lineage | Count |
---|---|
lineage4.9 | 10 |
lineage2.2.1 | 7 |
lineage6.3;lineage4.9;lineage2.1 | 1 |
49 | |
lineage4 | 46 |
lineage4.8 | 1 |
lineage4.2.1 | 2 |
lineage2.2 | 5 |
lineage4.9.1 | 1 |
lineage4.3.4 | 1 |
lineage2.2.1.1 | 4 |
lineage4.3.2.1 | 1 |
spoligotype | Count |
---|---|
None | 128 |
ID | Drug resistance | Lineage | Country iso2 | SRR3675209 | Sensitive | lineage4.9 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | SRR23961558 | Other | lineage6.3;lineage4.9;lineage2.1 | None | SAMN02585910 | Other | lineage2.2.1 | None | SRR3675488 | HR-TB | None | ERR176751 | HR-TB | None | ERR176778 | HR-TB | None | ERR176779 | HR-TB | None | ERR158583 | HR-TB | None | SRR3675265 | Other | lineage4 | None | SRR3675222 | Other | None | ERR181824 | HR-TB | lineage4 | None | ERR176651 | HR-TB | None | SRR3675292 | Sensitive | lineage4 | None | SRR3675501 | HR-TB | None | ERR181887 | HR-TB | None | ERR4816151 | Other | lineage4.8 | None | SRR3675502 | Other | None | SRR3675550 | Other | None | ERR212121 | HR-TB | None | ERR212125 | HR-TB | lineage4 | None | SRR3675571 | HR-TB | None | ERR1023509 | Other | None | ERR1035162 | Other | None | ERR4816466 | HR-TB | None | SRR5341418 | Other | None | SRR6046492 | Other | None | SRR6045503 | HR-TB | None | SRR6045555 | HR-TB | None | SRR6045706 | Sensitive | lineage4 | None | SRR6046259 | Sensitive | lineage4.9 | None | ERR4830353 | Other | None | SRR6046482 | HR-TB | None | SRR6045519 | HR-TB | None | SRR6046133 | HR-TB | None | SRR6045371 | Sensitive | lineage4.2.1 | None | SRR6046397 | Other | None | SRR6832787 | RR-TB | lineage2.2.1 | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046802 | Other | lineage4 | None | SRR6046644 | HR-TB | None | SRR6046824 | HR-TB | None | SRR6046897 | Sensitive | lineage4 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR4831546 | HR-TB | lineage2.2 | None | ERR323045 | HR-TB | None | ERR294266 | HR-TB | None | ERR502889 | Other | None | ERR067681 | HR-TB | None | ERR323108 | HR-TB | lineage4 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063857 | HR-TB | None | ERR1063859 | HR-TB | None | ERR1063862 | HR-TB | None | ERR1063858 | HR-TB | None | ERR3439432 | Other | None | ERR133986 | HR-TB | None | ERR3283055 | HR-TB | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR3283021 | HR-TB | None | ERR3283058 | Other | lineage4.9 | None | ERR3445501 | HR-TB | None | ERR349299 | Sensitive | lineage4 | None | ERR3445502 | HR-TB | lineage4 | None | ERR349264 | Sensitive | lineage4 | None | ERR349265 | Sensitive | lineage4 | None | ERR349298 | Sensitive | lineage4 | None | ERR3445503 | HR-TB | None | ERR349266 | Sensitive | lineage4.9 | None | ERR363421 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363445 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR369158 | Sensitive | lineage4 | None | ERR369156 | Sensitive | lineage4.9 | None | ERR363509 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR369163 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR373946 | Sensitive | lineage4 | None | ERR403298 | HR-TB | lineage4 | None | ERR3797043 | HR-TB | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797046 | HR-TB | None | ERR3797036 | HR-TB | None | ERR4178226 | Sensitive | lineage4 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR473332 | Other | lineage4 | None | ERR4769521 | HR-TB | None | ERR4798406 | HR-TB | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4798431 | HR-TB | None | ERR245758 | Other | lineage4.9.1 | None | ERR6865502 | Sensitive | lineage4 | None | ERR6358991 | HR-TB | None | ERR6866807 | HR-TB | lineage4 | None | ERR736835 | HR-TB | None | ERR736817 | HR-TB | lineage4.3.4 | None | SRR1180147 | Other | lineage2.2.1.1 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | ERR736875 | HR-TB | lineage4 | None | ERR8975532 | HR-TB | lineage4.3.2.1 | None | SRR1180270 | Other | lineage2.2.1 | None | SRR1180172 | Other | lineage2.2.1 | None | SRR1183106 | Other | lineage2.2.1.1 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR1183144 | Other | lineage2.2.1 | None | SRR1184024 | Other | lineage2.2.1.1 | None | SRR1183145 | Other | lineage2.2.1 | None | SRR14802079 | MDR-TB | lineage4.2.1 | None |
---|