Rv0676c - c.2616T>C
Drug resistance types
42 Sensitive
3 RR-TB
47 HR-TB
10 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
38 Other
lineage Counts
| lineage | Count |
|---|---|
| 59 | |
| lineage4 | 44 |
| lineage4.1.1.2 | 1 |
| lineage2.2.1 | 11 |
| lineage4.9;lineage2.1 | 1 |
| lineage4.3.3 | 1 |
| lineage4.9 | 6 |
| lineage2.2.1.1 | 1 |
| lineage4.1 | 1 |
| lineage4.1.2 | 2 |
| lineage4.8 | 1 |
| lineage4.3.2.1 | 1 |
| La1.8.1 | 3 |
| La1.2 | 1 |
| lineage1.1.2 | 1 |
| lineage2.2 | 1 |
| lineage4.3.4 | 1 |
| lineage1.1.3.1 | 1 |
| lineage6.1.3 | 1 |
| lineage2.2.1.2 | 2 |
| La1.7.1 | 1 |
| lineage3.1 | 1 |
| lineage4;lineage2.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 143 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR3675234 | Other | None | SRR3675465 | HR-TB | None | ERR176643 | HR-TB | None | ERR181824 | HR-TB | lineage4 | None | SRR3675246 | Sensitive | lineage4 | None | ERR234659 | HR-TB | None | SRR3675311 | Other | None | SRR5341425 | Other | lineage4 | None | SRR5341387 | Other | lineage4 | None | ERR4818252 | Other | lineage4.1.1.2 | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341455 | Sensitive | lineage4 | None | SRR5341298 | Sensitive | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341341 | Pre-XDR-TB | lineage2.2.1 | None | SRR5341333 | HR-TB | None | SRR5341366 | Sensitive | lineage4 | None | ERR2693230 | Other | None | ERR2693231 | Other | None | SRR5341469 | Other | lineage4 | None | ERR502511 | Sensitive | lineage4.9;lineage2.1 | None | SRR6046210 | Other | lineage4 | None | SRR5535933 | HR-TB | None | ERR2693257 | Other | None | ERR2693254 | Other | None | SRR6045795 | HR-TB | lineage2.2.1 | None | ERR4821693 | HR-TB | lineage4.3.3 | None | SRR6045892 | Sensitive | None | SRR6044890 | Other | lineage4.9 | None | SRR6044876 | Sensitive | lineage4 | None | SRR6046617 | HR-TB | lineage2.2.1 | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6045010 | Other | lineage4 | None | SRR6045233 | HR-TB | None | ERR4831617 | MDR-TB | lineage2.2.1 | None | SRR6046644 | HR-TB | None | SRR6511621 | HR-TB | None | ERR4831117 | HR-TB | None | ERR4831616 | MDR-TB | lineage2.2.1 | None | ERR4831620 | MDR-TB | lineage2.2.1 | None | ERR4831621 | MDR-TB | lineage2.2.1.1 | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR4831657 | MDR-TB | lineage2.2.1 | None | SRR7496509 | Other | None | SRR8217918 | HR-TB | None | SRR9970980 | Other | lineage4.1.2 | None | SRR9970979 | Sensitive | lineage4.8 | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR323066 | Sensitive | lineage4 | None | ERR323043 | HR-TB | None | SRR9971112 | Other | lineage2.2.1 | None | ERR323108 | HR-TB | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | ERR323107 | Other | lineage4 | None | ERR1035122 | Sensitive | None | ERR1063883 | Sensitive | lineage4 | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None | ERR1063896 | Sensitive | None | ERR108471 | HR-TB | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR137286 | Sensitive | lineage4 | None | ERR323115 | Sensitive | lineage4 | None | ERR3283031 | HR-TB | None | ERR3283014 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3283024 | Other | None | ERR3283032 | HR-TB | None | ERR3283055 | HR-TB | None | ERR3445501 | HR-TB | None | ERR3797014 | Other | None | ERR3445502 | HR-TB | lineage4 | None | ERR3797047 | HR-TB | lineage4 | None | ERR3797046 | HR-TB | None | ERR3797017 | Other | None | ERR3797044 | Other | None | ERR3797081 | Sensitive | lineage4 | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797061 | Other | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3797064 | Sensitive | None | ERR3797060 | Other | La1.8.1 | None | ERR3797087 | Sensitive | lineage4 | None | ERR4024991 | Other | None | ERR4188247 | HR-TB | None | ERR4797184 | Sensitive | lineage4 | None | ERR473332 | Other | lineage4 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4796929 | Sensitive | lineage4 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4797264 | Sensitive | None | ERR4811022 | HR-TB | None | ERR4797474 | Other | None | ERR4798099 | Other | None | ERR4810741 | HR-TB | None | ERR4799378 | Sensitive | lineage4 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4811493 | HR-TB | None | ERR4811105 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR6866022 | Other | None | ERR6358979 | Other | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR6866410 | Sensitive | None | ERR6866547 | Sensitive | lineage4 | None | ERR6866639 | Other | None | ERR736834 | Sensitive | lineage4 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | ERR736856 | HR-TB | lineage4 | None | ERR736875 | HR-TB | lineage4 | None | ERR736848 | HR-TB | None | ERR736867 | HR-TB | None | ERR736872 | Sensitive | lineage4 | None | ERR736874 | HR-TB | None | ERR751326 | Sensitive | lineage4 | None | ERR9634265 | Sensitive | None | ERR9787256 | Other | lineage6.1.3 | None | SRR10315567 | Other | lineage2.2.1 | None | SRR10808805 | Sensitive | None | SRR10808399 | Sensitive | lineage4 | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR10809074 | Sensitive | lineage4 | None | SRR1172728 | MDR-TB | None | SRR1167384 | Other | lineage4 | None | SRR1172796 | Sensitive | lineage2.2.1.2 | None | SRR1173568 | Other | lineage4.9 | None | SRR1173777 | Other | lineage4 | None | SRR8692790 | RR-TB | lineage4 | None | SRR1183965 | Sensitive | lineage4.9 | None | SRR12416824 | HR-TB | None | SRR1791747 | Other | La1.8.1 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR19303884 | HR-TB | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR14801749 | Sensitive | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR19304036 | HR-TB | None | SRR8692905 | HR-TB | None | SRR8692800 | Other | lineage4 | None | SRR8692863 | Other | lineage4;lineage2.2 | None |
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