Rv3596c - c.1359G>C
Drug resistance types
18 Sensitive
2 RR-TB
30 HR-TB
5 MDR-TB
0 Pre-XDR-TB
0 XDR-TB
37 Other
lineage Counts
| lineage | Count |
|---|---|
| M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | 1 |
| lineage4.9 | 32 |
| lineage4.3.4.2.1 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | 4 |
| La1.7.1 | 1 |
| La1.6;La3;lineage4.6.4;lineage4.9 | 1 |
| lineage4.1.1.3 | 1 |
| La1.7;lineage4.9 | 4 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.9 | 1 |
| lineage4.9;lineage9 | 1 |
| lineage4.1.2.1 | 2 |
| La1;lineage4.9 | 2 |
| La3;lineage4.9 | 8 |
| La1;lineage4.1.2 | 1 |
| lineage2.2 | 1 |
| La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | 1 |
| 2 | |
| lineage4 | 2 |
| lineage1.2.1.2 | 1 |
| La1.7;lineage4.9;lineage6 | 1 |
| lineage3 | 1 |
| La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | 1 |
| La3;lineage4 | 1 |
| lineage4.2;lineage4.6.3;lineage4.9.1 | 1 |
| lineage4.3.4.2 | 1 |
| La1.6;La3;lineage4.9 | 2 |
| lineage4.6.2.2 | 2 |
| La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | 1 |
| lineage4.9;lineage6.3 | 1 |
| lineage4.4.1.2 | 1 |
| La1.2 | 1 |
| lineage2.2.1 | 1 |
| La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | 1 |
| La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | 1 |
| La3;lineage2.1;lineage4.9 | 1 |
| La1.7.X-unk4;lineage4.9 | 1 |
| La1.8.1 | 1 |
| lineage4.8 | 1 |
| lineage4.1;lineage4.8 | 2 |
| lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | 1 |
| lineage4.6.3;lineage4.9 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 92 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Variant Proportion
Hover over a Country 0–0.1
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
0.1–0.2
0.2–0.3
0.3–0.4
0.4–0.5
0.5–0.6
0.6–0.8
0.8+
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 |
|---|---|---|---|
| ERR11252599 | Other | M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 | None |
| ERR11252736 | Other | lineage4.9 | None |
| ERR161034 | HR-TB | lineage4.3.4.2.1 | None |
| ERR2693245 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None |
| ERR3797017 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None |
| SRR1792478 | HR-TB | La1.7.1 | None |
| ERR2693231 | Other | La1.6;La3;lineage4.6.4;lineage4.9 | None |
| ERR736856 | Sensitive | lineage4.9 | None |
| SRR10809074 | Sensitive | lineage4.9 | None |
| ERR1063883 | HR-TB | lineage4.9 | None |
| ERR11465665 | Other | lineage4.1.1.3 | None |
| SRR29096394 | Sensitive | lineage4.9 | None |
| ERR4769474 | HR-TB | lineage4.9 | None |
| ERR216938 | HR-TB | La1.7;lineage4.9 | None |
| ERR3283020 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.9 | None |
| SRR6046720 | HR-TB | lineage4.9;lineage9 | None |
| ERR2041726 | MDR-TB | lineage4.1.2.1 | None |
| SRR23961542 | Other | La1;lineage4.9 | None |
| ERR2693230 | HR-TB | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None |
| ERR4817731 | HR-TB | lineage4.9 | None |
| ERR3797064 | Other | La3;lineage4.9 | None |
| SRR9970978 | Sensitive | La1;lineage4.1.2 | None |
| ERR3797065 | RR-TB | lineage4.9 | None |
| ERR4799513 | HR-TB | lineage2.2 | None |
| SRR3675234 | Other | La1.6;La3;lineage4.6.4;lineage4.8.1;lineage4.9 | None |
| ERR6359082 | Other | lineage4.9 | None |
| ERR3797014 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.8.1;lineage4.9 | None |
| ERR176560 | HR-TB | La1.7;lineage4.9 | None |
| ERR9786843 | Other | None | |
| ERR11252612 | Other | La3;lineage4.9 | None |
| SRR28351339 | MDR-TB | lineage4 | None |
| ERR212034 | HR-TB | La1.7;lineage4.9 | None |
| ERR3797087 | Sensitive | lineage4.9 | None |
| SRR12006550 | Sensitive | lineage1.2.1.2 | None |
| ERR4819241 | Other | lineage4.9 | None |
| ERR6866547 | Other | La1.7;lineage4.9;lineage6 | None |
| SRR28351347 | Other | lineage3 | None |
| ERR3797044 | Other | La1.6;La3;M.canetti;lineage2.1;lineage4.6.4;lineage4.9 | None |
| ERR3283028 | Other | La3;lineage4 | None |
| ERR3283026 | HR-TB | lineage4.2;lineage4.6.3;lineage4.9.1 | None |
| ERR9786592 | Other | lineage4.3.4.2 | None |
| SRR6045548 | Sensitive | lineage4.9 | None |
| ERR3797061 | Other | La1.6;La3;lineage4.9 | None |
| ERR323115 | Sensitive | lineage4.9 | None |
| SRR14801749 | HR-TB | lineage4.9 | None |
| SRR29050859 | Other | lineage4.9 | None |
| ERR9119525 | MDR-TB | lineage4.6.2.2 | None |
| ERR4872119 | MDR-TB | lineage4.6.2.2 | None |
| ERR3283011 | Other | La3;lineage4.9 | None |
| SRR6046644 | HR-TB | La1.6;M.canetti;lineage4.8.1;lineage4.9;lineage6.3 | None |
| ERR4815441 | HR-TB | lineage4.9 | None |
| ERR212121 | HR-TB | lineage4.9;lineage6.3 | None |
| ERR4819877 | HR-TB | lineage4.9 | None |
| ERR4816478 | HR-TB | lineage4 | None |
| ERR4816656 | Other | lineage4.9 | None |
| ERR323056 | HR-TB | lineage4.4.1.2 | None |
| ERR736834 | Sensitive | lineage4.9 | None |
| SRR23961549 | Other | La1.2 | None |
| ERR3283057 | Sensitive | La3;lineage4.9 | None |
| ERR11252664 | Other | lineage2.2.1 | None |
| ERR212001 | HR-TB | None | |
| SRR10808730 | Other | lineage4.9 | None |
| ERR4819422 | HR-TB | lineage4.9 | None |
| SRR6045217 | Sensitive | lineage4.9 | None |
| ERR4818929 | HR-TB | lineage4.9 | None |
| ERR3283024 | Other | La1.6;La3;M.canetti;lineage4.6.4;lineage4.9 | None |
| SRR6044875 | Sensitive | lineage4.9 | None |
| ERR2693257 | Other | La1.6;La3;M.canetti;lineage4.8.1;lineage4.9 | None |
| ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None |
| SRR3675520 | Other | La1.7.X-unk4;lineage4.9 | None |
| SRR1791747 | Other | La1.8.1 | None |
| ERR4820773 | HR-TB | lineage4.9 | None |
| ERR3797048 | Other | La3;lineage4.9 | None |
| ERR6358979 | Other | lineage4.9 | None |
| ERR323108 | HR-TB | La1.7;lineage4.9 | None |
| SRR29096710 | Sensitive | lineage4.9 | None |
| ERR4799025 | Other | lineage4.8 | None |
| SRR14782054 | Other | lineage4.9 | None |
| ERR2693254 | Other | La1.6;La3;lineage4.9 | None |
| ERR3283014 | Sensitive | La3;lineage4.9 | None |
| ERR3283031 | Sensitive | La3;lineage4.9 | None |
| ERR9786526 | Other | lineage4.1;lineage4.8 | None |
| ERR3283047 | Sensitive | La3;lineage4.9 | None |
| SRR29231479 | RR-TB | lineage4.9 | None |
| SRR10808805 | Other | La1;lineage4.9 | None |
| SRR14782405 | HR-TB | lineage4.9 | None |
| ERR6358991 | HR-TB | lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 | None |
| SRR29017081 | Sensitive | lineage4.9 | None |
| ERR2041725 | MDR-TB | lineage4.1.2.1 | None |
| ERR4796929 | Sensitive | lineage4.9 | None |
| ERR11252558 | Other | lineage4.6.3;lineage4.9 | None |
| ERR9786525 | Other | lineage4.1;lineage4.8 | None |
