Rv0005 - c.1425C>T
Drug resistance types
4 Sensitive
2 RR-TB
9 HR-TB
11 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
16 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.7;M.canetti;lineage4.9 | 3 |
| lineage4.2;lineage4.8.1;lineage4.9 | 2 |
| lineage4.9 | 5 |
| La1.7;lineage4.9 | 3 |
| lineage1.1.2 | 2 |
| lineage4.2;lineage4.9 | 2 |
| La3;lineage4.9 | 3 |
| La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | 2 |
| lineage2.1;lineage4.9 | 1 |
| lineage1.2.1.2.1 | 4 |
| lineage4.9;lineage7 | 3 |
| lineage2.2.1 | 3 |
| La1.3;lineage1.2.2.2 | 1 |
| lineage2.1;lineage4.9;lineage7 | 1 |
| La3;lineage2.1;lineage4.9 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| La1.7 | 1 |
| M.canetti;lineage4.9 | 1 |
| lineage2.2 | 1 |
| M.canetti;lineage4.9;lineage9 | 1 |
| lineage4.3.2.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 42 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR6046783 | Other | La1.7;M.canetti;lineage4.9 | None | ERR294266 | HR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | ERR1063846 | HR-TB | lineage4.9 | None | SRR3675488 | Other | La1.7;lineage4.9 | None | ERR2513815 | Sensitive | lineage1.1.2 | gb | SRR6045785 | MDR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR6045887 | Other | La1.7;M.canetti;lineage4.9 | None | SRR6046026 | RR-TB | lineage4.2;lineage4.9 | None | SRR1167384 | Other | La3;lineage4.9 | None | SRR6046362 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | SRR1169306 | Other | La3;lineage4.9 | None | ERR9125281 | MDR-TB | lineage1.2.1.2.1 | None | ERR4822361 | MDR-TB | lineage1.2.1.2.1 | None | DRR130094 | MDR-TB | lineage1.2.1.2.1 | None | SRR16058383 | MDR-TB | lineage1.2.1.2.1 | None | SRR3675456 | RR-TB | lineage4.9;lineage7 | None | SRR26937107 | MDR-TB | lineage2.2.1 | None | SRR6044835 | Other | lineage4.9 | None | SRR25340813 | Sensitive | La1.3;lineage1.2.2.2 | None | SRR6046295 | HR-TB | lineage4.2;lineage4.9 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | ERR387051 | Other | lineage4.9 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | SRR6046460 | MDR-TB | La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 | None | SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None | ERR4830353 | Other | La1.7 | None | SRR7069986 | Sensitive | lineage1.1.2 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | SRR20970043 | MDR-TB | lineage2.2.1 | None | SRR6045399 | Other | M.canetti;lineage4.9 | None | ERR176751 | Other | lineage4.9 | None | SRR6046196 | Other | La1.7;M.canetti;lineage4.9 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | SRR6046382 | Sensitive | lineage2.2.1 | None | ERR4810624 | MDR-TB | lineage2.2 | None | ERR1063856 | HR-TB | M.canetti;lineage4.9;lineage9 | None | SRR3675231 | MDR-TB | lineage4.9;lineage7 | None | SRR1165628 | Other | La3;lineage4.9 | None | SRR12708407 | HR-TB | lineage4.3.2.1 | None | SRR3675267 | Other | La1.7;lineage4.9 | None | SRR6045526 | Other | lineage4.9 | None |
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