lineage | Count |
---|---|
lineage4.8.1 | 1 |
lineage4.3.4.1 | 2 |
lineage4.5 | 2 |
lineage4.4.1.2 | 1 |
12 | |
lineage4 | 16 |
lineage4.3.4.2.1 | 1 |
lineage3 | 2 |
lineage4;lineage3.1 | 1 |
lineage4.1.2.1 | 1 |
lineage2.2.1 | 1 |
La1.8.1 | 1 |
lineage4.3.4 | 2 |
lineage4.8 | 2 |
lineage4.6.1.2 | 2 |
lineage4.9 | 29 |
lineage4.9;lineage2.2 | 1 |
lineage4.4.1.1.1 | 1 |
lineage2.2 | 1 |
lineage2 | 1 |
La1.7.1 | 1 |
lineage2.1 | 1 |
lineage4;lineage2 | 1 |
lineage1.1.1 | 1 |
spoligotype | Count |
---|---|
None | 84 |
ID | Drug resistance | Lineage | Country iso2 | SRR9971150 | RR-TB | lineage4.8.1 | None | ERR11465353 | Sensitive | lineage4.3.4.1 | None | ERR4828628 | MDR-TB | lineage4.5 | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | ERR323045 | HR-TB | None | ERR11465352 | Sensitive | lineage4.3.4.1 | None | ERR323108 | HR-TB | lineage4 | None | ERR067712 | HR-TB | lineage4 | None | ERR405209 | Sensitive | lineage4 | None | ERR1063859 | HR-TB | None | ERR11465511 | Sensitive | lineage4.3.4.2.1 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR1063862 | HR-TB | None | ERR1063858 | HR-TB | None | ERR3445503 | HR-TB | None | ERR4596902 | HR-TB | lineage3 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4769474 | HR-TB | lineage4 | None | ERR6866125 | Sensitive | lineage4.1.2.1 | None | ERR4798823 | HR-TB | lineage4 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | SRR11462861 | Other | La1.8.1 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736875 | HR-TB | lineage4 | None | SRR10315751 | MDR-TB | lineage4.8 | None | SRR1049581 | MDR-TB | lineage4.6.1.2 | None | SRR1140712 | MDR-TB | lineage4.6.1.2 | None | SRR1175513 | Other | lineage4.9 | None | SRR1172807 | Sensitive | lineage4.9 | None | SRR1175487 | Sensitive | lineage4.9 | None | SRR1175506 | Sensitive | lineage4.9 | None | SRR1175512 | Sensitive | lineage4.9 | None | SRR1180250 | Other | lineage4.9 | None | SRR1180148 | Sensitive | lineage4.9 | None | SRR1180312 | Sensitive | lineage4.9 | None | SRR1180300 | Sensitive | lineage4.9 | None | SRR1180319 | Sensitive | lineage4.9 | None | SRR1180413 | Sensitive | lineage4.9 | None | SRR1180375 | Sensitive | lineage4.9 | None | SRR1180391 | Sensitive | lineage4.9 | None | SRR1180406 | Sensitive | lineage4.9 | None | SRR1180345 | Other | lineage4.9 | None | SRR1180355 | Sensitive | lineage4.9 | None | SRR1180399 | Sensitive | lineage4.9 | None | SRR1180410 | Sensitive | lineage4.9;lineage2.2 | None | SRR1180420 | Sensitive | lineage4.9 | None | SRR1180444 | Sensitive | lineage4.9 | None | SRR1180977 | Sensitive | lineage4.9 | None | SRR1181351 | Sensitive | lineage4.9 | None | SRR1181214 | Other | lineage4.9 | None | SRR1181283 | Sensitive | lineage4.9 | None | SRR1181349 | Sensitive | lineage4.4.1.1.1 | None | SRR1181237 | Sensitive | lineage2.2 | None | SRR1181325 | Sensitive | lineage4.9 | None | SRR1183054 | Sensitive | lineage4.9 | None | SRR1181368 | Other | lineage4.9 | None | SRR1181402 | Sensitive | lineage4.9 | None | SRR1181390 | Sensitive | lineage2 | None | ERR176779 | HR-TB | None | SRR1184021 | Sensitive | lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR22424787 | Sensitive | lineage4.9 | None | ERR176778 | HR-TB | None | ERR4814639 | HR-TB | lineage4 | None | ERR161039 | Sensitive | lineage4.3.4 | None | ERR181744 | HR-TB | None | ERR212138 | HR-TB | lineage4 | None | ERR176651 | HR-TB | None | ERR181824 | HR-TB | lineage4 | None | ERR181887 | HR-TB | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR212125 | HR-TB | lineage4 | None | ERR4816762 | Other | lineage4;lineage2 | None | ERR4816548 | MDR-TB | lineage4.5 | None | ERR4817667 | HR-TB | lineage4.8 | None | SRR5341400 | HR-TB | lineage4 | None | ERR4819314 | Other | lineage1.1.1 | None | ERR4818561 | HR-TB | lineage4 | None | SRR5341373 | HR-TB | lineage4 | None | SRR5341293 | HR-TB | lineage4 | None | ERR4819546 | HR-TB | lineage3 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341313 | HR-TB | None | SRR5341315 | Sensitive | None |
---|