lineage | Count |
---|---|
La1.7;lineage4.9 | 4 |
La2;lineage4.9 | 1 |
lineage2.2.1 | 4 |
lineage4.9 | 7 |
lineage2.2.2 | 1 |
lineage2.2.1.1 | 4 |
1 | |
lineage4.9;lineage7 | 1 |
lineage6.1.1 | 2 |
lineage4.9;lineage9 | 2 |
lineage4.2;lineage4.8.1;lineage4.9 | 1 |
La2;lineage4.9;lineage9 | 1 |
lineage4.3.2;lineage4.9 | 1 |
lineage4.9;lineage6.3 | 1 |
lineage3.1.2.1;lineage3.1.2.2 | 1 |
lineage2.1;lineage4.9 | 1 |
lineage3.1.2.2 | 1 |
lineage6.1.3 | 1 |
La1.4 | 1 |
lineage4.6.3;lineage4.9 | 1 |
M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | 1 |
lineage2.1;lineage4.9;lineage7 | 1 |
lineage4.2;lineage4.9 | 1 |
M.canetti;lineage4.2;lineage4.9 | 1 |
La1.7.1 | 1 |
spoligotype | Count |
---|---|
None | 42 |
ID | Drug resistance | Lineage | Country iso2 | ERR323108 | HR-TB | La1.7;lineage4.9 | None | ERR323039 | HR-TB | La2;lineage4.9 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | SRR10040221 | MDR-TB | lineage2.2.1 | None | ERR4596910 | Sensitive | lineage4.9 | None | DRR185024 | Other | lineage2.2.2 | None | SRR1183111 | HR-TB | lineage4.9 | None | SRR1180147 | Other | lineage2.2.1.1 | None | ERR176560 | HR-TB | La1.7;lineage4.9 | None | ERR987722 | MDR-TB | None | ERR212034 | HR-TB | La1.7;lineage4.9 | None | SRR3675539 | HR-TB | lineage4.9;lineage7 | None | ERR9787014 | Other | lineage6.1.1 | None | ERR387051 | Other | lineage4.9 | None | SRR1174897 | MDR-TB | lineage4.9;lineage9 | None | SRR5341470 | MDR-TB | lineage4.9;lineage9 | None | ERR294266 | HR-TB | lineage4.2;lineage4.8.1;lineage4.9 | None | SRR3675582 | Other | lineage4.9 | None | DRR184629 | Other | lineage2.2.1 | None | ERR323053 | MDR-TB | La2;lineage4.9;lineage9 | None | SRR1181091 | Other | lineage2.2.1.1 | None | SRR1180172 | Other | lineage2.2.1 | None | ERR3799304 | Other | lineage6.1.1 | None | SRR1183144 | Other | lineage2.2.1 | None | ERR736865 | HR-TB | lineage4.3.2;lineage4.9 | None | ERR502524 | HR-TB | lineage4.9;lineage6.3 | None | SRR1172310 | HR-TB | lineage4.9 | None | ERR987729 | HR-TB | lineage3.1.2.1;lineage3.1.2.2 | None | SRR3675495 | Other | lineage2.1;lineage4.9 | None | ERR4798648 | MDR-TB | lineage3.1.2.2 | None | SRR26159035 | Sensitive | lineage4.9 | None | ERR1023236 | Other | lineage6.1.3 | None | SRR1184024 | RR-TB | lineage2.2.1.1 | None | SRR16278274 | Other | La1.4 | None | SRR1183106 | RR-TB | lineage2.2.1.1 | None | SRR26159047 | Other | lineage4.6.3;lineage4.9 | None | SRR1180226 | HR-TB | lineage4.9 | None | SRR6046397 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.9;lineage6.3 | None | SRR3675555 | HR-TB | lineage2.1;lineage4.9;lineage7 | None | ERR4828872 | Sensitive | lineage4.2;lineage4.9 | None | SRR3675571 | HR-TB | M.canetti;lineage4.2;lineage4.9 | None | SRR1792478 | HR-TB | La1.7.1 | None |
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