRR12416840 MDR-TB lineage4.9 None
SRR13423544 Other lineage4.5 None
SRR13861500 RR-TB lineage4.9 None
SRR13423649 Sensitive lineage2.2.1 None
SRR13837824 Other lineage4.9 None
SRR13861372 Other lineage4.9 None
SRR13861571 RR-TB lineage4.9 None
SRR13861686 RR-TB lineage4.9 None
SRR18549032 HR-TB lineage7;lineage2.2.1.2 None
SRR14066533 Sensitive lineage1.1.1 None
SRR15368973 Other None
SRR1791747 Other La1.8.1 None
SRR18003019 Other lineage2.2.1 None
SRR14801749 Sensitive None
SRR14802079 MDR-TB lineage4.2.1 None
SRR1792478 HR-TB La1.7.1 None
SRR19304036 HR-TB None
SRR18910194 HR-TB lineage2.2 None
SRR19295647 Sensitive lineage4.9 None
SRR2010299 Pre-XDR-TB lineage2.2.1 None
SRR20970043 MDR-TB lineage2.2.1 None
SRR20632814 Sensitive lineage4 None
SRR20969677 HR-TB lineage2 None
SRR20969731 Other lineage2.2.1 None
SRR20969708 HR-TB lineage2.2 None
SRR20970016 Other lineage2.2 None
SRR12708416 Sensitive lineage4.1 None
SRR26399239 Sensitive lineage4.9 None
SRR21732980 Other lineage4.3.3 None
SRR23961558 Other lineage6.3;lineage4.9;lineage2.1 None
SRR26399973 Other lineage4.9;La3 None
SRR23961559 Other lineage4.2;La1.7 None
SRR3675472 Sensitive lineage4.9 None
SRR26159047 Other lineage4.9;lineage4.6.3 None
SRR28119811 Other lineage6.3;lineage2.2.1 None
SRR3675473 Sensitive lineage4.9 None
ERR176778 HR-TB None
SRR3675464 HR-TB lineage4.1 None
SRR3675482 HR-TB None
ERR176779 HR-TB None
SRR3675502 Other None
ERR1035239 HR-TB None
ERR158583 HR-TB None
SRR3675477 Other lineage4.9 None
ERR161039 Sensitive lineage4.3.4 None
ERR161033 HR-TB None
SRR3675488 HR-TB None
ERR181744 HR-TB None
SRR3675486 HR-TB None
ERR4814536 MDR-TB lineage3;lineage2.1 None
ERR4814639 HR-TB lineage4 None
SRR3675501 HR-TB None
SRR3675210 Sensitive lineage4.9 None
SRR3675229 Other lineage4 None
ERR4815471 Other lineage4.9 None
SRR3675222 Other None
ERR3275450 Other lineage4 None
SRR3675266 Sensitive lineage4.9 None
ERR4814734 Other lineage1.2.1.1 None
SRR3675230 RR-TB lineage3 None
SRR3675232 Other lineage4.1.2.1 None
ERR181824 HR-TB lineage4 None
SRR3675246 Sensitive lineage4 None
SRR3675247 Other lineage4.9 None
SRR3675234 Other None
SRR3675249 Sensitive lineage4.9 None
SRR3675270 HR-TB None
SRR3675279 Other None
SRR3675280 HR-TB lineage4.9 None
SRR3675284 HR-TB lineage4.9 None
ERR176651 HR-TB None
ERR181887 HR-TB None
SRR3675318 Other lineage4.9 None
SRR3675312 HR-TB lineage4 None
SRR3675383 HR-TB None
SRR3675387 Sensitive None
ERR176740 HR-TB None
SRR3675456 HR-TB None
ERR2027263 Other lineage4 None
SRR3675455 Sensitive lineage4 None
SRR3675514 Sensitive lineage4.9 None
SRR3675547 Other lineage4.9 None
SRR3675522 Other None
SRR3675542 Other lineage4.9 None
SRR3675541 Sensitive lineage4.9 None
SRR3675548 Sensitive lineage4.9 None
ERR212001 HR-TB None
SRR3675553 Sensitive lineage4.9 None
SRR3675555 HR-TB None
SRR3675550 Other None
SRR5341422 HR-TB lineage2.1 None
ERR212033 HR-TB None
ERR212034 HR-TB None
ERR212125 HR-TB lineage4 None
ERR212123 Other None
SRR3675558 HR-TB None
ERR1035162 Other None
SRR5341384 Sensitive lineage4.9 None
SRR3742665 HR-TB None
ERR4817667 HR-TB lineage4.8 None
ERR2513121 Sensitive lineage3.1.3 None
ERR2446566 Other lineage4.1 None
SRR3675577 Sensitive lineage4.9 None
SRR3675574 HR-TB None
ERR212138 HR-TB lineage4 None
SRR3675571 HR-TB None
ERR4816656 HR-TB None
ERR4816762 Other lineage4;lineage2 None
ERR4818607 Sensitive lineage4.9 None
ERR2229143 Other lineage4.1.1 None
ERR2512770 Other lineage4.2.1 None
ERR4818929 HR-TB None
SRR5341418 Other None
SRR5341453 Sensitive None
SRR5341400 HR-TB lineage4 None
SRR5341373 HR-TB lineage4 None
SRR5341396 Other lineage4 None
ERR4819314 Other lineage1.1.1 None
SRR5341456 Other None
SRR5341296 Sensitive lineage4.9 None
SRR5341432 HR-TB lineage4 None
SRR5341293 HR-TB lineage4 None
ERR1035138 MDR-TB None
SRR5341437 Sensitive lineage4.9 None
SRR5341313 HR-TB None
ERR2514692 Other None
ERR4819933 Other lineage4.9 None
SRR5341300 Other lineage4 None
SRR5341299 Sensitive lineage4 None
SRR5341302 HR-TB None
SRR5341308 Sensitive lineage4 None
ERR1023509 Other None
SRR5341461 Sensitive lineage4 None
ERR2446382 Other lineage4 None
SRR5341315 Sensitive None
SRR5341323 Sensitive lineage4 None
SRR5341330 HR-TB None
ERR6359082 Other lineage4.9 None
SRR5341345 Sensitive lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
SRR5341470 HR-TB None
ERR2693231 Other None
ERR2517475 Other lineage4 None
SRR5341467 Other lineage4 None
ERR4821053 Other lineage3 None
ERR2693239 HR-TB None
ERR2693230 Other None
ERR2693254 Other None
ERR2693257 Other None
ERR2693227 Other lineage4.9 None
SRR5535933 HR-TB None
SRR6045526 HR-TB None
SRR6046141 Other lineage4.9 None
ERR4821655 Sensitive lineage4 None
SRR6045555 HR-TB None
SRR6045892 Sensitive None
ERR2693232 Other lineage4.9 None
SRR6046133 HR-TB None
SRR6044790 HR-TB None
SRR6044819 Sensitive lineage4.9 None
SRR6044838 Other lineage4.9 None