Rv3596c - c.1113G>C


Drug resistance types
94 Sensitive 4 RR-TB 55 HR-TB 11 MDR-TB 5 Pre-XDR-TB 0 XDR-TB 49 Other
lineage Counts
lineage Count
lineage2.2.1 16
lineage4.9 127
lineage4.4.1.1.1 1
lineage2;lineage4.9 1
lineage4.1.2 1
La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 2
lineage2.2.1;lineage4 1
La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 1
lineage1.2.1.1 1
lineage4.3.2.1 3
lineage4.6.1.2 3
lineage3 2
La1.7.1;La1.7.X-unk4 1
La1.7;lineage4.9 3
La1;lineage2;lineage4.9 1
La1.7.1;lineage4.9 1
lineage4 3
La1;lineage4.9 3
La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 1
La1.7;lineage3;lineage4.9;lineage7 1
lineage1.1.2 2
lineage3.1.3 1
lineage4.3.3 2
M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 1
lineage4.8;lineage4.9 2
1
lineage4.3.4.2 1
lineage4.1.1.3 1
La1.7.1 1
La1.7;lineage4.9;lineage7 3
La1.8.1 5
lineage2.2.1;lineage4.9 2
lineage6.1.3 1
lineage1;lineage4.9 1
lineage4.1.1.2 1
lineage2.2.2 1
lineage4.2.1 1
lineage1.1.3.1 1
lineage4.4.1.2 1
La1;lineage4.1.2 1
lineage4.3.4.1 2
lineage2.2.1.1 1
lineage4.6.2.2 2
lineage4.3.4 1
La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 1
lineage4.8 1
La1.7;lineage3.1;lineage4 1
lineage4.4.2 1
lineage4.3.4.2.1 2
lineage3.1.2.1 1
La1.2.BCG 1
La1.7;lineage4.9;lineage6 1
spoligotype Counts
spoligotype Count
None 218
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
SRR9971114 Other lineage2.2.1 None
ERR736872 HR-TB lineage4.9 None
SRR12708414 HR-TB lineage2.2.1 None
ERR4769417 Pre-XDR-TB lineage4.9 None
SRR1180345 Other lineage4.9 None
SRR1181215 Sensitive lineage4.4.1.1.1 None
SRR1180300 Sensitive lineage4.9 None
SRR1159378 Other lineage4.9 None
SRR1180946 Sensitive lineage2;lineage4.9 None
ERR4188247 HR-TB lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
ERR702405 Sensitive lineage4.9 None
ERR2026697 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR13285068 Sensitive lineage4.9 None
SRR1181237 Sensitive lineage2.2.1;lineage4 None
ERR736863 HR-TB La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 None
ERR323115 Sensitive lineage4.9 None
ERR4798099 Other lineage4.9 None
ERR4831616 MDR-TB lineage2.2.1 None
ERR4814734 Other lineage1.2.1.1 None
SRR12708407 HR-TB lineage4.3.2.1 None
SRR3675235 Sensitive lineage4.9 None
ERR181887 Other lineage4.9 None
ERR502510 Sensitive lineage4.9 None
ERR3283030 HR-TB lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
SRR1062880 MDR-TB lineage4.6.1.2 None
SRR1180420 Sensitive lineage4.9 None
ERR4799478 Pre-XDR-TB lineage2.2.1 None
ERR4819051 Sensitive lineage4.9 None
ERR926158 Sensitive lineage4.9 None
SRR16156188 Sensitive lineage4.9 None
ERR4816470 HR-TB lineage3 None
ERR4769474 HR-TB lineage4.9 None
ERR4797184 Sensitive lineage4.9 None
ERR3445503 Other La1.7.1;La1.7.X-unk4 None
ERR216938 HR-TB La1.7;lineage4.9 None
ERR067699 Sensitive La1;lineage2;lineage4.9 None
SRR10315567 HR-TB lineage2.2.1 None
ERR1063846 HR-TB lineage4.9 None
ERR926161 Sensitive lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR12708392 Other lineage2.2.1 None
SRR6511621 Sensitive lineage4.9 None
ERR1063859 HR-TB La1.7.1;lineage4.9 None
SRR5341323 Sensitive lineage4.9 None
ERR1063862 HR-TB lineage4.9 None
ERR751326 Other lineage4.9 None
SRR1180319 Sensitive lineage4.9 None
ERR926159 Sensitive lineage4.9 None
SRR1181349 Sensitive lineage4 None
ERR971389 Sensitive lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
SRR12416842 HR-TB lineage4.9 None
ERR133825 HR-TB La1;lineage4.9 None
ERR1023509 Other lineage4.9 None
ERR926164 Other lineage4.9 None
ERR2026696 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage4.9;lineage6.2;lineage6.3 None
SRR3675246 Other lineage4.9 None
SRR21677886 Sensitive lineage4.9 None
SRR5341308 Sensitive lineage4.9 None
SRR1180399 Sensitive lineage4.9 None
SRR1180413 Sensitive lineage4.9 None
ERR779852 Sensitive lineage4.9 None
SRR3675585 Sensitive lineage4.9 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
SRR5341298 Sensitive lineage4.9 None
SRR1181351 Sensitive lineage4.9 None
ERR245675 Sensitive lineage1.1.2 None
ERR2513121 Sensitive lineage3.1.3 None
SRR1181402 Sensitive lineage4.9 None
SRR1183965 Sensitive lineage4.9 None
SRR12708419 Other lineage4.3.3 None
SRR5341412 Pre-XDR-TB lineage3 None
ERR6359045 Other M.canetti;lineage4.1.4;lineage4.6.3;lineage4.9;lineage6.3 None
ERR4818536 Other lineage4.9 None
ERR6866022 Other lineage4.8;lineage4.9 None
ERR736875 HR-TB lineage4.9 None
SRR12708396 MDR-TB lineage4.3.2.1 None
SRR1180312 Sensitive lineage4.9 None
SRR1180410 Sensitive lineage4.9 None
ERR1063858 HR-TB lineage4.9 None
SRR7535082 Sensitive lineage4.9 None
ERR323062 Sensitive lineage4.9 None
ERR4798823 HR-TB lineage4 None
SRR1181325 Sensitive lineage4.9 None
ERR176651 Other lineage4.9 None
ERR137286 Other lineage4.9 None
SRR1180406 Sensitive lineage4.9 None
SRR10808668 Sensitive lineage2.2.1 None
SRR5341373 Other lineage4.9 None
ERR2026698 HR-TB La1.7.1;M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.2;lineage6.3 None
ERR1063896 Sensitive None
ERR3797080 Sensitive lineage4.9 None
ERR9786592 Other lineage4.3.4.2 None
SRR12708413 HR-TB lineage4.1.1.3 None
SRR1792478 HR-TB La1.7.1 None
SRR5341400 Sensitive lineage4.9 None
SRR5341432 Sensitive La1.7;lineage4.9;lineage7 None
SRR5341455 Sensitive lineage4.9 None
SRR6044780 Sensitive lineage4.9 None
SRR1791747 Other La1.8.1 None
ERR6358979 Other lineage4.9 None
ERR323108 HR-TB La1.7;lineage4.9 None
ERR4831617 MDR-TB lineage2.2.1 None
ERR736848 Other lineage4.9 None
SRR1184114 Sensitive lineage2.2.1;lineage4.9 None
ERR926160 Sensitive lineage4.9 None
ERR9787256 Other lineage6.1.3 None
ERR736856 Sensitive lineage4.9 None
ERR323045 HR-TB lineage1;lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
ERR2446566 Other lineage4.9 None
SRR1181283 Sensitive lineage4.9 None
ERR4818252 Sensitive lineage4.1.1.2 None
SRR12708370 Pre-XDR-TB lineage2.2.2 None
SAMN02380990 MDR-TB lineage4.6.1.2 None
SRR5341461 HR-TB lineage4.9 None
SRR10808399 Sensitive lineage4.9 None
ERR3273109 HR-TB lineage4 None
ERR926163 Other lineage4.9 None
ERR176779 HR-TB lineage4.9 None
SRR1183054 Sensitive lineage4.9 None
SRR14802079 MDR-TB lineage4.2.1 None
SRR5341453 Other lineage4.9 None
ERR926154 Sensitive lineage4.9 None
ERR6866639 Other lineage4.9 None
ERR8479578 Sensitive lineage1.1.3.1 None
ERR323056 HR-TB lineage4.4.1.2 None
ERR473332 Other lineage4.9 None
SRR9970978 Sensitive La1;lineage4.1.2 None
ERR11465352 Sensitive lineage4.3.4.1 None
ERR11465353 Sensitive lineage4.3.4.1 None
SRR5341467 Other lineage4.9 None
SRR11972367 Sensitive lineage2.2.1 None
ERR736834 Sensitive lineage4.9 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR6045892 Sensitive lineage4.9 None
SRR1181390 Sensitive lineage2.2.1;lineage4.9 None
SRR6079962 HR-TB lineage2.2.1.1 None
ERR4797264 Sensitive lineage4.9 None
SRR5341299 HR-TB lineage4.9 None
ERR4818110 Sensitive lineage4.9 None
ERR4024991 Other lineage4.8;lineage4.9 None
SRR5341469 HR-TB lineage4.9 None
SRR20632814 Sensitive lineage4.9 None
SRR5341387 Other lineage4.9 None
ERR181824 HR-TB lineage4.9 None
ERR4819462 Sensitive lineage4.9 None
ERR926156 Sensitive lineage4.9 None
SRR1180355 Sensitive lineage4.9 None
SRR1181256 Other lineage4.9 None
ERR4797474 Sensitive lineage4.9 None
SRR11462861 Other La1.8.1 None
ERR2693252 Sensitive lineage4.9 None
SRR6045795 Sensitive lineage2.2.1 None
ERR4819809 HR-TB lineage4.6.2.2 None
SRR6045010 Sensitive lineage4.9 None
SRR1175506 Sensitive lineage4.9 None
ERR9786597 Other lineage4.6.2.2 None
SRR28351584 HR-TB lineage2.2.1 None
SRR9971041 MDR-TB lineage4.3.3 None
ERR736817 HR-TB lineage4.3.4 None
ERR502511 Sensitive lineage4.9 None
SRR1180391 Sensitive lineage4.9 None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
SRR1180444 Sensitive lineage4.9 None
ERR2026695 MDR-TB La1.7.1;M.canetti;lineage4.2;lineage6.2;lineage6.3 None
SRR5341310 Other lineage1.1.2 None
ERR6866410 Sensitive lineage4.9 None
SRR5341341 Pre-XDR-TB lineage2.2.1 None
ERR926162 Sensitive lineage4.9 None
SRR12708415 HR-TB lineage2.2.1 None
SRR12708418 HR-TB lineage2.2.1 None
ERR323107 Sensitive lineage4.9 None
SRR5341300 HR-TB lineage4.9 None
ERR108125 RR-TB lineage4.9 None
SRR5341293 Sensitive lineage4.9 None
SRR5341425 Other lineage4.9 None
SRR16156817 Other lineage4.9 None
SRR10315751 MDR-TB lineage4.8 None
ERR4821655 HR-TB lineage4.9 None
SRR14801749 HR-TB lineage4.9 None
ERR405219 HR-TB La1.7;lineage3.1;lineage4 None
ERR3797019 Other La1.8.1 None
SRR22424787 Sensitive lineage4.9 None
ERR124636 Sensitive lineage4.9 None
SRR10808805 Other La1;lineage4.9 None
SRR20969542 Other lineage4.4.2 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR245794 HR-TB lineage4.3.4.2.1 None
ERR3797073 Other La1.8.1 None
ERR1063849 HR-TB lineage4.9 None
SRR1175512 Sensitive lineage4.9 None
ERR1034634 HR-TB lineage4.9 None
ERR3797065 RR-TB lineage4.9 None
ERR5311094 HR-TB lineage4.9 None
ERR4800102 Sensitive lineage3.1.2.1 None
ERR212125 HR-TB lineage4.9 None
SRR9971112 Other lineage2.2.1 None
SRR1915487 Other La1.2.BCG None
ERR4769497 Other La1;lineage4.9 None
ERR176778 HR-TB lineage4.9 None
SRR19295647 Sensitive lineage4.9 None
SRR9971270 RR-TB lineage2.2.1 None
ERR926165 Sensitive lineage4.9 None
ERR4796254 Sensitive lineage4.9 None
ERR323044 HR-TB lineage4.3.4.2.1 None
SRR7236177 Other La1.8.1 None
ERR926155 Sensitive lineage4.9 None
ERR926157 Sensitive lineage4.9 None
SRR1140712 MDR-TB lineage4.6.1.2 None
SRR1158918 Sensitive lineage4.9 None
ERR6866547 Other La1.7;lineage4.9;lineage6 None
ERR323066 Sensitive lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
ERR3797029 Other lineage4.9 None