Rv0676c - c.2520C>G
Drug resistance types
35 Sensitive
1 RR-TB
101 HR-TB
9 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
54 Other
lineage Counts
| lineage | Count |
|---|---|
| 115 | |
| lineage4.9 | 15 |
| La1.2 | 1 |
| lineage2 | 2 |
| lineage4 | 31 |
| lineage2.2 | 5 |
| lineage3.1.2.1 | 1 |
| lineage3 | 2 |
| lineage1.1.2 | 1 |
| lineage3.1.2 | 1 |
| lineage2.2.1 | 7 |
| lineage4.3.4 | 1 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage4.3.3 | 1 |
| lineage2.2.1.2 | 1 |
| lineage4.5 | 1 |
| lineage4;lineage2.2 | 1 |
| lineage4.9;lineage4.6.3 | 1 |
| lineage4.9;La3 | 1 |
| lineage6.3;lineage2.2.1 | 1 |
| lineage4.1.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.1.1.2 | 1 |
| lineage4.7 | 1 |
| La2 | 1 |
| lineage4.2.1 | 1 |
| lineage4.1 | 1 |
| lineage4.1.2 | 1 |
| lineage4.3.4.1 | 1 |
| lineage4.8 | 1 |
| La1 | 1 |
| La1.8.1 | 2 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 203 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR4407463 | HR-TB | None | ERR4188247 | HR-TB | None | ERR473323 | HR-TB | lineage4.9 | None | ERR4769497 | HR-TB | La1.2 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4769521 | HR-TB | None | ERR4796929 | Sensitive | lineage4 | None | ERR4810741 | HR-TB | None | ERR4799025 | Pre-XDR-TB | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4800102 | Sensitive | lineage3.1.2.1 | None | ERR4800341 | Other | lineage3 | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4797193 | HR-TB | lineage1.1.2 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4811142 | MDR-TB | None | ERR4811022 | HR-TB | None | ERR4811105 | HR-TB | None | ERR6866410 | Sensitive | None | ERR6358979 | Other | None | ERR702404 | HR-TB | None | ERR6866547 | Sensitive | lineage4 | None | ERR736848 | HR-TB | None | ERR702406 | HR-TB | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736865 | HR-TB | None | ERR736867 | HR-TB | None | ERR9117709 | HR-TB | None | ERR736875 | HR-TB | lineage4 | None | ERR736874 | HR-TB | None | ERR9634265 | Sensitive | None | ERR9119669 | HR-TB | None | SRR1172146 | Sensitive | lineage4.9 | None | ERR987722 | HR-TB | None | SRR10809074 | Sensitive | lineage4 | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | SRR10808805 | Sensitive | None | SRR1169194 | Other | None | SRR1173400 | Other | None | SRR1172857 | MDR-TB | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1172234 | Other | None | SRR1172310 | HR-TB | None | SRR1172728 | MDR-TB | None | SRR1172817 | HR-TB | None | SRR1172951 | Other | None | SRR1173153 | HR-TB | None | SRR11972456 | MDR-TB | lineage2.2.1 | None | SRR1173484 | Other | lineage4 | None | SRR1173778 | Other | None | SRR1173788 | Other | None | SRR1174897 | HR-TB | None | SRR1175074 | MDR-TB | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR1184294 | HR-TB | None | SRR1184381 | MDR-TB | None | SRR1184388 | Other | None | SRR1196546 | HR-TB | None | SRR1196566 | HR-TB | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173629 | Other | None | SRR1184380 | HR-TB | None | SRR1196768 | MDR-TB | None | SRR14088362 | Sensitive | lineage3 | None | SRR12416824 | HR-TB | None | SRR14801749 | Sensitive | None | SRR14782405 | HR-TB | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR15368973 | Other | None | SRR19303884 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | SRR19304036 | HR-TB | None | SRR20969731 | Other | lineage2.2.1 | None | SRR20970016 | Other | lineage2.2 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR25827682 | Other | None | SRR8692790 | RR-TB | lineage4 | None | SRR8692800 | Other | lineage4 | None | SRR8692879 | HR-TB | lineage4.9 | None | SRR8692905 | HR-TB | None | SRR8692887 | Other | None | SRR8692863 | Other | lineage4;lineage2.2 | None | SRR26159047 | Other | lineage4.9;lineage4.6.3 | None | SRR26399973 | Other | lineage4.9;La3 | None | ERR4815604 | HR-TB | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | SRR3675488 | HR-TB | None | ERR176793 | Other | lineage4.1.1 | None | ERR4814352 | HR-TB | lineage2.2.1 | None | SRR3675501 | HR-TB | None | SRR3675222 | Other | None | SRR3675571 | HR-TB | None | ERR176740 | HR-TB | None | SRR3675236 | HR-TB | None | SRR3675234 | Other | None | ERR176518 | Sensitive | lineage4.3.4.2.1 | None | ERR4816999 | Other | None | SRR3675555 | HR-TB | None | SRR3675574 | HR-TB | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR4816466 | HR-TB | None | SRR3742665 | HR-TB | None | ERR4819051 | Other | lineage4 | None | ERR234659 | HR-TB | None | ERR4818252 | Other | lineage4.1.1.2 | None | SRR5341302 | HR-TB | None | ERR4818615 | Other | None | ERR4819781 | Other | lineage2.2.1 | None | SRR5341456 | Other | None | SRR5341313 | HR-TB | None | SRR6045555 | HR-TB | None | ERR4819932 | Other | lineage4.7 | None | SRR5341330 | HR-TB | None | ERR2693231 | Other | None | ERR2693254 | Other | None | SRR6045526 | HR-TB | None | ERR2660539 | Other | lineage4.9 | None | ERR4821655 | Sensitive | lineage4 | None | SRR5341315 | Sensitive | None | SRR5341333 | HR-TB | None | SRR5341470 | HR-TB | None | ERR2693230 | Other | None | ERR2693257 | Other | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6046133 | HR-TB | None | SRR6044780 | Other | lineage4.9 | None | SRR6044897 | Sensitive | lineage4.9 | None | ERR2693232 | Other | lineage4.9 | None | SRR6044835 | Sensitive | lineage4 | None | ERR4830353 | Other | None | SRR6045010 | Other | lineage4 | None | SRR6045264 | Sensitive | lineage2.2.1 | None | SRR6045320 | Other | lineage4.9 | None | SRR6045327 | HR-TB | None | SRR6045217 | Other | lineage4 | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6046299 | HR-TB | None | SRR6046594 | HR-TB | lineage4 | None | SRR6046492 | Other | None | ERR4831117 | HR-TB | None | SRR6046878 | HR-TB | lineage4 | None | ERR502524 | HR-TB | La2 | None | SRR6785187 | Sensitive | lineage4.2.1 | None | SRR6789624 | MDR-TB | lineage4.1 | None | ERR502532 | HR-TB | None | ERR323053 | HR-TB | None | SRR9970978 | Sensitive | lineage4.1.2 | None | ERR323043 | HR-TB | None | ERR11466444 | Sensitive | lineage4.3.4.1 | None | ERR323039 | HR-TB | None | ERR1023525 | HR-TB | lineage4 | None | ERR323108 | HR-TB | lineage4 | None | ERR323107 | Other | lineage4 | None | ERR067699 | HR-TB | lineage4 | None | ERR1063857 | HR-TB | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR1063883 | Sensitive | lineage4 | None | ERR1063859 | HR-TB | None | ERR108471 | HR-TB | lineage4 | None | ERR11049020 | Other | lineage4.8 | None | ERR323115 | Sensitive | lineage4 | None | ERR3283021 | HR-TB | None | ERR3283010 | Other | La1 | None | ERR3283014 | HR-TB | None | ERR3283027 | HR-TB | None | ERR3283028 | Other | None | ERR3283024 | Other | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3283025 | HR-TB | None | ERR3283032 | HR-TB | None | ERR3283036 | HR-TB | None | ERR3283031 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3445504 | HR-TB | None | ERR3283047 | HR-TB | None | ERR3283057 | HR-TB | lineage4 | None | ERR349298 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR3797014 | Other | None | ERR363474 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR3797015 | HR-TB | None | ERR3797036 | HR-TB | None | ERR3797017 | Other | None | ERR3797046 | HR-TB | None | ERR3797081 | Sensitive | lineage4 | None | ERR3797048 | HR-TB | None | ERR3797065 | MDR-TB | lineage4 | None | ERR3797061 | Other | None | ERR3797063 | HR-TB | None | ERR3797079 | Sensitive | lineage4 | None | ERR3797064 | Sensitive | None | ERR3797044 | Other | None | ERR3797067 | Other | La1.8.1 | None | ERR3797069 | Other | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR3797087 | Sensitive | lineage4 | None | ERR387051 | HR-TB | None |
|---|
