Rv1630 - c.960G>C
Drug resistance types
13 Sensitive
20 RR-TB
10 HR-TB
5 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
31 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage3;lineage4 | 1 |
| lineage4.9 | 24 |
| lineage4.1.2.1;lineage4.9 | 1 |
| lineage4.8 | 8 |
| lineage3 | 9 |
| La1;lineage4.9 | 1 |
| lineage3.1.3 | 1 |
| lineage4.1.2.1;lineage4.4.1.1 | 1 |
| lineage4.1.2.1 | 1 |
| La3;lineage2.1;lineage6.3 | 1 |
| lineage5.1.1 | 1 |
| lineage2.2;lineage4 | 1 |
| lineage4.4.1.1 | 1 |
| La1.7;lineage4.9 | 2 |
| lineage4.3.4.2.1 | 3 |
| La3 | 2 |
| La1.4 | 1 |
| lineage2.2.1 | 4 |
| 1 | |
| La1.8.1 | 1 |
| lineage2.2.1;lineage4.9 | 1 |
| lineage2.1 | 2 |
| La1.7.1 | 1 |
| lineage2.2 | 1 |
| lineage2.1;lineage4.9 | 2 |
| La1.2 | 2 |
| lineage4.1.2.1;lineage4.4.1 | 1 |
| lineage4 | 1 |
| lineage1.1.1 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| lineage4.2.2.2 | 1 |
| lineage2.2;lineage4.9 | 1 |
| La1.3 | 1 |
| lineage4.6.1.1 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 82 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1173740 | Other | lineage3;lineage4 | None | SRR1184329 | Other | lineage4.9 | None | SRR1062928 | Other | lineage4.1.2.1;lineage4.9 | None | ERR502470 | RR-TB | lineage4.9 | None | ERR4816151 | Sensitive | lineage4.8 | None | SRR20632814 | Sensitive | lineage4.9 | None | SRR1173770 | Other | lineage4.9 | None | SRR6789621 | Other | lineage4.9 | None | SRR1173281 | Other | lineage3 | None | ERR4769550 | Sensitive | La1;lineage4.9 | None | SRR18913742 | Sensitive | lineage3.1.3 | None | SRR1049726 | Other | lineage4.1.2.1;lineage4.4.1.1 | None | SRR1140736 | Other | lineage4.1.2.1 | None | SRR1173170 | Other | lineage4.9 | None | ERR4816762 | Sensitive | lineage4.9 | None | SRR6045359 | Sensitive | lineage4.9 | None | ERR4810741 | HR-TB | La3;lineage2.1;lineage6.3 | None | ERR751345 | Other | lineage5.1.1 | None | ERR2513259 | Other | lineage3 | None | SRR16156832 | RR-TB | lineage2.2;lineage4 | None | ERR5917972 | MDR-TB | lineage4.4.1.1 | za | ERR4818561 | Sensitive | lineage4.9 | None | ERR4769433 | RR-TB | lineage4.9 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | ERR978766 | RR-TB | lineage4.8 | None | ERR978767_ERR978765_ERR978766 | RR-TB | lineage4.8 | None | SAMN02380982 | MDR-TB | lineage4.3.4.2.1 | None | SRR1172817 | Other | La3 | None | ERR4819383 | RR-TB | lineage4.9 | None | SRR16278274 | Other | La1.4 | None | SRR1062871 | RR-TB | lineage4.3.4.2.1 | None | ERR3283006 | RR-TB | lineage4.9 | None | SRR1173118 | Other | lineage2.2.1 | None | SRR1184372 | MDR-TB | None | SRR9971270 | RR-TB | lineage2.2.1 | None | SRR11462861 | Other | La1.8.1 | None | ERR4815310 | Other | lineage2.2.1;lineage4.9 | None | SRR1140716 | Other | lineage3 | None | SRR1173778 | Other | lineage4.9 | None | ERR978765 | RR-TB | lineage4.8 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR1710057 | Other | lineage2.1 | None | ERR502481 | RR-TB | lineage4.9 | None | SRR3416776 | Other | lineage2.1 | None | SRR1792478 | HR-TB | La1.7.1 | None | SAMEA3501073 | RR-TB | lineage4.8 | None | ERR4821276 | Sensitive | lineage3 | None | SRR1196677 | Other | lineage2.2 | None | SRR1184312 | Other | lineage2.2.1 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | ERR4817628 | Sensitive | lineage4.8 | gb | ERR502473 | RR-TB | lineage4.9 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | ERR4814639 | HR-TB | lineage4.9 | None | SRR1172728 | RR-TB | La3 | None | ERR4815815 | Sensitive | lineage4.9 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | ERR4769418 | Other | La1.2 | None | SRR1049725 | Other | lineage4.1.2.1;lineage4.4.1 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR4769417 | Pre-XDR-TB | lineage4.9 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | ERR502474 | RR-TB | lineage4.9 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | ERR4817667 | HR-TB | lineage4.8 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | SRR11342687 | RR-TB | lineage4.2.2.2 | None | SRR7851312 | Other | La1.2 | None | ERR4815550 | Other | lineage2.2;lineage4.9 | None | ERR067712 | Sensitive | lineage4.9 | None | SRR1173384 | Other | lineage4.9 | None | ERR4816470 | HR-TB | lineage3 | None | ERR502478 | RR-TB | lineage4.9 | None | SRR6046376 | Other | lineage3 | None | ERR4596902 | MDR-TB | lineage3 | None | ERR978767 | RR-TB | lineage4.8 | None | ERR4769552 | Sensitive | La1.3 | None | SRR7535047 | RR-TB | lineage4.6.1.1 | None | ERR3797062 | RR-TB | lineage4.9 | None | ERR4819546 | HR-TB | lineage3 | None |
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