Rv1908c - c.417C>G
Drug resistance types
6 Sensitive
2 RR-TB
81 HR-TB
13 MDR-TB
8 Pre-XDR-TB
0 XDR-TB
52 Other
lineage Counts
| lineage | Count |
|---|---|
| 80 | |
| La1 | 2 |
| La1.8.1 | 2 |
| lineage4.9 | 16 |
| lineage2 | 3 |
| lineage3 | 2 |
| lineage3.1.2 | 1 |
| lineage4.6.1.1 | 1 |
| lineage4.3.4 | 1 |
| lineage4 | 11 |
| lineage1.1.3.2 | 1 |
| lineage1.1.2 | 2 |
| lineage3.1.2.2;lineage3.1.2.1 | 1 |
| lineage4.1.2.1 | 2 |
| lineage4.4.1.1 | 2 |
| lineage4.3.3 | 3 |
| lineage3.1 | 2 |
| lineage2.2.1 | 6 |
| lineage4.5 | 1 |
| La1.7.1 | 1 |
| lineage2.1 | 2 |
| lineage4.8 | 4 |
| lineage6.3;lineage2.2.1 | 1 |
| lineage4.9;La3 | 1 |
| lineage3;lineage2.2.1 | 1 |
| lineage4.1.1 | 1 |
| lineage4.3.4.2.1 | 1 |
| lineage4.8;La3 | 1 |
| lineage2.2 | 1 |
| lineage4;lineage1.1.2 | 1 |
| lineage4.1;lineage1 | 1 |
| lineage4.1.2 | 1 |
| lineage4.2.2.2 | 1 |
| lineage4;lineage1.1 | 1 |
| lineage4.7 | 1 |
| lineage4.6.1 | 1 |
| lineage1.2.2.2 | 1 |
| La2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 162 |
Geographic prevalence
Country level data for this variant is available for 3 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3283027 | HR-TB | None | ERR3283010 | Other | La1 | None | ERR3797073 | HR-TB | La1.8.1 | None | ERR3283036 | HR-TB | None | ERR3797069 | Other | None | ERR4798262 | HR-TB | La1 | None | ERR4407463 | HR-TB | None | ERR473334 | HR-TB | lineage4.9 | None | ERR4797054 | Pre-XDR-TB | lineage2 | None | ERR4797588 | MDR-TB | lineage3 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4811105 | HR-TB | None | ERR4800341 | Other | lineage3 | None | ERR4810741 | HR-TB | None | ERR4811022 | HR-TB | None | ERR4811142 | MDR-TB | None | ERR736831 | HR-TB | lineage4.9 | None | ERR5336148 | Other | None | ERR702404 | HR-TB | None | ERR6358755 | Other | lineage4.6.1.1 | None | ERR702406 | HR-TB | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736874 | HR-TB | None | ERR736837 | Other | lineage4.9 | None | ERR736865 | HR-TB | None | ERR736867 | HR-TB | None | ERR736875 | HR-TB | lineage4 | None | ERR7821123 | Other | lineage1.1.3.2 | None | ERR9117721 | HR-TB | lineage1.1.2 | None | ERR9117709 | HR-TB | None | SRR1169194 | Other | None | ERR987729 | HR-TB | lineage3.1.2.2;lineage3.1.2.1 | None | ERR9786421 | Other | lineage4.1.2.1 | None | ERR987722 | HR-TB | None | SRR1172817 | HR-TB | None | SRR1172234 | Other | None | SRR1172728 | MDR-TB | None | SRR1172310 | HR-TB | None | SRR1172844 | MDR-TB | lineage4.4.1.1 | None | SRR1172951 | Other | None | SRR1172857 | MDR-TB | None | SRR1173384 | Other | lineage4 | None | SRR1173153 | HR-TB | None | SRR1173363 | HR-TB | None | SRR1173118 | Other | None | SRR1173218 | Pre-XDR-TB | lineage4.3.3 | None | SRR1173633 | HR-TB | lineage4.9 | None | SRR1173484 | Other | lineage4 | None | SRR1173400 | Other | None | SRR1173562 | HR-TB | lineage4 | None | SRR1173778 | Other | None | SRR1173706 | Other | lineage4.9 | None | SRR1173629 | Other | None | SRR1173788 | Other | None | SRR1175049 | RR-TB | None | SRR1174897 | HR-TB | None | SRR1175074 | MDR-TB | None | SRR1184346 | HR-TB | lineage3.1 | None | SRR1184294 | HR-TB | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR1184312 | HR-TB | lineage2.2.1 | None | SRR1184380 | HR-TB | None | SRR1184372 | MDR-TB | None | SRR1184381 | MDR-TB | None | SRR1196546 | HR-TB | None | SRR1196474 | HR-TB | lineage3.1 | None | SRR1184388 | Other | None | SRR1196494 | MDR-TB | None | SRR1196566 | HR-TB | None | SRR1196677 | HR-TB | lineage2 | None | SRR1196571 | Pre-XDR-TB | lineage4.3.3 | None | SRR18213713 | HR-TB | lineage4.5 | None | SRR1196768 | MDR-TB | None | SRR12142341 | HR-TB | None | SRR13837502 | Sensitive | lineage4.9 | None | SRR15368973 | Other | None | SRR25827687 | MDR-TB | lineage1.1.2 | None | SRR1792478 | HR-TB | La1.7.1 | None | SRR12416824 | HR-TB | None | SRR1710057 | Other | lineage2.1 | None | SRR19303884 | HR-TB | None | SRR19304036 | HR-TB | None | SRR20969677 | HR-TB | lineage2 | None | SRR25827682 | Other | None | ERR8025523 | Pre-XDR-TB | lineage2.2.1 | None | ERR11081257 | Other | lineage4.8 | None | SRR28119811 | Other | lineage6.3;lineage2.2.1 | None | SRR26399973 | Other | lineage4.9;La3 | None | SRR25827497 | Pre-XDR-TB | lineage3;lineage2.2.1 | None | ERR176793 | Other | lineage4.1.1 | None | ERR4815604 | HR-TB | None | SRR3675311 | Other | None | SRR3675465 | HR-TB | None | ERR4814352 | HR-TB | lineage2.2.1 | None | ERR161034 | Other | lineage4.3.4.2.1 | None | SRR3416776 | Other | lineage2.1 | None | SRR3675221 | HR-TB | None | SRR3675236 | HR-TB | None | ERR181824 | HR-TB | lineage4 | None | ERR176740 | HR-TB | None | ERR4816999 | Other | None | ERR2229542 | Other | lineage4.8 | None | ERR212034 | HR-TB | None | ERR2027263 | Other | lineage4 | None | ERR212001 | HR-TB | None | SRR3675572 | Other | None | ERR4817060 | RR-TB | None | ERR4817896 | HR-TB | lineage2.2.1 | None | SRR3675571 | HR-TB | None | ERR4816559 | MDR-TB | lineage4.4.1.1 | None | ERR4817893 | Other | lineage4.8;La3 | None | ERR216965 | HR-TB | lineage4.9 | None | SRR3742665 | HR-TB | None | ERR4816585 | Other | lineage2.2 | None | ERR4817692 | HR-TB | lineage4;lineage1.1.2 | None | ERR4818021 | Other | La1.8.1 | None | ERR4819068 | Sensitive | lineage4.1;lineage1 | None | ERR234659 | HR-TB | None | ERR4818536 | Other | lineage4.9 | None | ERR4818347 | Other | lineage4.1.2 | None | ERR4818394 | Other | lineage4.9 | None | ERR2513470 | Other | lineage4.2.2.2 | None | ERR4818615 | Other | None | ERR4820854 | Other | lineage4.1.2.1 | None | ERR3275201 | Sensitive | lineage4.8 | nl | ERR4819322 | Other | lineage4;lineage1.1 | None | ERR4819932 | Other | lineage4.7 | None | ERR4819462 | Other | lineage4 | None | ERR4819781 | Other | lineage2.2.1 | None | SRR5341302 | HR-TB | None | SRR5341470 | HR-TB | None | SRR5341333 | HR-TB | None | ERR2446570 | Sensitive | lineage4.8 | nl | SRR6045795 | HR-TB | lineage2.2.1 | None | SRR6046482 | HR-TB | None | SRR6044790 | HR-TB | None | SRR6044875 | HR-TB | lineage4.9 | None | SRR6046066 | HR-TB | None | SRR6046305 | Other | lineage4.9 | None | ERR3078008 | MDR-TB | lineage4.6.1 | None | SRR6046540 | HR-TB | None | ERR4800001 | Sensitive | lineage1.2.2.2 | in | ERR323043 | HR-TB | None | SRR6789626 | Other | None | ERR294266 | HR-TB | None | ERR502524 | HR-TB | La2 | None | SRR8217918 | HR-TB | None | SRR7585435 | Other | lineage4.9 | None | ERR323037 | HR-TB | lineage4 | None | ERR502532 | HR-TB | None | SRR7535086 | Other | None | ERR323039 | HR-TB | None | ERR323108 | HR-TB | lineage4 | None | ERR323048 | Pre-XDR-TB | lineage4.9 | None | ERR1034634 | HR-TB | None | ERR037234 | Sensitive | lineage4.9 | None | ERR1023525 | HR-TB | lineage4 | None | ERR1063862 | HR-TB | None | ERR108471 | HR-TB | lineage4 | None | ERR1035157 | Other | lineage4.9 | None | ERR1063858 | HR-TB | None | ERR108125 | Pre-XDR-TB | lineage4.9 | None |
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