lineage | Count |
---|---|
24 | |
lineage4.8 | 1 |
lineage4 | 3 |
lineage4.1.1 | 1 |
lineage2.2.1 | 6 |
lineage1.1 | 1 |
lineage4.1.2.1 | 2 |
lineage4.6.2.2 | 2 |
lineage4.9 | 3 |
lineage4.3.3 | 3 |
La1.8.1 | 2 |
lineage4.4.1.1 | 1 |
lineage4.8;lineage4.1 | 1 |
lineage3 | 1 |
lineage2.2 | 1 |
lineage7;lineage2.2.1.2 | 1 |
lineage4.1 | 1 |
lineage3;lineage2.1 | 1 |
spoligotype | Count |
---|---|
None | 55 |
ID | Drug resistance | Lineage | Country iso2 | ERR2693239 | HR-TB | None | ERR4816151 | Other | lineage4.8 | None | SRR3675558 | HR-TB | None | ERR212138 | HR-TB | lineage4 | None | ERR2229143 | Other | lineage4.1.1 | None | ERR2446563 | Other | lineage2.2.1 | nl | ERR3275196 | Other | lineage2.2.1 | nl | SRR5341330 | HR-TB | None | SRR6044835 | Sensitive | lineage4 | None | ERR3077978 | Other | lineage1.1 | None | SRR6046514 | HR-TB | None | SRR6045952 | HR-TB | None | SRR6046492 | Other | None | SRR6397654 | HR-TB | lineage4.1.2.1 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR294248 | HR-TB | None | ERR3283048 | HR-TB | lineage4.9 | None | ERR1023525 | HR-TB | lineage4 | None | ERR3283017 | HR-TB | None | ERR5311099 | HR-TB | None | ERR5311081 | HR-TB | None | ERR5311090 | HR-TB | None | ERR736835 | HR-TB | None | ERR3468544 | HR-TB | None | ERR3797016 | HR-TB | None | ERR4188350 | HR-TB | None | ERR5908228 | Other | lineage4.3.3 | None | ERR3283055 | HR-TB | None | ERR3797023 | HR-TB | La1.8.1 | None | ERR3797046 | HR-TB | None | ERR3797082 | Other | lineage4.9 | None | ERR3797083 | HR-TB | None | ERR8976043 | HR-TB | None | ERR9119096 | Other | lineage4.3.3 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | SRR1173453 | Other | lineage4.4.1.1 | None | ERR9786525 | Other | lineage4.8;lineage4.1 | None | ERR990545 | Other | lineage3 | None | ERR9786384 | Sensitive | lineage4.1.2.1 | None | ERR9786843 | Other | None | SRR1183049 | Other | lineage2.2 | None | SRR1180137 | Other | lineage2.2.1 | None | SRR1181020 | Other | lineage2.2.1 | None | SRR1181289 | Other | lineage2.2.1 | None | SRR1791696 | Other | La1.8.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | ERR1035239 | HR-TB | None | ERR4813861 | Other | lineage4.3.3 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR26399490 | Sensitive | lineage4.9 | None | SRR3675464 | HR-TB | lineage4.1 | None | SRR3675482 | HR-TB | None | SRR3675383 | HR-TB | None | SRR3675486 | HR-TB | None | ERR4814536 | MDR-TB | lineage3;lineage2.1 | None |
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