Rv1484 - p.Leu134Thr
Note: the variant has been searched for in a non-representative convenience
dataset of samples from the ENA. This sampleset may contain overrepresentation
in certain categories such as geographic source, drug resistance type and
lineage. Interpretation of variant frequencies should be performed cautiously
with this in mind.
Drug resistance types
13 Sensitive
5 RR-TB
40 HR-TB
13 MDR-TB
3 Pre-XDR-TB
0 XDR-TB
123 Other
lineage Counts
| lineage | Count |
|---|---|
| lineage4.9 | 56 |
| lineage4.1.2.1 | 6 |
| 27 | |
| lineage4.9;lineage6.3 | 7 |
| lineage2.2.1 | 17 |
| lineage2.1;lineage4.9 | 14 |
| lineage4.3.3 | 2 |
| lineage2.1;lineage4.9;lineage6.3 | 6 |
| La1.2.BCG;La1.8.1 | 1 |
| M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | 1 |
| La3;M.canetti;lineage2.2.1 | 1 |
| La3;lineage2.1;lineage4.9 | 3 |
| lineage2.1;lineage6.3 | 2 |
| La3;lineage4.9 | 5 |
| La1.7;lineage4.9 | 4 |
| lineage4.3.4.2.1 | 1 |
| lineage4.3.4.2 | 1 |
| lineage4.1.1.1 | 1 |
| La1.7;lineage3.1;lineage4 | 1 |
| lineage4.1.2 | 2 |
| La1.7.1;La1.7.X-unk4 | 1 |
| lineage2.2.2;lineage4 | 1 |
| lineage4.1 | 1 |
| lineage4.6.2.2 | 2 |
| lineage4.8 | 3 |
| lineage4 | 4 |
| La1.7.1;lineage4.9 | 1 |
| La1.7.1 | 1 |
| La3 | 2 |
| lineage4.3.2.1 | 1 |
| La3;lineage2.2.1 | 1 |
| lineage4.8.1 | 1 |
| lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | 1 |
| lineage2.2 | 2 |
| La3;lineage2.1;lineage4.9;lineage6.3 | 1 |
| lineage2.2.1.2 | 1 |
| lineage4.3.4 | 1 |
| La2;lineage2.2 | 1 |
| M.canetti;lineage2.1;lineage4.9 | 2 |
| La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | 1 |
| La2;lineage4.9 | 1 |
| lineage4.6.1 | 1 |
| lineage3.1.1 | 1 |
| lineage3 | 1 |
| lineage4.1.1.3 | 2 |
| lineage2.1 | 2 |
| lineage1.1.3.1 | 1 |
| M.canetti;lineage2.1;lineage6.3 | 1 |
spoligotype Counts
| spoligotype | Count |
|---|---|
| None | 197 |
Geographic prevalence
Country level data for this variant is available for 0 isolates.
Statisctical support
Not enough data to calculate support.
Samples
| ID | Drug resistance | Lineage | Country iso2 | ERR181824 | HR-TB | lineage4.9 | None | ERR9786601 | Other | lineage4.1.2.1 | None | ERR9786671 | Other | None | SRR28119756 | Other | lineage4.9;lineage6.3 | None | ERR176778 | HR-TB | lineage4.9 | None | ERR4819781 | Other | lineage2.2.1 | None | SRR1184372 | MDR-TB | None | SRR3675572 | Other | None | SRR5341333 | Other | lineage2.1;lineage4.9 | None | SRR6045380 | Other | lineage2.1;lineage4.9 | None | ERR13265528 | Other | lineage4.9;lineage6.3 | None | ERR6866807 | Other | lineage4.9 | None | SRR21732980 | Other | lineage4.3.3 | None | SRR3675465 | Other | lineage4.9;lineage6.3 | None | ERR1063858 | HR-TB | lineage4.9 | None | SRR6045242 | Other | lineage2.1;lineage4.9 | None | ERR3283036 | Other | lineage2.1;lineage4.9 | None | SRR1172951 | Other | lineage4.9 | None | ERR3283027 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1173778 | Other | lineage4.9 | None | ERR4818021 | Other | La1.2.BCG;La1.8.1 | None | SRR1196768 | MDR-TB | None | ERR176651 | Other | lineage4.9 | None | ERR11252736 | Other | lineage4.9 | None | SRR3742665 | HR-TB | M.canetti;lineage2.1;lineage2.2.1;lineage4.9;lineage6.3 | None | SRR3742657 | Pre-XDR-TB | La3;M.canetti;lineage2.2.1 | None | SRR1184388 | Other | lineage2.1;lineage4.9 | None | ERR736874 | Other | La3;lineage2.1;lineage4.9 | None | SRR1173629 | Other | lineage2.1;lineage4.9 | None | SRR1184298 | Pre-XDR-TB | lineage4.3.3 | None | SRR19303884 | Other | lineage2.1;lineage6.3 | None | SRR1169194 | Other | lineage4.9 | None | SRR6044790 | Other | lineage2.1;lineage4.9 | None | SRR1165628 | Other | La3;lineage4.9 | None | SRR14801759 | HR-TB | La1.7;lineage4.9 | None | SRR3675467 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR15368973 | Other | lineage4.9 | None | ERR161034 | Other | lineage4.3.4.2.1 | None | ERR176549 | Other | lineage4.3.4.2 | None | ERR1035157 | Other | lineage4.9 | None | SRR14782054 | Other | lineage4.9 | None | ERR176793 | Other | lineage4.1.1.1 | None | ERR181887 | Other | lineage4.9 | None | ERR502510 | Sensitive | lineage4.9 | None | SRR29016901 | Other | La3;lineage4.9 | None | SRR6045347 | Other | lineage4.9 | None | ERR4800341 | Other | None | ERR405219 | HR-TB | La1.7;lineage3.1;lineage4 | None | ERR4816999 | Other | None | ERR4818347 | Other | lineage4.1.2 | None | ERR4810741 | HR-TB | None | ERR502912 | Other | lineage2.2.1 | None | ERR124636 | Sensitive | lineage4.9 | None | ERR3445503 | Other | La1.7.1;La1.7.X-unk4 | None | ERR216938 | HR-TB | La1.7;lineage4.9 | None | ERR4798493 | MDR-TB | lineage2.2.1 | None | ERR4811075 | Other | None | ERR4811311 | Other | None | SRR28119753 | Other | lineage4.9 | None | SRR29093105 | Other | lineage2.2.2;lineage4 | None | SRR1196546 | Other | lineage4.9 | None | ERR9786526 | Other | lineage4.1 | None | SRR1184380 | Other | lineage2.1;lineage4.9 | None | ERR4817896 | HR-TB | lineage2.2.1 | None | ERR4872119 | MDR-TB | lineage4.6.2.2 | None | ERR9786569 | Other | lineage4.8 | None | SRR29093909 | Other | lineage4.9 | None | ERR9786525 | Other | lineage4 | None | ERR9786656 | Sensitive | lineage4.1.2.1 | None | ERR1063862 | HR-TB | lineage4.9 | None | ERR3273109 | HR-TB | lineage4 | None | SRR12142341 | HR-TB | lineage2.2.1 | None | ERR1063859 | HR-TB | La1.7.1;lineage4.9 | None | ERR4817893 | Other | lineage4.8 | None | ERR212138 | HR-TB | lineage4.9 | None | ERR9119525 | MDR-TB | lineage4.6.2.2 | None | SRR1792478 | HR-TB | La1.7.1 | None | ERR13265748 | Other | lineage4.9;lineage6.3 | None | SRR20969708 | HR-TB | lineage2.2.1 | None | ERR4816585 | Other | lineage2.2.1 | None | SRR1172728 | RR-TB | La3 | None | ERR1035122 | Sensitive | lineage4.9 | None | SRR12416842 | HR-TB | lineage4.9 | None | ERR176643 | Other | La3;lineage4.9 | None | SRR6458423 | HR-TB | lineage2.2.1 | None | SRR9970981 | RR-TB | lineage4.3.2.1 | None | ERR9117709 | Other | None | SRR1172234 | Other | lineage4.9 | None | SRR29055629 | MDR-TB | lineage2.2.1 | None | ERR3797086 | Sensitive | lineage4.9 | None | SRR9970980 | Other | lineage4.1.2 | None | SRR26937071 | MDR-TB | La3;lineage2.2.1 | None | SRR12708389 | MDR-TB | lineage4.8.1 | None | ERR1334034 | Other | lineage2.1;lineage6.1.3;lineage6.2.3;lineage6.3 | None | ERR4799513 | HR-TB | lineage2.2 | None | SRR29016780 | Other | lineage4.9 | None | ERR212125 | HR-TB | lineage4.9 | None | SRR1184294 | Other | lineage4.9 | None | ERR12268442 | Other | lineage4.1.2.1 | None | ERR3804155 | Other | lineage4.1.2.1 | None | SRR11662690 | HR-TB | lineage4.9 | None | ERR3797070 | Other | lineage4.9 | None | ERR9786642 | Other | lineage4.1.2.1 | None | SRR1173118 | Other | lineage2.2.1 | None | ERR9787197 | Other | None | SRR28119805 | Other | lineage4.9 | None | ERR736875 | HR-TB | lineage4.9 | None | ERR9786604 | Other | None | SRR1165667 | Other | lineage4.9;lineage6.3 | None | SRR1167384 | Other | La3;lineage4.9 | None | ERR4407463 | HR-TB | None | SRR1180137 | Other | lineage2.2.1 | None | SRR19304036 | Other | La3;lineage2.1;lineage4.9;lineage6.3 | None | SRR3675508 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR1196583 | Other | lineage4.9 | None | SRR6046540 | Other | lineage2.1;lineage4.9 | None | SRR28119717 | Other | lineage4.9;lineage6.3 | None | ERR4797054 | Pre-XDR-TB | lineage2.2.1.2 | None | ERR736817 | HR-TB | lineage4.3.4 | None | ERR176568 | HR-TB | La3;lineage2.1;lineage4.9 | None | ERR3283019 | Other | lineage2.1;lineage4.9 | None | ERR736871 | HR-TB | lineage2.1;lineage4.9;lineage6.3 | None | ERR4815604 | Other | None | ERR1063839 | MDR-TB | La2;lineage2.2 | None | SRR1183049 | RR-TB | lineage2.2 | None | ERR4811022 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | ERR3797069 | Other | lineage4.9 | None | SRR1172844 | Sensitive | lineage4.9 | None | ERR9119669 | HR-TB | lineage4.9 | None | ERR323108 | HR-TB | La1.7;lineage4.9 | None | SRR3675529 | Other | lineage2.1;lineage4.9;lineage6.3 | None | SRR6045548 | Sensitive | lineage4.9 | None | ERR736863 | HR-TB | La3;M.canetti;lineage2.1;lineage4.9;lineage6.3 | None | SRR1196494 | MDR-TB | None | ERR4799025 | Other | lineage4.8 | None | SRR6046492 | Other | lineage4.9 | None | ERR1063857 | MDR-TB | La2;lineage4.9 | None | SRR1184312 | Other | lineage2.2.1 | None | SRR1169249 | Other | lineage4.9 | None | SRR6046066 | Other | lineage4.9 | None | SRR3675216 | Other | lineage2.1;lineage4.9 | None | ERR4769521 | RR-TB | lineage4.9 | None | SRR1169306 | Other | La3;lineage4.9 | None | SRR16156817 | Other | lineage4.9 | None | ERR2027263 | Other | lineage4 | None | SRR29096879 | Sensitive | lineage4.9 | None | ERR4797201 | Other | None | SRR6789626 | Other | None | ERR4811105 | HR-TB | None | ERR4810624 | HR-TB | lineage2.2.1 | None | ERR6358755 | Other | lineage4.6.1 | None | ERR4811142 | RR-TB | None | SRR1196474 | Other | lineage3.1.1 | None | ERR4820854 | Other | lineage4.1.2.1 | None | ERR990545 | Other | lineage3 | None | SRR3675236 | Other | None | SRR3675524 | Other | lineage4.9;lineage6.3 | None | SRR12006550 | Sensitive | None | SRR12416824 | HR-TB | None | ERR176779 | HR-TB | lineage4.9 | None | ERR3283044 | Other | lineage4 | None | ERR9117721 | HR-TB | None | SRR29096659 | Sensitive | lineage4.9 | None | SRR1165699 | Other | lineage4.9 | None | ERR11465025 | Other | lineage4.1.1.3 | None | SRR26159035 | Sensitive | lineage4.9 | None | SRR20970016 | Other | lineage2.2.1 | None | SRR20969677 | HR-TB | lineage2.1 | None | SRR28119777 | Other | lineage4.9 | None | ERR736859 | HR-TB | M.canetti;lineage2.1;lineage4.9 | None | SRR20969731 | Other | lineage2.2.1 | None | ERR702406 | Other | lineage2.1 | None | ERR1063849 | HR-TB | lineage4.9 | None | ERR8479578 | Sensitive | lineage1.1.3.1 | None | SRR14782405 | HR-TB | lineage4.9 | None | ERR5336148 | Other | lineage2.1;lineage6.3 | None | SRR1172817 | Other | La3 | None | SRR1173400 | Other | lineage4.9 | None | SRR3675581 | Other | lineage2.1;lineage4.9 | None | SRR28119811 | Other | lineage2.2.1 | None | ERR736867 | Other | lineage2.1;lineage4.9 | None | ERR176751 | Other | lineage4.9 | None | SRR5341302 | Other | La3;lineage2.1;lineage4.9 | None | ERR502532 | Other | M.canetti;lineage2.1;lineage6.3 | None | ERR323043 | Other | lineage2.1;lineage4.9 | None | ERR4769452 | Other | lineage4.9 | None | ERR779852 | Sensitive | lineage4.9 | None | SRR3675490 | Other | lineage2.1;lineage4.9;lineage6.3 | None | ERR6359082 | Other | lineage4.9 | None | ERR3283025 | MDR-TB | La1.7;lineage4.9 | None | ERR9786843 | Other | None | SRR1184381 | MDR-TB | None | ERR212001 | HR-TB | None | ERR212033 | Other | lineage4.9 | None | ERR234659 | Other | None | ERR4814352 | Other | lineage2.2.1 | None | ERR11465024 | Other | lineage4.1.1.3 | None |
|---|
