Rv0668 - c.2604C>T
Drug resistance types
48 Sensitive
6 RR-TB
27 HR-TB
4 MDR-TB
7 Pre-XDR-TB
0 XDR-TB
17 Other
lineage Counts
| lineage | Count |
|---|---|
| La1.7.1 | 3 |
| lineage4 | 46 |
| lineage7;lineage2.2.1.2 | 1 |
| lineage4.9 | 10 |
| 21 | |
| lineage4.3 | 1 |
| lineage2.1 | 1 |
| lineage4.1.1 | 1 |
| lineage4.1.2.1 | 4 |
| lineage4.3.4.2 | 1 |
| lineage4.3.2.1 | 2 |
| La1.8.1 | 1 |
| lineage1.1.2 | 1 |
| lineage4.2.1 | 1 |
| lineage1.1.1.1 | 1 |
| lineage2.2 | 2 |
| La1.2 | 1 |
| lineage2.2.1 | 2 |
| lineage4.5 | 1 |
| lineage3 | 5 |
| lineage4.3.4.2.1 | 2 |
| La3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 109 |
Geographic prevalence
Country level data for this variant is available for 2 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | SRR1792478 | HR-TB | La1.7.1 | None | SRR3675265 | Other | lineage4 | None | SRR18549032 | HR-TB | lineage7;lineage2.2.1.2 | None | SRR3675209 | Sensitive | lineage4.9 | None | ERR176643 | HR-TB | None | ERR176568 | Other | lineage4.3 | None | ERR176751 | HR-TB | None | SRR3675292 | Sensitive | lineage4 | None | SRR3675527 | RR-TB | lineage4.9 | None | SRR5341422 | HR-TB | lineage2.1 | None | ERR4816113 | Sensitive | lineage4.1.1 | None | ERR212033 | HR-TB | None | ERR4816904 | Sensitive | lineage4.1.2.1 | None | ERR212034 | HR-TB | None | SAMN02380982 | MDR-TB | lineage4.3.4.2 | None | ERR4819383 | RR-TB | lineage4.9 | None | SRR5341373 | HR-TB | lineage4 | None | ERR2513724 | Sensitive | lineage4.3.2.1 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341456 | Other | None | SRR5431730 | Other | La1.8.1 | None | SRR5341293 | HR-TB | lineage4 | None | SRR5341330 | HR-TB | None | ERR2693238 | HR-TB | lineage4.9 | None | ERR4820942 | MDR-TB | lineage1.1.2 | None | SRR6046299 | HR-TB | None | SRR6045503 | HR-TB | None | ERR2693227 | Other | lineage4.9 | None | SRR6045706 | Sensitive | lineage4 | None | SRR6046259 | Sensitive | lineage4.9 | None | SRR6045050 | Sensitive | lineage4.3.2.1 | None | SRR6045371 | Sensitive | lineage4.2.1 | None | ERR2516453 | Pre-XDR-TB | La1.7.1 | nl | SRR6046362 | HR-TB | None | ERR2516545 | Pre-XDR-TB | La1.7.1 | nl | SRR6046802 | Other | lineage4 | None | ERR4828449 | Sensitive | lineage1.1.1.1 | None | SRR6046460 | HR-TB | None | SRR6046492 | Other | None | ERR3283055 | HR-TB | None | SRR8217918 | HR-TB | None | ERR323108 | HR-TB | lineage4 | None | SRR6046897 | Sensitive | lineage4 | None | ERR4831545 | Pre-XDR-TB | lineage2.2 | None | ERR3445504 | HR-TB | None | ERR349298 | Sensitive | lineage4 | None | ERR349264 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR349265 | Sensitive | lineage4 | None | ERR349296 | Sensitive | lineage4 | None | ERR349299 | Sensitive | lineage4 | None | ERR363449 | Sensitive | lineage4 | None | ERR349300 | Sensitive | lineage4.9 | None | ERR363426 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR363446 | Sensitive | lineage4 | None | ERR349330 | Sensitive | lineage4 | None | ERR363421 | Sensitive | lineage4 | None | ERR363445 | Sensitive | lineage4 | None | ERR363447 | Sensitive | lineage4 | None | ERR363499 | Sensitive | lineage4 | None | ERR363453 | Sensitive | lineage4 | None | ERR363456 | Sensitive | lineage4 | None | ERR363479 | Sensitive | lineage4 | None | ERR363474 | Sensitive | lineage4 | None | ERR6866807 | HR-TB | lineage4 | None | ERR363498 | Sensitive | lineage4 | None | ERR363500 | Sensitive | lineage4 | None | ERR363502 | Sensitive | lineage4 | None | ERR369162 | Sensitive | lineage4 | None | ERR369163 | Sensitive | lineage4 | None | ERR373945 | HR-TB | lineage4 | None | ERR3797046 | HR-TB | None | ERR3797081 | Sensitive | lineage4 | None | ERR4178226 | Sensitive | lineage4 | None | ERR4769427 | Other | La1.2 | None | ERR4769521 | HR-TB | None | ERR4798431 | HR-TB | None | ERR6865502 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR363506 | Sensitive | lineage4 | None | ERR363509 | Sensitive | lineage4 | None | ERR369158 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR369160 | Sensitive | lineage4.9 | None | ERR373946 | Sensitive | lineage4 | None | ERR373947 | Sensitive | lineage4 | None | ERR4178309 | Other | lineage4.1.2.1 | None | ERR4799547 | Sensitive | lineage2.2.1 | None | ERR4811493 | HR-TB | None | ERR6865513 | Other | lineage4.1.2.1 | None | ERR752229 | Other | lineage4.5 | None | SRR1049673 | Pre-XDR-TB | lineage3 | None | SRR1049559 | MDR-TB | lineage4.3.4.2.1 | None | SRR1049672 | Other | lineage3 | None | ERR7911670 | Pre-XDR-TB | lineage2.2 | None | SRR1062918 | Pre-XDR-TB | lineage3 | None | SRR1049725 | RR-TB | lineage4.1.2.1 | None | SRR1173281 | RR-TB | lineage3 | None | SRR1062928 | RR-TB | lineage4 | None | SRR1140736 | RR-TB | None | SRR1167384 | Other | lineage4 | None | SRR1169249 | Other | La3 | None | SRR1169306 | Other | None | SRR1173170 | Other | lineage4.9 | None | SRR1140716 | Pre-XDR-TB | lineage3 | None | SRR1140753 | MDR-TB | lineage4.3.4.2.1 | None | SRR12142339 | HR-TB | lineage2.2.1 | None | SRR1173740 | Other | None |
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