lineage | Count |
---|---|
57 | |
lineage4 | 48 |
lineage4.9 | 10 |
lineage4.1.3 | 1 |
lineage4.2.2.1 | 1 |
lineage2.2.1 | 6 |
lineage4.2.2.2 | 3 |
lineage3 | 2 |
lineage4.1.2 | 3 |
lineage4.1.2.1 | 2 |
lineage3.1.1 | 2 |
lineage4.4.1.2 | 1 |
lineage4.3.2 | 1 |
lineage4.3.4.1 | 1 |
lineage4;lineage3.1 | 1 |
La1.2 | 2 |
lineage3.1.2 | 1 |
lineage2.2 | 4 |
lineage4.3.4 | 1 |
lineage2.2.1.2 | 1 |
lineage4.8 | 1 |
spoligotype | Count |
---|---|
None | 149 |
ID | Drug resistance | Lineage | Country iso2 | ERR176778 | HR-TB | None | ERR181824 | HR-TB | lineage4 | None | ERR176779 | HR-TB | None | SRR3675229 | Other | lineage4 | None | SRR3675246 | Sensitive | lineage4 | None | SRR3675247 | Other | lineage4.9 | None | ERR552705 | Sensitive | lineage4.1.3 | de | SRR3675270 | HR-TB | None | SRR3675522 | Other | None | ERR176651 | HR-TB | None | SRR3675279 | Other | None | ERR181887 | HR-TB | None | ERR176740 | HR-TB | None | ERR4818110 | Sensitive | lineage4.9 | None | ERR212125 | HR-TB | lineage4 | None | ERR4819051 | Other | lineage4 | None | SRR5341400 | HR-TB | lineage4 | None | SRR5341373 | HR-TB | lineage4 | None | ERR551818 | Sensitive | lineage4.2.2.1 | de | SRR5341293 | HR-TB | lineage4 | None | SRR5341432 | HR-TB | lineage4 | None | SRR5341313 | HR-TB | None | SRR5341299 | Sensitive | lineage4 | None | SRR5341303 | RR-TB | lineage4 | None | SRR5341308 | Sensitive | lineage4 | None | SRR5341315 | Sensitive | None | SRR5341469 | Other | lineage4 | None | SRR5341330 | HR-TB | None | SRR5341456 | Other | None | SRR5818573 | Sensitive | lineage2.2.1 | dj | SRR5341470 | HR-TB | None | SRR5535933 | HR-TB | None | SRR5818581 | MDR-TB | lineage4.2.2.2 | dj | SRR5818602 | MDR-TB | lineage3 | dj | SRR5818678 | HR-TB | lineage3 | dj | SRR5818601 | MDR-TB | lineage4.2.2.2 | dj | SRR5818682 | RR-TB | lineage4.1.2 | None | SRR5818673 | Other | lineage4.2.2.2 | dj | SRR5818681 | Sensitive | lineage4.1.2.1 | dj | SRR6045010 | Other | lineage4 | None | SRR5818701 | Sensitive | lineage4.1.2.1 | dj | SRR6044780 | Other | lineage4.9 | None | SRR5818683 | Sensitive | lineage3.1.1 | dj | SRR6045892 | Sensitive | None | SRR6045217 | Other | lineage4 | None | SRR6045053 | Other | None | SRR9970978 | Sensitive | lineage4.1.2 | None | SRR6046046 | Other | None | ERR502510 | Sensitive | lineage4 | None | SRR6046299 | HR-TB | None | ERR4828783 | MDR-TB | lineage2.2.1 | None | ERR4831117 | HR-TB | None | ERR323108 | HR-TB | lineage4 | None | ERR323039 | HR-TB | None | ERR323053 | HR-TB | None | ERR323056 | HR-TB | lineage4.4.1.2 | None | SRR7781500 | MDR-TB | lineage2.2.1 | None | ERR323045 | HR-TB | None | ERR323107 | Other | lineage4 | None | ERR323085 | Sensitive | lineage4 | None | ERR1023525 | HR-TB | lineage4 | None | ERR067699 | HR-TB | lineage4 | None | ERR1063857 | HR-TB | None | ERR1035122 | Sensitive | None | ERR1034634 | HR-TB | None | ERR1063883 | Sensitive | lineage4 | None | ERR1063862 | HR-TB | None | ERR1063858 | HR-TB | None | ERR1063859 | HR-TB | None | ERR1213871 | HR-TB | lineage4.3.2 | None | ERR1193841 | Sensitive | lineage4.3.4.1 | pt | ERR323115 | Sensitive | lineage4 | None | ERR133825 | Sensitive | lineage4 | None | ERR137286 | Sensitive | lineage4 | None | ERR3273109 | MDR-TB | lineage4 | None | ERR3283055 | HR-TB | None | ERR3283021 | HR-TB | None | ERR3283025 | HR-TB | None | ERR3283040 | HR-TB | None | ERR3283030 | HR-TB | lineage4.9 | None | ERR3445501 | HR-TB | None | ERR3445504 | HR-TB | None | ERR349296 | Sensitive | lineage4 | None | ERR349266 | Sensitive | lineage4.9 | None | ERR3445502 | HR-TB | lineage4 | None | ERR3445503 | HR-TB | None | ERR369160 | Sensitive | lineage4.9 | None | ERR363499 | Sensitive | lineage4 | None | ERR363490 | Sensitive | lineage4 | None | ERR369158 | Sensitive | lineage4 | None | ERR369159 | Sensitive | lineage4 | None | ERR363426 | Sensitive | lineage4 | None | ERR363437 | Sensitive | lineage4 | None | ERR3797046 | HR-TB | None | ERR373946 | Sensitive | lineage4 | None | ERR3797015 | HR-TB | None | ERR3797063 | HR-TB | None | ERR3797086 | Other | lineage4.9 | None | ERR3797080 | HR-TB | lineage4.9 | None | ERR400320 | Sensitive | lineage4 | None | ERR4423610 | MDR-TB | lineage4.1.2 | None | ERR4024991 | Other | None | ERR400336 | Sensitive | lineage4 | None | ERR405219 | HR-TB | lineage4;lineage3.1 | None | ERR4769452 | HR-TB | None | ERR4423654 | MDR-TB | lineage3.1.1 | None | ERR4798431 | HR-TB | None | ERR4769450 | HR-TB | None | ERR4769497 | HR-TB | La1.2 | None | ERR4796254 | Sensitive | lineage4 | None | ERR4797184 | Sensitive | lineage4 | None | ERR4797264 | Sensitive | None | ERR4769474 | HR-TB | lineage4 | None | ERR4769521 | HR-TB | None | ERR4772210 | Other | La1.2 | None | ERR4799478 | Pre-XDR-TB | lineage2.2.1 | None | ERR4798648 | HR-TB | lineage3.1.2 | None | ERR4799025 | Pre-XDR-TB | None | ERR4810624 | HR-TB | lineage2.2 | None | ERR4799513 | HR-TB | lineage2.2 | None | ERR4811030 | Sensitive | None | ERR4811493 | HR-TB | None | ERR4812155 | Sensitive | None | ERR736872 | Sensitive | lineage4 | None | ERR6866807 | HR-TB | lineage4 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR736865 | HR-TB | None | ERR6358979 | Other | None | ERR6866022 | Other | None | ERR6866547 | Sensitive | lineage4 | None | ERR736834 | Sensitive | lineage4 | None | SRR1174897 | HR-TB | None | ERR751326 | Sensitive | lineage4 | None | ERR9119669 | HR-TB | None | SRR10808399 | Sensitive | lineage4 | None | SRR1173568 | Other | lineage4.9 | None | ERR736875 | HR-TB | lineage4 | None | SRR10808805 | Sensitive | None | SRR1172310 | HR-TB | None | SRR1175127 | Sensitive | lineage2.2.1.2 | None | SRR20969708 | HR-TB | lineage2.2 | None | SRR1180996 | HR-TB | lineage4 | None | SRR14801749 | Sensitive | None | SRR19295647 | Sensitive | lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | SRR14782405 | HR-TB | None | SRR15315962 | Sensitive | lineage2.2.1 | None | SRR20970016 | Other | lineage2.2 | None | ERR11081221 | Sensitive | lineage4.8 | None |
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