Rv3596c - c.1800A>G


Drug resistance types
45 Sensitive 5 RR-TB 38 HR-TB 15 MDR-TB 3 Pre-XDR-TB 0 XDR-TB 48 Other
lineage Counts
lineage Count
lineage4.9 77
La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 2
3
lineage2.1 2
lineage4.8 3
lineage2.1;lineage4.9 3
La2;lineage2.2 1
La3;M.canetti;lineage4.9 1
La1.8.1 3
lineage4.6.1.1 2
La2;lineage4.9 1
lineage2.2.1 10
lineage3 3
La1;lineage4.1.2 1
lineage6.1.3 3
lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 1
lineage4.8;lineage4.9 2
La1.3 1
lineage4.4.1.1.1 1
lineage2.2.1;lineage4.9 1
lineage4 2
M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 1
lineage2.2 1
M.canetti;lineage2.1;lineage4.9 1
lineage4.1.2 1
lineage3.1.2.1 1
La1.7;lineage4.9 3
lineage2.2.1.1 2
La3;lineage3 1
lineage4.4.1.1 1
lineage2.2;lineage4.9 1
La1.2;La1.8.1 1
lineage4.1.1.2 1
lineage4.3.2.1 1
La1;lineage4.9 1
lineage1.1.1 2
lineage3.1 1
lineage6.1.2 1
lineage2;lineage4 1
lineage4.6.2.2 1
lineage4.3.3 1
La1.7;lineage4.9;lineage7 3
lineage4.4.1.2 1
La1.7;lineage3;lineage4.9;lineage7 1
lineage3.1.3 1
La3;lineage2.1;lineage4.9;lineage6.3 1
spoligotype Counts
spoligotype Count
None 154
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
ID Drug resistance Lineage Country iso2
ERR4769444 HR-TB lineage4.9 None
SRR6045359 Sensitive lineage4.9 None
ERR736872 HR-TB lineage4.9 None
SRR1181403 Other lineage4.9 None
SRR6046460 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR1063896 Sensitive None
SRR1710057 Other lineage2.1 None
ERR2515230 Sensitive lineage4.8 None
SRR1173629 Other lineage2.1;lineage4.9 None
ERR1063839 MDR-TB La2;lineage2.2 None
SRR1173355 Other lineage4.9 None
SRR3416776 Other lineage2.1 None
ERR473277 HR-TB La3;M.canetti;lineage4.9 None
SRR1791747 Other La1.8.1 None
ERR4817667 HR-TB lineage4.8 None
ERR987765 Sensitive lineage4.6.1.1 None
ERR323107 Sensitive lineage4.9 None
ERR067712 Sensitive lineage4.9 None
ERR4798099 Other lineage4.9 None
ERR1063857 MDR-TB La2;lineage4.9 None
SRR10809074 Sensitive lineage4.9 None
SRR5341384 HR-TB lineage4.9 None
ERR4818561 Sensitive lineage4.9 None
ERR3797015 HR-TB lineage4.9 None
ERR6359074 HR-TB lineage4.9 None
SRR1184380 Other lineage2.1;lineage4.9 None
SRR6458423 HR-TB lineage2.2.1 None
SRR6511621 Sensitive lineage4.9 None
ERR4596902 MDR-TB lineage3 None
SRR12416842 HR-TB lineage4.9 None
SRR3675246 Other lineage4.9 None
SRR9970978 Sensitive La1;lineage4.1.2 None
ERR1023236 Other lineage6.1.3 None
SRR5341467 Other lineage4.9 None
SRR11972367 Sensitive lineage2.2.1 None
ERR6358991 HR-TB lineage4.8.1;lineage4.9;lineage6.1.3;lineage6.3 None
ERR4797264 Sensitive lineage4.9 None
ERR4815815 Sensitive lineage4.9 None
ERR4024991 Other lineage4.8;lineage4.9 None
ERR4769514 Other La1.3 None
SRR20632814 Sensitive lineage4.9 None
ERR6866022 Other lineage4.8;lineage4.9 None
SRR11349145 Pre-XDR-TB lineage4.4.1.1.1 None
SRR11462861 Other La1.8.1 None
ERR4796254 Sensitive lineage4.9 None
ERR4815310 Other lineage2.2.1;lineage4.9 None
SRR6045010 Sensitive lineage4.9 None
ERR323062 Sensitive lineage4.9 None
ERR4798823 HR-TB lineage4 None
SRR1172951 Other lineage4.9 None
ERR4816762 Sensitive lineage4.9 None
ERR1199132 Sensitive lineage4.6.1.1 None
ERR11252599 Other M.canetti;lineage4.2;lineage4.6.4;lineage4.8.1;lineage4.9;lineage6.2.3 None
ERR4810624 MDR-TB lineage2.2 None
SRR1180440 Other lineage4.9 None
SRR1184388 Other lineage2.1;lineage4.9 None
ERR502511 Sensitive lineage4.9 None
ERR4811022 HR-TB M.canetti;lineage2.1;lineage4.9 None
SRR9970980 HR-TB lineage4.1.2 None
ERR4816717 RR-TB lineage3.1.2.1 None
ERR323108 HR-TB La1.7;lineage4.9 None
SRR18909918 Other lineage2.2.1.1 None
SRR3618864 Pre-XDR-TB lineage2.2.1 None
ERR702405 Sensitive lineage4.9 None
ERR2513259 Other lineage3 None
ERR1023302 MDR-TB La3;lineage3 None
ERR5917972 MDR-TB lineage4.4.1.1 za
ERR4815550 Other lineage2.2;lineage4.9 None
ERR323115 Sensitive lineage4.9 None
ERR502510 Sensitive lineage4.9 None
ERR1063883 HR-TB lineage4.9 None
SRR7240033 Other La1.2;La1.8.1 None
ERR4818252 Sensitive lineage4.1.1.2 None
SRR22424787 Sensitive lineage4.9 None
ERR4769474 HR-TB lineage4.9 None
ERR124636 Sensitive lineage4.9 None
ERR216938 HR-TB La1.7;lineage4.9 None
SRR9970981 RR-TB lineage4.3.2.1 None
SRR10808805 Other La1;lineage4.9 None
ERR4814639 HR-TB lineage4.9 None
ERR751326 Other lineage4.9 None
ERR108471 HR-TB lineage4.9 None
ERR4816466 HR-TB lineage4.9 None
SRR5341453 Other lineage4.9 None
ERR6358951 Sensitive lineage4.9 None
ERR1035122 Sensitive lineage4.9 None
ERR6866639 Other lineage4.9 None
ERR4817554 Other lineage1.1.1 None
SRR1173400 Other lineage4.9 None
SRR1180446 Other lineage4.9 None
ERR1034634 HR-TB lineage4.9 None
ERR5311094 HR-TB lineage4.9 None
SRR1184346 HR-TB lineage3.1 None
ERR736834 Sensitive lineage4.9 None
ERR9787030 RR-TB lineage6.1.2 None
SRR9971112 Other lineage2.2.1 None
ERR1023502 MDR-TB lineage2;lineage4 None
SRR1184294 Other lineage4.9 None
SRR1184381 MDR-TB None
ERR4769442 Sensitive lineage4.9 None
ERR4797474 Sensitive lineage4.9 None
ERR4819809 HR-TB lineage4.6.2.2 None
ERR6866807 Other lineage4.9 None
SRR7236177 Other La1.8.1 None
ERR4819314 Other lineage1.1.1 None
ERR137286 Other lineage4.9 None
ERR323066 Sensitive lineage4.9 None
ERR3283040 HR-TB lineage4.9 None
SRR1196583 Other lineage4.9 None
ERR4769439 HR-TB lineage4.9 None
ERR4769417 Pre-XDR-TB lineage4.9 None
SRR6044875 Sensitive lineage4.9 None
SRR9971041 MDR-TB lineage4.3.3 None
ERR9787336 RR-TB lineage6.1.3 None
SRR5341313 Sensitive La1.7;lineage4.9;lineage7 None
SRR1062919 HR-TB lineage2.2.1 None
SRR5341432 Sensitive La1.7;lineage4.9;lineage7 None
SRR6046362 MDR-TB La3;lineage4.2;lineage4.6.3;lineage4.9;lineage9 None
ERR6358979 Other lineage4.9 None
ERR4831617 MDR-TB lineage2.2.1 None
ERR4799547 HR-TB lineage2.2.1 None
ERR4831616 MDR-TB lineage2.2.1 None
SRR3675235 Sensitive lineage4.9 None
ERR9787256 Other lineage6.1.3 None
ERR3283030 HR-TB lineage4.9 None
ERR4769521 RR-TB lineage4.9 None
SRR29096879 Sensitive lineage4.9 None
SRR11662694 Other lineage4.9 None
ERR4819051 Sensitive lineage4.9 None
ERR4797184 Sensitive lineage4.9 None
SRR10315567 HR-TB lineage2.2.1 None
SRR5341461 HR-TB lineage4.9 None
SRR1196546 Other lineage4.9 None
ERR3273109 HR-TB lineage4 None
ERR1023525 HR-TB La1.7;lineage4.9 None
ERR4819546 HR-TB lineage3 None
ERR323056 HR-TB lineage4.4.1.2 None
SRR5341308 Sensitive lineage4.9 None
SRR3675585 Sensitive lineage4.9 None
SRR5341315 Other La1.7;lineage3;lineage4.9;lineage7 None
SRR5341422 HR-TB La1.7;lineage4.9;lineage7 None
SRR5341299 HR-TB lineage4.9 None
ERR4818110 Sensitive lineage4.9 None
ERR4816151 Sensitive lineage4.8 None
SRR5341469 HR-TB lineage4.9 None
ERR4831621 MDR-TB lineage2.2.1.1 None
SRR1181256 Other lineage4.9 None
SRR1140724 Other lineage2.2.1 None
SRR18913742 Sensitive lineage3.1.3 None
SRR1196566 Other lineage4.9 None
SRR1173778 Other lineage4.9 None
SRR1196768 MDR-TB None
SRR29055611 Sensitive lineage4.9 None
SRR19304036 Other La3;lineage2.1;lineage4.9;lineage6.3 None