Rv3596c - c.2118C>G
Drug resistance types
90 Sensitive
4 RR-TB
37 HR-TB
10 MDR-TB
5 Pre-XDR-TB
0 XDR-TB
49 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 25 |
| lineage4 | 85 |
| lineage4.4.1.2 | 1 |
| 34 | |
| lineage2.2.1 | 12 |
| lineage2.2 | 3 |
| lineage4.3.4 | 1 |
| lineage1.1.2 | 2 |
| lineage1.1.3.1 | 1 |
| lineage6.1.3 | 1 |
| lineage2.2.1.2 | 2 |
| La1.8.1 | 1 |
| La1.7.1 | 1 |
| lineage6.3;lineage4.9;lineage2.1 | 1 |
| lineage4.1.1.2 | 2 |
| lineage4.9;lineage4.8.1;lineage4.1.1 | 1 |
| lineage1.2.1.1 | 1 |
| lineage2.1 | 2 |
| lineage4.1.2.1 | 2 |
| lineage4;lineage2 | 1 |
| lineage3 | 3 |
| lineage4.8 | 2 |
| lineage4.3.4.2.1 | 2 |
| lineage4.6.2.2 | 1 |
| lineage4.9;lineage2.1 | 1 |
| lineage4.2.1 | 1 |
| lineage2.2.1.1 | 1 |
| lineage4.1 | 1 |
| lineage4.1.2 | 2 |
| lineage4.3.2.1 | 1 |
| lineage4.3.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 195 |
Geographic prevalence
Country level data for this variant is available for 1 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR323048 | Pre-XDR-TB | lineage4.9 | None | ERR067699 | HR-TB | lineage4 | None | ERR323107 | Other | lineage4 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323066 | Sensitive | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | ERR323108 | HR-TB | lineage4 | None | ERR037234 | Sensitive | lineage4.9 | None | ERR067712 | HR-TB | lineage4 | None | ERR1035122 | Sensitive | None | ERR1023502 | MDR-TB | lineage2.2.1 | None | ERR1063896 | Sensitive | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063857 | HR-TB | None | ERR1063883 | Sensitive | lineage4 | None | ERR10796631 | Other | lineage4.3.4 | None | ERR137286 | Sensitive | lineage4 | None | ERR108471 | HR-TB | lineage4 | None | ERR133825 | Sensitive | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR323115 | Sensitive | lineage4 | None | ERR349264 | Sensitive | lineage4 | None | ERR3283024 | Other | None | ERR3283032 | HR-TB | None | ERR349265 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349330 | Sensitive | lineage4 | None | ERR349298 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363421 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR369157 | Sensitive | lineage4.9 | None | ERR363509 | Sensitive | lineage4 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR369151 | Sensitive | lineage4.9 | None | ERR369158 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369162 | Sensitive | lineage4 | None | ERR3797014 | Other | None | ERR373945 | HR-TB | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR3797044 | Other | None | ERR3797017 | Other | None | ERR4024991 | Other | None | ERR3797061 | Other | None | ERR4178226 | Sensitive | lineage4 | None | ERR4769457 | Other | lineage4.9 | None | ERR473332 | Other | lineage4 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | ERR4769444 | HR-TB | lineage4.9 | None | ERR4596910 | Sensitive | lineage4 | None | ERR4769442 | HR-TB | lineage4 | None | ERR6866410 | Sensitive | None | ERR4769521 | HR-TB | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797264 | Sensitive | None | ERR4798099 | Other | None | ERR6865502 | Sensitive | lineage4 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4797474 | Other | None | ERR4798431 | HR-TB | None | ERR4799378 | Sensitive | lineage4 | None | ERR6358979 | Other | None | ERR6358991 | HR-TB | None | ERR6866022 | Other | None | ERR736834 | Sensitive | lineage4 | None | ERR6866639 | Other | None | ERR6866547 | Sensitive | lineage4 | None | ERR6866807 | HR-TB | lineage4 | None | ERR736831 | HR-TB | lineage4.9 | None | ERR736837 | Other | lineage4.9 | None | ERR736872 | Sensitive | lineage4 | None | ERR736835 | HR-TB | None | ERR751326 | Sensitive | lineage4 | None | SRR1062919 | HR-TB | lineage2.2.1 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR10315567 | Other | lineage2.2.1 | None | ERR9787256 | Other | lineage6.1.3 | None | SRR10808399 | Sensitive | lineage4 | None | SRR10808805 | Sensitive | None | SRR1140724 | HR-TB | lineage2.2.1 | None | SRR10809074 | Sensitive | lineage4 | None | SRR1158918 | Sensitive | lineage4 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR1173568 | Other | lineage4.9 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1173777 | Other | lineage4 | None | SRR1180996 | HR-TB | lineage4 | None | SRR1791747 | Other | La1.8.1 | None | SRR14801749 | Sensitive | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR20970016 | Other | lineage2.2 | None | SRR19295647 | Sensitive | lineage4.9 | None | ERR1750909 | RR-TB | lineage4.1.1.2 | None | ERR4814639 | HR-TB | lineage4 | None | ERR779852 | Sensitive | lineage4.9;lineage4.8.1;lineage4.1.1 | None | ERR4814734 | Other | lineage1.2.1.1 | None | SRR3675234 | Other | None | ERR702405 | Sensitive | lineage2.1 | None | SRR3675246 | Sensitive | lineage4 | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR4815815 | Sensitive | lineage4 | None | ERR4817998 | Other | lineage3 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR4818561 | HR-TB | lineage4 | None | ERR4818252 | Other | lineage4.1.1.2 | None | ERR245794 | HR-TB | lineage4.3.4.2.1 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341366 | Sensitive | lineage4 | None | SRR5341412 | Pre-XDR-TB | lineage3 | None | SRR5341461 | Sensitive | lineage4 | None | SRR5341387 | Other | lineage4 | None | SRR5341396 | Other | lineage4 | None | SRR5341425 | Other | lineage4 | None | SRR5341310 | Other | lineage1.1.2 | None | ERR4819809 | HR-TB | lineage4.6.2.2 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341300 | Other | lineage4 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341467 | Other | lineage4 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5535933 | HR-TB | None | SRR5341469 | Other | lineage4 | None | ERR2693231 | Other | None | ERR2693257 | Other | None | SRR5341465 | Pre-XDR-TB | lineage2.2.1 | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | ERR2693230 | Other | None | ERR2693254 | Other | None | SRR6045503 | HR-TB | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6046141 | Other | lineage4.9 | None | SRR6045706 | Sensitive | lineage4 | None | ERR4821655 | Sensitive | lineage4 | None | SRR6045892 | Sensitive | None | SRR6045158 | Other | lineage4.9 | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6044890 | Other | lineage4.9 | None | SRR6044838 | Other | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | SRR6045399 | Other | None | SRR6045371 | Sensitive | lineage4.2.1 | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | SRR6046644 | HR-TB | None | SRR6046802 | Other | lineage4 | None | ERR2693232 | Other | lineage4.9 | None | SRR6511621 | HR-TB | None | ERR4814698 | Other | lineage3 | gb | ERR323037 | HR-TB | lineage4 | None | ERR11466072 | Sensitive | lineage4.3.4.2.1 | None | ERR485006 | HR-TB | lineage4.9 | None | ERR4831618 | MDR-TB | lineage2.1 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | SRR9613550 | HR-TB | lineage4.1.2.1 | None | ERR502510 | Sensitive | lineage4 | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR7535082 | Sensitive | lineage4 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | SRR9971041 | MDR-TB | lineage4.3.3 | None |
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