Rv0006 - c.1962C>T
Drug resistance types
26 Sensitive
0 RR-TB
25 HR-TB
1 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
17 Other
lineage Counts
| lineage | Count |
|---|---|
| 27 | |
| lineage4.1.1.3 | 1 |
| lineage4.8 | 9 |
| lineage4 | 10 |
| lineage2.2 | 1 |
| lineage4.9 | 13 |
| lineage4.6.2.2 | 2 |
| lineage4.5 | 1 |
| lineage6.1.3 | 1 |
| lineage2.2.1 | 4 |
| lineage4.8;lineage4.2.1.1 | 1 |
| lineage5.1.4 | 1 |
| lineage1.1.2 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 72 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR3797043 | HR-TB | None | SRR6982345 | Sensitive | lineage4.1.1.3 | None | SRR7646031 | Sensitive | lineage4.8 | None | SRR7755740 | Sensitive | lineage4.8 | None | ERR1063857 | HR-TB | None | ERR323108 | HR-TB | lineage4 | None | ERR1063839 | HR-TB | lineage2.2 | None | ERR3283025 | HR-TB | None | ERR3283041 | Other | lineage4.9 | None | ERR3283058 | Other | lineage4.9 | None | ERR4769450 | HR-TB | None | ERR3801503 | Sensitive | lineage4.6.2.2 | None | ERR400320 | Sensitive | lineage4 | None | ERR400345 | Other | lineage4 | None | ERR3797086 | Other | lineage4.9 | None | ERR4769452 | HR-TB | None | ERR4811031 | Sensitive | lineage4.5 | None | ERR4769521 | HR-TB | None | ERR4811030 | Sensitive | None | ERR6359045 | HR-TB | None | ERR4812155 | Sensitive | None | ERR736835 | HR-TB | None | ERR6866807 | HR-TB | lineage4 | None | ERR6866547 | Sensitive | lineage4 | None | SRR10380208 | Sensitive | lineage4.8 | None | ERR9786711 | Sensitive | lineage4.6.2.2 | None | SRR10380181 | Sensitive | lineage4.8 | None | ERR736848 | HR-TB | None | ERR736856 | HR-TB | lineage4 | None | ERR9787153 | Other | lineage6.1.3 | None | SRR12416840 | MDR-TB | lineage4.9 | None | SRR10380220 | Sensitive | lineage4.8 | None | SRR11972332 | HR-TB | lineage2.2.1 | None | SRR10808399 | Sensitive | lineage4 | None | SRR14782456 | Sensitive | lineage4.8 | None | SRR14782212 | Other | lineage4.8;lineage4.2.1.1 | None | SRR14801749 | Sensitive | None | SRR14782754 | Sensitive | lineage4.8 | None | SRR14801466 | Sensitive | lineage4.8 | None | ERR4896321 | Pre-XDR-TB | lineage2.2.1 | None | SRR19295647 | Sensitive | lineage4.9 | None | ERR9806969 | Pre-XDR-TB | lineage2.2.1 | None | ERR8025621 | Pre-XDR-TB | lineage2.2.1 | None | SRR3675247 | Other | lineage4.9 | None | SRR3675229 | Other | lineage4 | None | SRR3675477 | Other | lineage4.9 | None | SRR3675270 | HR-TB | None | ERR176643 | HR-TB | None | SRR3675279 | Other | None | ERR176751 | HR-TB | None | SRR3675387 | Sensitive | None | SRR3675541 | Sensitive | lineage4.9 | None | SRR3675455 | Sensitive | lineage4 | None | SRR3675514 | Sensitive | lineage4.9 | None | SRR3675522 | Other | None | SRR3675547 | Other | lineage4.9 | None | SRR3675574 | HR-TB | None | ERR2513283 | Other | lineage5.1.4 | None | ERR212121 | HR-TB | None | SRR3743387 | Sensitive | lineage4.8 | None | SRR6046141 | Other | lineage4.9 | None | ERR2514692 | Other | None | ERR4819839 | Sensitive | lineage1.1.2 | None | SRR6045503 | HR-TB | None | SRR6045526 | HR-TB | None | SRR6045327 | HR-TB | None | SRR6045832 | HR-TB | lineage4.9 | None | SRR6044819 | Sensitive | lineage4.9 | None | SRR6045053 | Other | None | SRR6045233 | HR-TB | None | SRR6046046 | Other | None | SRR6046878 | HR-TB | lineage4 | None |
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